Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 3.5e-61 238.0 116 100.0
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 1.3e-26 123.2 170 45.3
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 1.1e-25 120.2 170 44.1
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 5.3e-25 117.9 135 51.1
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 7.0e-25 117.5 152 49.3
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 1.2e-24 116.7 170 44.1
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 4.5e-24 114.8 170 40.6
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.9e-22 109.4 170 41.8
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 3.2e-22 108.6 170 41.2
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 5.5e-22 107.8 84 59.5
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 5.5e-22 107.8 170 41.2
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 7.2e-22 107.5 84 63.1
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 9.4e-22 107.1 170 40.6
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 9.4e-22 107.1 170 40.6
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 4.7e-21 104.8 170 40.0
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 4.7e-21 104.8 170 40.0
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 4.7e-21 104.8 170 40.0
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 1.0e-20 103.6 170 39.4
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 1.0e-20 103.6 170 39.4
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 1.8e-20 102.8 170 39.4
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 2.3e-20 102.4 170 39.4
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 4.0e-20 101.7 171 38.6
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 8.8e-20 100.5 161 38.5
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 1.2e-19 100.1 170 40.0
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.2e-19 100.1 170 38.2
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 1.2e-19 100.1 170 38.8
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.6e-19 99.0 170 38.2
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 3.4e-19 98.6 170 38.2
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 4.4e-19 98.2 170 38.2
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 4.4e-19 98.2 162 39.5
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.7e-18 96.3 170 37.1
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 1.7e-18 96.3 162 39.5
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 1.7e-18 96.3 170 37.6
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 1.7e-18 96.3 162 38.9
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 1.7e-18 96.3 162 38.3
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 2.2e-18 95.9 143 42.7
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 2.8e-18 95.5 170 37.6
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 3.7e-18 95.1 167 37.1
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 1.4e-17 93.2 170 37.6
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.8e-17 92.8 169 36.7
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 2.4e-17 92.4 170 37.1
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 2.4e-17 92.4 170 36.5
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 2.4e-17 92.4 162 38.3
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 2.4e-17 92.4 162 37.0
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 1.2e-16 90.1 121 47.1
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 2.7e-16 89.0 162 37.7
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 3.5e-16 88.6 163 38.0
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 4.5e-16 88.2 162 37.0
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 5.9e-16 87.8 163 37.4
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 5.9e-16 87.8 163 36.8
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 7.7e-16 87.4 153 37.3
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 1.3e-15 86.7 163 35.6
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 1.7e-15 86.3 163 36.2
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 1.7e-15 86.3 163 36.2
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 1.7e-15 86.3 151 37.7
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 1.7e-15 86.3 163 37.4
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 2.2e-15 85.9 163 36.8
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 2.2e-15 85.9 164 35.4
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 2.9e-15 85.5 163 35.6
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 2.9e-15 85.5 101 41.6
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 2.9e-15 85.5 163 35.6
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 2.9e-15 85.5 101 41.6
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 5.0e-15 84.7 163 35.6
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 5.0e-15 84.7 163 35.6
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 6.5e-15 84.3 163 35.0
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 8.5e-15 84.0 60 65.0
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 1.1e-14 83.6 170 35.9
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.1e-14 83.6 162 33.3
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 1.5e-14 83.2 161 33.5
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 1.5e-14 83.2 163 35.0
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 1.9e-14 82.8 151 38.4
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 1.9e-14 82.8 151 39.1
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 2.5e-14 82.4 60 61.7
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 3.2e-14 82.0 162 32.7
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 3.2e-14 82.0 163 35.6
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 4.2e-14 81.6 186 32.8
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 7.2e-14 80.9 170 33.5
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 1.2e-13 80.1 163 35.0
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.2e-13 80.1 163 35.0
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.2e-13 80.1 162 34.0
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.6e-13 79.7 162 30.9
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 2.7e-13 79.0 162 32.1
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 2.7e-13 79.0 162 32.1
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 2.7e-13 79.0 164 30.5
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 2.7e-13 79.0 51 70.6
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 3.6e-13 78.6 53 62.3
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 6.1e-13 77.8 163 33.7
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 6.1e-13 77.8 59 66.1
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 8.0e-13 77.4 162 31.5
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 8.0e-13 77.4 162 31.5
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 8.0e-13 77.4 153 35.3
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 8.0e-13 77.4 154 34.4
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 1.0e-12 77.0 163 33.7
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 1.0e-12 77.0 162 30.9
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 1.0e-12 77.0 162 30.9
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 1.0e-12 77.0 162 30.9
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 1.4e-12 76.6 162 32.1
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 4.0e-12 75.1 162 30.9
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 4.0e-12 75.1 162 33.3
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.0e-12 75.1 162 30.2
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 5.2e-12 74.7 156 32.1
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 6.8e-12 74.3 163 32.5
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 6.8e-12 74.3 151 34.4
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 8.8e-12 73.9 162 30.2
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 8.8e-12 73.9 151 34.4
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 1.2e-11 73.6 163 32.5
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 1.5e-11 73.2 162 30.2
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 3.4e-11 72.0 172 31.4
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 2.8e-10 68.9 163 29.4
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.8e-10 68.2 57 57.9
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.1e-09 67.0 41 70.7
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 1.1e-09 67.0 41 73.2
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 1.8e-09 66.2 124 35.5
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 1.8e-09 66.2 124 35.5
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 2.4e-09 65.9 151 32.5
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.4e-09 65.9 57 54.4
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 4.1e-09 65.1 162 28.4
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 4.1e-09 65.1 173 30.1
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 5.4e-09 64.7 196 29.1
FAN23G1236 Fragaria x ananassa HOM05D004249 ORTHO05D005015 7.0e-09 64.3 47 61.7
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 9.1e-09 63.9 163 31.9
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 9.1e-09 63.9 151 31.8
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 9.1e-09 63.9 151 31.8
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 9.1e-09 63.9 151 32.5
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 9.1e-09 63.9 151 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 1.2e-08 63.5 164 31.1
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 2.0e-08 62.8 160 31.2
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 4.5e-08 61.6 124 33.9
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 4.5e-08 61.6 52 48.1
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 7.7e-08 60.8 135 31.9
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.7e-07 59.7 151 31.1
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 2.3e-07 59.3 164 30.5
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 6.6e-07 57.8 114 32.5
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 8.6e-07 57.4 47 57.4
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 8.6e-07 57.4 47 57.4
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 8.6e-07 57.4 47 57.4
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 1.1e-06 57.0 47 57.4
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 1.1e-06 57.0 47 57.4
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 1.5e-06 56.6 163 28.8
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 4.2e-06 55.1 52 46.2
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 7.2e-06 54.3 146 27.4


User provided reference genes

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