Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14844 Striga asiatica HOM05D020753 ORTHO05D403803 1.3e-67 259.6 131 100.0
SGA_v2.0_scaffold54G19693 Striga asiatica HOM05D020753 ORTHO05D404249 7.8e-57 223.8 125 90.4
SGA_v2.0_scaffold12G06195 Striga asiatica HOM05D020753 ORTHO05D401615 1.5e-36 156.4 112 79.5
SGA_v2.0_scaffold61G21162 Striga asiatica HOM05D020753 ORTHO05D404919 2.8e-30 135.6 105 70.5
SGA_v2.0_scaffold42G16075 Striga asiatica HOM05D020753 ORTHO05D405316 6.9e-21 104.4 70 82.9
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 4.2e-18 95.1 89 56.2
Migut.H02415 Erythranthe guttata HOM05D000033 ORTHO05D001614 9.3e-18 94.0 89 55.1
SGA_v2.0_scaffold7G03789 Striga asiatica HOM05D024773 ORTHO05D405707 1.8e-16 89.7 99 52.5
SalBow6G1912 Salvia bowleyana HOM05D000033 ORTHO05D001614 3.0e-16 89.0 84 53.6
SalBow6G6313 Salvia bowleyana HOM05D000033 ORTHO05D001614 3.0e-16 89.0 84 53.6
SGA_v2.0_scaffold47G17724 Striga asiatica HOM05D000033 ORTHO05D001614 9.6e-15 84.0 95 50.5
SGA_v2.0_scaffold102G29902 Striga asiatica HOM05D024773 ORTHO05D404664 9.0e-13 77.4 71 63.4
SGA_v2.0_scaffold104G30189 Striga asiatica HOM05D024773 ORTHO05D402345 2.9e-11 72.4 57 70.2
CAN.G267.8 Capsicum annuum HOM05D000033 ORTHO05D001614 2.5e-10 69.3 82 47.6
Oeu002110.2 Olea europaea HOM05D000033 ORTHO05D001614 2.5e-10 69.3 90 44.4
Solyc04g054200.3 Solanum lycopersicum HOM05D000033 ORTHO05D001614 7.2e-10 67.8 94 42.6
Sopen04g023670 Solanum pennellii HOM05D000033 ORTHO05D001614 2.1e-09 66.2 94 41.5
Nitab4.5_0000689g0010 Nicotiana tabacum HOM05D000033 ORTHO05D001614 4.6e-09 65.1 87 43.7
Lj2A560T65 Lonicera japonica HOM05D000033 ORTHO05D001614 6.1e-09 64.7 105 41.0
PGSC0003DMG400012955 Solanum tuberosum HOM05D000033 ORTHO05D001614 1.3e-08 63.5 94 40.4
SGA_v2.0_scaffold51G18735 Striga asiatica HOM05D000033 ORTHO05D001614 1.8e-08 63.2 47 70.2
Cc07_g16010 Coffea canephora HOM05D000033 ORTHO05D001614 2.3e-08 62.8 108 38.9
Nitab4.5_0000156g0130 Nicotiana tabacum HOM05D000033 ORTHO05D001614 5.1e-08 61.6 82 42.7
EL10Ac6g14731 Beta vulgaris HOM05D000033 ORTHO05D001614 2.5e-07 59.3 84 38.1
AUR62003320 Chenopodium quinoa HOM05D000033 ORTHO05D001614 3.3e-07 58.9 97 36.1
SHI11673 Sapria himalayana HOM05D000033 ORTHO05D001614 7.4e-07 57.8 83 42.2
Lj1g0003526 Lotus japonicus HOM05D000033 ORTHO05D001614 2.2e-06 56.2 82 45.1
Actinidia33366 Actinidia chinensis HOM05D000033 ORTHO05D001614 2.8e-06 55.8 82 45.1
Peaxi162Scf01006g00001 Petunia axillaris HOM05D000033 ORTHO05D001614 2.8e-06 55.8 93 38.7
Psat5g066800 Pisum sativum HOM05D000033 ORTHO05D001614 2.8e-06 55.8 89 38.2
AUR62016262 Chenopodium quinoa HOM05D000033 ORTHO05D001614 3.7e-06 55.5 97 34.0
Actinidia08333 Actinidia chinensis HOM05D000033 ORTHO05D013645 8.2e-06 54.3 82 45.1


User provided reference genes

Program Settings