Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14924 Striga asiatica HOM05D004131 ORTHO05D004778 3.1e-110 402.1 254 100.0
MSTRG.24561 Avicennia marina HOM05D004131 ORTHO05D004778 4.4e-24 115.9 262 51.9
Sabra17G0009400 Salix brachista HOM05D004131 ORTHO05D004778 2.7e-21 106.7 284 44.4
Ciclev10022332m.g Citrus clementina HOM05D004131 ORTHO05D004778 1.3e-20 104.4 252 50.0
TWI63G0908 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 2.3e-20 103.6 252 45.6
TAR636G2398 Trochodendron aralioides HOM05D004131 ORTHO05D004778 5.1e-20 102.4 254 40.9
Migut.N03052 Erythranthe guttata HOM05D004131 ORTHO05D004778 1.1e-19 101.3 252 46.0
Atru.chr4.1513 Acer truncatum HOM05D004131 ORTHO05D004778 2.5e-19 100.1 252 44.8
Potri.017G010100 Populus trichocarpa HOM05D004131 ORTHO05D004778 2.5e-19 100.1 254 45.7
Actinidia18408 Actinidia chinensis HOM05D004131 ORTHO05D004778 3.3e-19 99.8 264 45.1
Migut.G00833 Erythranthe guttata HOM05D004131 ORTHO05D004778 7.3e-19 98.6 253 51.0
Duzib268G1863 Durio zibethinus HOM05D004131 ORTHO05D004778 2.1e-18 97.1 158 43.0
ECA130G0002 Erigeron canadensis HOM05D004131 ORTHO05D004778 2.8e-18 96.7 163 41.7
Nn7g37517 Nelumbo nucifera HOM05D004131 ORTHO05D004778 2.8e-18 96.7 252 48.0
SalBow6G7192 Salvia bowleyana HOM05D004131 ORTHO05D004778 3.6e-18 96.3 252 48.8
Dinv33225 Davidia involucrata HOM05D004131 ORTHO05D004778 4.8e-18 95.9 161 41.0
Gorai.011G132700 Gossypium raimondii HOM05D004131 ORTHO05D004778 4.8e-18 95.9 148 44.6
Sabra07G0113200 Salix brachista HOM05D004131 ORTHO05D004778 4.8e-18 95.9 254 45.3
Potri.007G139900 Populus trichocarpa HOM05D004131 ORTHO05D004778 6.2e-18 95.5 254 44.1
Prupe.7G267400 Prunus persica HOM05D004131 ORTHO05D004778 6.2e-18 95.5 115 52.2
Solyc12g019470.2 Solanum lycopersicum HOM05D004131 ORTHO05D004778 6.2e-18 95.5 252 49.2
unitig_8.g3637 Utricularia gibba HOM05D004131 ORTHO05D004778 6.2e-18 95.5 148 45.3
SalBow3G2571 Salvia bowleyana HOM05D004131 ORTHO05D004778 8.1e-18 95.1 115 50.4
THA.LOC104804159 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 8.1e-18 95.1 115 50.4
Gohir.A10G146200 Gossypium hirsutum HOM05D004131 ORTHO05D004778 1.1e-17 94.7 148 43.9
Gohir.D10G120800 Gossypium hirsutum HOM05D004131 ORTHO05D004778 1.1e-17 94.7 148 43.9
Lsat_1_v5_gn_7_67880 Lactuca sativa HOM05D004131 ORTHO05D004778 1.1e-17 94.7 254 45.7
MBI07_g36705_MAGBIO Magnolia biondii HOM05D004131 ORTHO05D004778 1.4e-17 94.4 115 47.8
Manes.01G017500 Manihot esculenta HOM05D004131 ORTHO05D004778 1.4e-17 94.4 252 48.8
Sabra07G0117600 Salix brachista HOM05D004131 ORTHO05D004778 1.4e-17 94.4 254 45.3
TWI38G2196 Tripterygium wilfordii HOM05D004131 ORTHO05D004778 1.4e-17 94.4 115 50.4
CAN.G448.4 Capsicum annuum HOM05D004131 ORTHO05D004778 1.8e-17 94.0 115 50.4
Haze_11173 Corylus avellana HOM05D004131 ORTHO05D004778 3.1e-17 93.2 115 47.8
Haze_11178 Corylus avellana HOM05D004131 ORTHO05D004778 3.1e-17 93.2 115 47.8
Duzib212G0438 Durio zibethinus HOM05D004131 ORTHO05D004778 3.1e-17 93.2 148 43.2
GSVIVG01038193001 Vitis vinifera HOM05D004131 ORTHO05D004778 3.1e-17 93.2 150 42.0
CDE08G0022 Ceratophyllum demersum HOM05D004131 ORTHO05D004778 4.0e-17 92.8 256 39.8
COL.COLO4_04655 Corchorus olitorius HOM05D004131 ORTHO05D004778 5.3e-17 92.4 153 41.8
Lalb_Chr05g0218801 Lupinus albus HOM05D004131 ORTHO05D004778 5.3e-17 92.4 160 40.6
AUR62023766 Chenopodium quinoa HOM05D004131 ORTHO05D004778 6.9e-17 92.0 252 43.3
Nitab4.5_0000064g0030 Nicotiana tabacum HOM05D004131 ORTHO05D004778 6.9e-17 92.0 115 49.6
Nitab4.5_0005089g0010 Nicotiana tabacum HOM05D004131 ORTHO05D004778 6.9e-17 92.0 115 49.6
Aa31LG10G14050 Aethionema arabicum HOM05D004131 ORTHO05D004778 9.0e-17 91.7 115 48.7
CiPaw.01G198800 Carya illinoinensis HOM05D004131 ORTHO05D004778 9.0e-17 91.7 115 49.6
Sc13g0007290 Simmondsia chinensis HOM05D004131 ORTHO05D004778 9.0e-17 91.7 115 48.7
Sopen12g009750 Solanum pennellii HOM05D004131 ORTHO05D004778 9.0e-17 91.7 147 42.9
CiPaw.02G123300 Carya illinoinensis HOM05D004131 ORTHO05D004778 1.2e-16 91.3 115 47.8
Dinv18309 Davidia involucrata HOM05D004131 ORTHO05D004778 1.2e-16 91.3 115 48.7
QL10p058548 Quercus lobata HOM05D004131 ORTHO05D004778 1.2e-16 91.3 99 53.5
QL10p059325 Quercus lobata HOM05D004131 ORTHO05D004778 1.2e-16 91.3 99 53.5
RcHm_v2.0_Chr2g0084981 Rosa chinensis HOM05D004131 ORTHO05D004778 1.2e-16 91.3 115 48.7
Ca_18622_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.5e-16 90.9 150 42.0
Ca_18628_v3 Cicer arietinum L. HOM05D004131 ORTHO05D004778 1.5e-16 90.9 150 42.0
Thhalv10006256m.g Eutrema salsugineum HOM05D004131 ORTHO05D004778 1.5e-16 90.9 115 48.7
Peaxi162Scf00483g00111 Petunia axillaris HOM05D004131 ORTHO05D004778 1.5e-16 90.9 115 49.6
Sp5g03340 Schrenkiella parvula HOM05D004131 ORTHO05D004778 1.5e-16 90.9 252 45.6
Ah.13g073340 Amaranthus hybridus HOM05D004131 ORTHO05D004778 2.0e-16 90.5 153 39.2
FvH4_1g00470 Fragaria vesca HOM05D004131 ORTHO05D004778 2.0e-16 90.5 115 48.7
FAN23G0024 Fragaria x ananassa HOM05D004131 ORTHO05D004778 2.0e-16 90.5 115 48.7
FAN26G1335 Fragaria x ananassa HOM05D004131 ORTHO05D004778 2.0e-16 90.5 115 48.7
Lj4g0014155 Lotus japonicus HOM05D004131 ORTHO05D004778 2.0e-16 90.5 151 39.7
ATR0743G176 Amborella trichopoda HOM05D004131 ORTHO05D004778 2.6e-16 90.1 154 40.3
AT3G59800 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 2.6e-16 90.1 254 46.1
CANSAT56G2001 Cannabis sativa HOM05D004131 ORTHO05D004778 2.6e-16 90.1 115 47.8
THA.LOC104802336 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.6e-16 90.1 115 47.8
Cfa021469 Carpinus fangiana HOM05D004131 ORTHO05D004778 3.4e-16 89.7 115 47.8
BraA04t15927Z Brassica rapa HOM05D004131 ORTHO05D004778 4.5e-16 89.4 252 42.1
CSS0004184 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 4.5e-16 89.4 252 46.4
MD15G1147200 Malus domestica HOM05D004131 ORTHO05D004778 4.5e-16 89.4 115 47.8
Medtr4g087630 Medicago truncatula HOM05D004131 ORTHO05D004778 4.5e-16 89.4 150 41.3
Phvul.003G059400 Phaseolus vulgaris HOM05D004131 ORTHO05D004778 4.5e-16 89.4 115 47.0
Psat7g119160 Pisum sativum HOM05D004131 ORTHO05D004778 4.5e-16 89.4 150 41.3
PGSC0003DMG400005367 Solanum tuberosum HOM05D004131 ORTHO05D004778 4.5e-16 89.4 115 47.8
TPR.G23549 Trifolium pratense HOM05D004131 ORTHO05D004778 4.5e-16 89.4 150 41.3
Aqoxy2G04165 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 5.8e-16 89.0 150 40.0
FAN28G1052 Fragaria x ananassa HOM05D004131 ORTHO05D004778 5.8e-16 89.0 115 47.8
Glyma.07G206100 Glycine max HOM05D004131 ORTHO05D004778 5.8e-16 89.0 150 41.3
Sp4g25870 Schrenkiella parvula HOM05D004131 ORTHO05D004778 5.8e-16 89.0 252 46.4
AL5G41850 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 7.6e-16 88.6 143 39.9
CSS0028329 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 7.6e-16 88.6 252 44.8
A04p02020 Brassica napus HOM05D004131 ORTHO05D004778 9.9e-16 88.2 148 39.9
CARHR138980 Cardamine hirsuta HOM05D004131 ORTHO05D004778 9.9e-16 88.2 252 44.8
TAR362G1052 Trochodendron aralioides HOM05D004131 ORTHO05D004778 9.9e-16 88.2 115 47.0
Cc03_g14990 Coffea canephora HOM05D004131 ORTHO05D004778 1.3e-15 87.8 148 41.9
ECA233G3286 Erigeron canadensis HOM05D004131 ORTHO05D004778 1.3e-15 87.8 115 47.0
Hund12374 Selenicereus undatus HOM05D004131 ORTHO05D004778 1.3e-15 87.8 115 47.0
EL10Ac3g06119 Beta vulgaris HOM05D004131 ORTHO05D004778 1.7e-15 87.4 160 37.5
BcaC02g10087 Brassica carinata HOM05D004131 ORTHO05D004778 1.7e-15 87.4 148 39.9
Lju470A13T20 Lonicera japonica HOM05D004131 ORTHO05D004778 1.7e-15 87.4 192 37.5
Actinidia28972 Actinidia chinensis HOM05D004131 ORTHO05D004778 2.2e-15 87.0 115 47.8
arahy.Tifrunner.gnm1.ann1.GY80IK Arachis hypogaea HOM05D004131 ORTHO05D004778 2.2e-15 87.0 99 50.5
C04p32910 Brassica napus HOM05D004131 ORTHO05D004778 2.2e-15 87.0 148 39.9
Lalb_Chr16g0384341 Lupinus albus HOM05D004131 ORTHO05D004778 2.2e-15 87.0 150 41.3
Glyma.02G138900 Glycine max HOM05D004131 ORTHO05D004778 2.9e-15 86.7 115 46.1
HanXRQChr02g0059071 Helianthus annuus HOM05D004131 ORTHO05D004778 2.9e-15 86.7 115 46.1
THA.LOC104805841 Tarenaya hassleriana HOM05D004131 ORTHO05D004778 2.9e-15 86.7 115 47.0
MD02G1003900 Malus domestica HOM05D004131 ORTHO05D004778 3.8e-15 86.3 115 47.0
BolC4t24854H Brassica oleracea HOM05D004131 ORTHO05D004778 4.9e-15 85.9 115 46.1
Carub.0004s2633 Capsella rubella HOM05D004131 ORTHO05D004778 4.9e-15 85.9 115 45.2
MELO3C022231.2 Cucumis melo HOM05D004131 ORTHO05D004778 6.4e-15 85.5 177 36.7
AUR62002422 Chenopodium quinoa HOM05D004131 ORTHO05D004778 8.4e-15 85.1 151 38.4
Eucgr.G01598 Eucalyptus grandis HOM05D004131 ORTHO05D004778 1.4e-14 84.3 115 46.1
Eucgr.L00027 Eucalyptus grandis HOM05D004131 ORTHO05D004778 1.4e-14 84.3 115 46.1
CsaV3_5G040580 Cucumis sativus L. HOM05D004131 ORTHO05D004778 1.9e-14 84.0 256 43.4
PSO017G4173 Papaver somniferum HOM05D004131 ORTHO05D004778 1.9e-14 84.0 116 47.4
PSO675G2278 Papaver somniferum HOM05D004131 ORTHO05D004778 1.9e-14 84.0 149 41.6
BcaB02g08209 Brassica carinata HOM05D004131 ORTHO05D004778 2.4e-14 83.6 115 44.3
Lj6C265T11 Lonicera japonica HOM05D004131 ORTHO05D004778 4.2e-14 82.8 153 35.3
HPP92_023727 Vanilla planifolia HOM05D004131 ORTHO05D004778 4.2e-14 82.8 153 39.9
BcaB02g08900 Brassica carinata HOM05D004131 ORTHO05D004778 5.4e-14 82.4 117 45.3
BcaC02g12362 Brassica carinata HOM05D004131 ORTHO05D004778 5.4e-14 82.4 117 45.3
A05p04000 Brassica napus HOM05D004131 ORTHO05D004778 5.4e-14 82.4 117 45.3
C04p04750 Brassica napus HOM05D004131 ORTHO05D004778 5.4e-14 82.4 117 45.3
BraA05t19388Z Brassica rapa HOM05D004131 ORTHO05D004778 5.4e-14 82.4 117 45.3
CSS0000211 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 5.4e-14 82.4 115 44.3
CSS0046112 Camellia sinensis var. sinensis HOM05D004131 ORTHO05D004778 5.4e-14 82.4 115 44.3
BolC4t22105H Brassica oleracea HOM05D004131 ORTHO05D004778 1.2e-13 81.3 159 38.4
Actinidia11437 Actinidia chinensis HOM05D004131 ORTHO05D004778 1.6e-13 80.9 105 48.6
BraA09t40640Z Brassica rapa HOM05D004131 ORTHO05D004778 3.5e-13 79.7 115 43.5
vmacro15701 Vaccinium macrocarpon HOM05D004131 ORTHO05D004778 6.0e-13 79.0 99 50.5
Zm00001eb425720 Zea mays HOM05D004131 ORTHO05D004778 1.0e-12 78.2 118 44.9
Rhsim02G0086100 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.3e-12 77.8 99 49.5
RhsimUnG0015600 Rhododendron simsii HOM05D004131 ORTHO05D004778 1.3e-12 77.8 99 49.5
Ah.07g202990 Amaranthus hybridus HOM05D004131 ORTHO05D004778 6.7e-12 75.5 144 36.8
Aqoxy604s001 Aquilegia oxysepala HOM05D004131 ORTHO05D004778 1.9e-11 73.9 149 36.2
AagrBONN_evm.TU.Sc2ySwM_344.2765 Anthoceros agrestis HOM05D004131 ORTHO05D004778 2.5e-11 73.6 155 35.5
Mapoly0055s0100 Marchantia polymorpha HOM05D004131 ORTHO05D004778 2.5e-11 73.6 110 44.5
Pp3c3_18840 Physcomitrium patens HOM05D004131 ORTHO05D004778 9.6e-11 71.6 101 46.5
CARHR170140 Cardamine hirsuta HOM05D004131 ORTHO05D004778 9.0e-09 65.1 180 50.6
SMO364G0381 Selaginella moellendorffii HOM05D004131 ORTHO05D004778 9.0e-09 65.1 99 41.4
Lju470A13G17 Lonicera japonica HOM05D004131 ORTHO05D004778 3.4e-08 63.2 43 67.4
Sed0002263 Sechium edule HOM05D004131 ORTHO05D004778 7.6e-08 62.0 183 47.0
VMungo0251G3663 Vigna mungo HOM05D004131 ORTHO05D004778 7.6e-08 62.0 43 65.1
AL4G42670 Arabidopsis lyrata HOM05D004131 ORTHO05D004778 4.9e-07 59.3 82 40.2
PGR042G3815 Punica granatum HOM05D004131 ORTHO05D004778 3.2e-06 56.6 77 44.2
AT2G43795 Arabidopsis thaliana HOM05D004131 ORTHO05D004778 4.2e-06 56.2 82 40.2
Cpa.g.c34531 Carica papaya HOM05D004131 ORTHO05D004778 4.2e-06 56.2 29 93.1
Sed0017538 Sechium edule HOM05D004131 ORTHO05D004778 5.5e-06 55.8 31 77.4


User provided reference genes

Program Settings