Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14831 Striga asiatica HOM05D004946 ORTHO05D006101 2.8e-206 721.8 397 100.0
SGA_v2.0_scaffold5G02571 Striga asiatica HOM05D004946 ORTHO05D006101 4.3e-74 282.7 359 53.8
MSTRG.11071 Avicennia marina HOM05D004946 ORTHO05D006101 3.0e-67 260.0 361 51.0
Migut.I00881 Erythranthe guttata HOM05D004946 ORTHO05D006101 3.0e-51 206.8 377 43.2
Oeu064714.1 Olea europaea HOM05D004946 ORTHO05D006101 4.3e-50 203.0 359 43.7
Oeu056801.1 Olea europaea HOM05D004946 ORTHO05D006101 4.0e-48 196.4 359 44.0
Dinv28107 Davidia involucrata HOM05D004946 ORTHO05D006101 2.5e-45 187.2 365 41.1
Dinv15680 Davidia involucrata HOM05D004946 ORTHO05D006101 2.7e-44 183.7 371 41.5
Hma1.2p1_2409F.1_g321510 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 1.3e-43 181.4 371 43.1
Atru.chr9.855 Acer truncatum HOM05D004946 ORTHO05D006101 3.4e-39 166.8 360 40.0
Cc04_g07080 Coffea canephora HOM05D004946 ORTHO05D006101 5.0e-38 162.9 366 39.3
Actinidia18931 Actinidia chinensis HOM05D004946 ORTHO05D006101 6.1e-36 156.0 377 40.1
Thecc.03G035700 Theobroma cacao HOM05D004946 ORTHO05D006101 6.1e-36 156.0 363 36.9
FvH4_5g12080 Fragaria vesca HOM05D004946 ORTHO05D006101 1.8e-35 154.5 359 38.2
Haze_18683 Corylus avellana HOM05D004946 ORTHO05D006101 2.3e-35 154.1 359 38.7
MD14G1227000 Malus domestica HOM05D004946 ORTHO05D006101 5.1e-35 152.9 375 38.9
FAN18G3139 Fragaria x ananassa HOM05D004946 ORTHO05D006101 6.7e-35 152.5 359 37.9
Potri.012G056200 Populus trichocarpa HOM05D004946 ORTHO05D006101 5.7e-34 149.4 371 38.3
FAN08G1246 Fragaria x ananassa HOM05D004946 ORTHO05D006101 7.4e-34 149.1 359 37.6
unitig_8.g3895 Utricularia gibba HOM05D004946 ORTHO05D006101 7.4e-34 149.1 360 36.9
FAN18G2620 Fragaria x ananassa HOM05D004946 ORTHO05D006101 1.3e-33 148.3 359 37.6
PGR044G1576 Punica granatum HOM05D004946 ORTHO05D006101 3.7e-33 146.7 375 39.2
Actinidia35090 Actinidia chinensis HOM05D004946 ORTHO05D006101 1.1e-32 145.2 361 37.7
FAN04G0770 Fragaria x ananassa HOM05D004946 ORTHO05D006101 2.4e-32 144.1 359 37.6
CSS0004173 Camellia sinensis var. sinensis HOM05D004946 ORTHO05D006101 2.6e-31 140.6 372 39.2
ECA238G2506 Erigeron canadensis HOM05D004946 ORTHO05D006101 3.4e-31 140.2 357 37.5
FAN13G1851 Fragaria x ananassa HOM05D004946 ORTHO05D006101 3.4e-31 140.2 365 39.5
Duzib084G0074 Durio zibethinus HOM05D004946 ORTHO05D006101 4.5e-31 139.8 363 36.9
Prupe.5G221700 Prunus persica HOM05D004946 ORTHO05D006101 1.3e-30 138.3 374 37.2
QL10p025417 Quercus lobata HOM05D004946 ORTHO05D006101 1.7e-30 137.9 364 36.3
RcHm_v2.0_Chr7g0185491 Rosa chinensis HOM05D004946 ORTHO05D006101 5.0e-30 136.3 359 35.7
Nitab4.5_0000974g0090 Nicotiana tabacum HOM05D004946 ORTHO05D006101 6.5e-30 136.0 355 39.4
Sc12g0007670 Simmondsia chinensis HOM05D004946 ORTHO05D006101 1.4e-29 134.8 375 33.3
Sp5g29040 Schrenkiella parvula HOM05D004946 ORTHO05D006101 9.4e-29 132.1 354 35.0
Cfa019764 Carpinus fangiana HOM05D004946 ORTHO05D006101 3.6e-28 130.2 343 37.6
Sed0008793 Sechium edule HOM05D004946 ORTHO05D006101 4.6e-28 129.8 378 34.9
PGSC0003DMG401005635 Solanum tuberosum HOM05D004946 ORTHO05D006101 1.8e-27 127.9 356 34.8
Nitab4.5_0000208g0330 Nicotiana tabacum HOM05D004946 ORTHO05D006101 2.3e-27 127.5 367 38.4
VMungo0720G2584 Vigna mungo HOM05D004946 ORTHO05D006101 1.1e-26 125.2 364 35.7
Gorai.006G060600 Gossypium raimondii HOM05D004946 ORTHO05D006101 4.3e-26 123.2 369 34.7
vmacro16446 Vaccinium macrocarpon HOM05D004946 ORTHO05D006101 4.3e-26 123.2 376 37.5
Gohir.D09G049200 Gossypium hirsutum HOM05D004946 ORTHO05D006101 5.7e-26 122.9 369 34.7
Aa31LG4G4160 Aethionema arabicum HOM05D004946 ORTHO05D006101 9.7e-26 122.1 367 33.2
Sopen03g038310 Solanum pennellii HOM05D004946 ORTHO05D006101 9.7e-26 122.1 356 33.4
Ca_25456_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 1.3e-25 121.7 364 38.2
Gohir.D08G105600 Gossypium hirsutum HOM05D004946 ORTHO05D006101 1.3e-25 121.7 355 35.2
Eucgr.K02226 Eucalyptus grandis HOM05D004946 ORTHO05D006101 2.2e-25 120.9 370 36.2
CARHR066930 Cardamine hirsuta HOM05D004946 ORTHO05D006101 3.7e-25 120.2 368 34.0
Peaxi162Scf00015g01034 Petunia axillaris HOM05D004946 ORTHO05D006101 4.8e-25 119.8 356 36.0
Gorai.004G113500 Gossypium raimondii HOM05D004946 ORTHO05D006101 6.3e-25 119.4 327 35.5
Lalb_Chr09g0331081 Lupinus albus HOM05D004946 ORTHO05D006101 6.3e-25 119.4 359 34.0
Glyma.10G040800 Glycine max HOM05D004946 ORTHO05D006101 1.1e-24 118.6 361 35.2
CiPaw.16G086800 Carya illinoinensis HOM05D004946 ORTHO05D006101 1.4e-24 118.2 359 38.2
COL.COLO4_11303 Corchorus olitorius HOM05D004946 ORTHO05D006101 2.4e-24 117.5 339 36.6
CsaV3_1G006630 Cucumis sativus L. HOM05D004946 ORTHO05D006101 9.1e-24 115.5 363 33.6
Medtr8g104260 Medicago truncatula HOM05D004946 ORTHO05D006101 9.1e-24 115.5 384 35.4
Nitab4.5_0012710g0020 Nicotiana tabacum HOM05D004946 ORTHO05D006101 9.1e-24 115.5 367 36.8
MELO3C002087.2 Cucumis melo HOM05D004946 ORTHO05D006101 2.6e-23 114.0 363 34.7
Manes.01G011100 Manihot esculenta HOM05D004946 ORTHO05D006101 4.5e-23 113.2 322 37.6
TWI15G0834 Tripterygium wilfordii HOM05D004946 ORTHO05D006101 4.5e-23 113.2 378 35.7
A07p29630 Brassica napus HOM05D004946 ORTHO05D006101 7.7e-23 112.5 358 34.6
Lj4g0022250 Lotus japonicus HOM05D004946 ORTHO05D006101 7.7e-23 112.5 374 32.6
AT1G73840 Arabidopsis thaliana HOM05D004946 ORTHO05D006101 1.0e-22 112.1 362 36.5
TAR629G2125 Trochodendron aralioides HOM05D004946 ORTHO05D006101 1.7e-22 111.3 361 34.9
CANSAT80G1182 Cannabis sativa HOM05D004946 ORTHO05D006101 2.2e-22 110.9 368 33.2
CAN.G1889.4 Capsicum annuum HOM05D004946 ORTHO05D006101 8.5e-22 109.0 367 32.7
Hma1.2p1_0701F.1_g205890 Hydrangea macrophylla HOM05D004946 ORTHO05D006101 4.2e-21 106.7 253 40.7
Ciclev10020493m.g Citrus clementina HOM05D004946 ORTHO05D006101 5.5e-21 106.3 367 32.2
BcaB03g15098 Brassica carinata HOM05D004946 ORTHO05D006101 2.1e-20 104.4 365 32.6
HPP92_004811 Vanilla planifolia HOM05D004946 ORTHO05D006101 4.7e-20 103.2 361 31.6
BcaB03g15093 Brassica carinata HOM05D004946 ORTHO05D006101 1.4e-19 101.7 354 31.9
BcaB03g15096 Brassica carinata HOM05D004946 ORTHO05D006101 1.4e-19 101.7 354 31.9
C06p47990 Brassica napus HOM05D004946 ORTHO05D006101 1.4e-19 101.7 354 31.9
Aqoxy3G00287 Aquilegia oxysepala HOM05D004946 ORTHO05D006101 1.8e-19 101.3 364 34.6
Psat7g010600 Pisum sativum HOM05D004946 ORTHO05D006101 2.3e-19 100.9 369 33.3
BcaB03g15731 Brassica carinata HOM05D004946 ORTHO05D006101 3.9e-19 100.1 367 34.9
Nn4g23854 Nelumbo nucifera HOM05D004946 ORTHO05D006101 3.9e-19 100.1 363 35.0
Phvul.007G154000 Phaseolus vulgaris HOM05D004946 ORTHO05D006101 5.1e-19 99.8 362 31.5
Nitab4.5_0009306g0010 Nicotiana tabacum HOM05D004946 ORTHO05D006101 1.5e-18 98.2 330 32.4
AL2G33660 Arabidopsis lyrata HOM05D004946 ORTHO05D006101 5.7e-18 96.3 356 33.4
Carub.0002s2060 Capsella rubella HOM05D004946 ORTHO05D006101 9.7e-18 95.5 355 33.2
CANSAT80G2575 Cannabis sativa HOM05D004946 ORTHO05D006101 1.3e-17 95.1 57 80.7
ClCG04G011130 Citrullus lanatus HOM05D004946 ORTHO05D006101 4.8e-17 93.2 367 33.0
Gohir.A08G094762 Gossypium hirsutum HOM05D004946 ORTHO05D006101 4.8e-17 93.2 57 78.9
Lsat_1_v5_gn_2_12261 Lactuca sativa HOM05D004946 ORTHO05D006101 4.8e-17 93.2 366 33.9
Rhsim12G0143100 Rhododendron simsii HOM05D004946 ORTHO05D006101 4.8e-17 93.2 365 32.1
Lalb_Chr05g0222491 Lupinus albus HOM05D004946 ORTHO05D006101 6.3e-17 92.8 318 31.4
arahy.Tifrunner.gnm1.ann1.N3S6I2 Arachis hypogaea HOM05D004946 ORTHO05D006101 1.4e-16 91.7 284 35.9
Sabra12G0039900 Salix brachista HOM05D004946 ORTHO05D006101 2.4e-16 90.9 361 33.0
Ah.11g048200 Amaranthus hybridus HOM05D004946 ORTHO05D006101 5.3e-16 89.7 361 33.2
HPP92_004808 Vanilla planifolia HOM05D004946 ORTHO05D006101 5.3e-16 89.7 347 31.1
arahy.Tifrunner.gnm1.ann1.G56NCJ Arachis hypogaea HOM05D004946 ORTHO05D006101 2.0e-15 87.8 285 34.7
EL10Ac5g11063 Beta vulgaris HOM05D004946 ORTHO05D006101 2.6e-15 87.4 190 36.3
Nn3g17855 Nelumbo nucifera HOM05D004946 ORTHO05D006101 2.6e-15 87.4 369 31.4
MBI02_g11379_MAGBIO Magnolia biondii HOM05D004946 ORTHO05D006101 1.7e-14 84.7 175 38.9
THA.LOC104812144 Tarenaya hassleriana HOM05D004946 ORTHO05D006101 2.9e-14 84.0 394 29.7
FvH4_3g36821 Fragaria vesca HOM05D004946 ORTHO05D006101 5.0e-14 83.2 54 74.1
Gohir.A08G095000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 6.5e-14 82.8 228 36.4
CDE02G4219 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 8.5e-14 82.4 363 29.2
TPR.G32702 Trifolium pratense HOM05D004946 ORTHO05D006101 8.5e-14 82.4 313 31.0
BcaB03g15090 Brassica carinata HOM05D004946 ORTHO05D006101 1.1e-13 82.0 363 31.4
HanXRQChr06g0184711 Helianthus annuus HOM05D004946 ORTHO05D006101 1.5e-13 81.6 57 77.2
BolC6t39834H Brassica oleracea HOM05D004946 ORTHO05D006101 3.2e-13 80.5 165 37.6
arahy.Tifrunner.gnm1.ann1.X2WJJP Arachis hypogaea HOM05D004946 ORTHO05D006101 4.7e-12 76.6 385 29.6
arahy.Tifrunner.gnm1.ann1.94ZJ0E Arachis hypogaea HOM05D004946 ORTHO05D006101 8.0e-12 75.9 385 29.6
A07p39700 Brassica napus HOM05D004946 ORTHO05D006101 1.8e-11 74.7 368 29.9
SEGI_28516 Sequoiadendron giganteum HOM05D004946 ORTHO05D006101 4.0e-11 73.6 75 53.3
Ca_25442_v3 Cicer arietinum L. HOM05D004946 ORTHO05D006101 6.7e-11 72.8 381 32.8
PSO478G0599 Papaver somniferum HOM05D004946 ORTHO05D006101 8.8e-11 72.4 366 29.2
Thhalv10018702m.g Eutrema salsugineum HOM05D004946 ORTHO05D006101 1.5e-10 71.6 155 36.8
BraA07t30604Z Brassica rapa HOM05D004946 ORTHO05D006101 2.6e-10 70.9 387 29.2
BraA07t31519Z Brassica rapa HOM05D004946 ORTHO05D006101 3.3e-10 70.5 370 29.7
Solyc03g119460.4 Solanum lycopersicum HOM05D004946 ORTHO05D006101 4.4e-10 70.1 357 26.3
PSO017G0469 Papaver somniferum HOM05D004946 ORTHO05D006101 7.5e-10 69.3 371 29.1
Mapoly0070s0034 Marchantia polymorpha HOM05D004266 ORTHO05D005151 9.7e-10 68.9 56 64.3
CDE06G1062 Ceratophyllum demersum HOM05D004946 ORTHO05D006101 1.3e-09 68.6 340 28.5
BcaC08g45619 Brassica carinata HOM05D004946 ORTHO05D006101 2.2e-09 67.8 378 30.7
Pp3c14_13370 Physcomitrium patens HOM05D004266 ORTHO05D005151 6.3e-09 66.2 52 59.6
C06p33810 Brassica napus HOM05D004946 ORTHO05D006101 1.1e-08 65.5 387 29.5
BolC6t38494H Brassica oleracea HOM05D004946 ORTHO05D006101 1.1e-08 65.5 387 29.5
Zm00001eb292700 Zea mays HOM05D004946 ORTHO05D006101 1.4e-08 65.1 361 27.7
AUR62038115 Chenopodium quinoa HOM05D004946 ORTHO05D006101 1.8e-08 64.7 255 33.7
Peaxi162Scf00634g00318 Petunia axillaris HOM05D004946 ORTHO05D006101 1.2e-07 62.0 161 37.9
CBR_g33965 Chara braunii HOM05D004266 ORTHO05D005151 1.6e-07 61.6 45 66.7
AagrBONN_evm.TU.Sc2ySwM_228.143 Anthoceros agrestis HOM05D004266 ORTHO05D005151 3.5e-07 60.5 43 69.8
AUR62008463 Chenopodium quinoa HOM05D004946 ORTHO05D006101 5.9e-07 59.7 245 31.4
Gohir.A09G048000 Gossypium hirsutum HOM05D004946 ORTHO05D006101 7.7e-07 59.3 238 34.0
ATR1125G052 Amborella trichopoda HOM05D004946 ORTHO05D006101 8.5e-06 55.8 261 32.2


User provided reference genes

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