Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 3.6e-132 474.9 245 100.0
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 3.6e-55 219.2 266 51.9
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 1.2e-45 187.6 265 46.8
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 5.6e-40 168.7 270 43.7
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 5.6e-40 168.7 308 42.2
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 4.4e-37 159.1 276 42.8
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 6.6e-33 145.2 268 41.4
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 4.9e-28 129.0 145 52.4
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 4.9e-28 129.0 146 49.3
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.1e-27 127.9 145 51.7
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.4e-27 126.7 145 51.0
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 3.5e-26 122.9 297 35.4
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.0e-25 121.3 148 50.0
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.0e-25 121.3 180 43.3
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.7e-25 120.6 141 50.4
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 6.6e-25 118.6 261 35.2
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.5e-24 116.7 262 36.6
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.7e-23 112.5 250 38.8
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 6.2e-23 112.1 193 42.0
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 4.0e-22 109.4 169 43.2
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 6.8e-22 108.6 261 33.7
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 1.5e-21 107.5 153 42.5
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.6e-21 106.7 258 33.7
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 3.4e-21 106.3 150 44.7
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 3.4e-21 106.3 153 45.8
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 4.4e-21 105.9 262 36.3
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 9.9e-21 104.8 144 45.8
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.7e-20 104.0 248 35.5
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 1.7e-20 104.0 145 47.6
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 2.2e-20 103.6 274 33.2
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 8.4e-20 101.7 142 45.8
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.1e-19 101.3 142 45.1
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.1e-19 101.3 284 32.7
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.9e-19 100.5 143 45.5
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 3.2e-19 99.8 259 32.4
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 4.1e-19 99.4 259 32.8
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.1e-19 98.6 143 45.5
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 7.1e-19 98.6 143 45.5
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 7.1e-19 98.6 140 45.7
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 7.1e-19 98.6 267 34.8
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 2.1e-18 97.1 259 32.8
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 2.7e-18 96.7 259 32.4
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 4.6e-18 95.9 141 46.1
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 4.6e-18 95.9 270 32.2
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 7.8e-18 95.1 284 33.5
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.7e-17 94.0 110 51.8
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.7e-17 94.0 110 51.8
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.7e-17 94.0 264 32.2
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 2.3e-17 93.6 247 34.8
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 3.9e-17 92.8 262 32.8
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 8.7e-17 91.7 251 33.9
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 1.1e-16 91.3 209 34.0
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 1.1e-16 91.3 240 35.0
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 1.5e-16 90.9 245 32.2
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 1.5e-16 90.9 142 43.0
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 1.9e-16 90.5 262 32.8
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 2.5e-16 90.1 262 31.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 4.3e-16 89.4 143 44.1
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.2e-15 87.8 141 44.7
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 2.1e-15 87.0 187 37.4
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 2.1e-15 87.0 142 40.8
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 2.8e-15 86.7 136 41.9
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.6e-15 86.3 148 40.5
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 6.2e-15 85.5 139 40.3
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 8.1e-15 85.1 255 29.8
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 8.1e-15 85.1 140 40.7
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.4e-14 84.3 244 34.4
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 4.0e-14 82.8 156 39.7
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 4.0e-14 82.8 138 39.1
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 6.9e-14 82.0 138 40.6
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 1.5e-13 80.9 186 34.4
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 2.0e-13 80.5 151 37.1
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 2.0e-13 80.5 138 37.7
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 4.4e-13 79.3 152 37.5
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 5.8e-13 79.0 140 41.4
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 5.8e-13 79.0 150 35.3
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 7.6e-13 78.6 246 29.7
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 7.6e-13 78.6 223 30.9
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 1.3e-12 77.8 140 40.7
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 2.2e-12 77.0 167 34.7
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 3.8e-12 76.3 268 26.1
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 3.8e-12 76.3 240 32.1
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 4.9e-12 75.9 269 27.9
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 6.4e-12 75.5 144 38.2
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 1.4e-11 74.3 138 37.0
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 1.4e-11 74.3 114 46.5
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 1.9e-11 73.9 153 36.6
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 2.4e-11 73.6 140 36.4
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 2.4e-11 73.6 141 41.1
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.2e-11 73.2 139 37.4
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 4.2e-11 72.8 139 36.0
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 5.4e-11 72.4 148 35.8
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 5.4e-11 72.4 148 34.5
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.1e-11 72.0 139 36.0
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 9.3e-11 71.6 140 35.7
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 9.3e-11 71.6 136 37.5
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.6e-10 70.9 166 31.9
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 1.6e-10 70.9 265 27.9
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 2.1e-10 70.5 170 34.7
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 2.7e-10 70.1 251 28.7
MSTRG.9456 Avicennia marina HOM05D003500 ORTHO05D003919 1.0e-09 68.2 56 66.1
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.3e-09 67.8 264 26.1
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 1.3e-09 67.8 271 29.2
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 1.3e-09 67.8 278 28.8
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.7e-09 67.4 149 36.9
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.7e-09 67.4 259 28.2
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 1.7e-09 67.4 284 25.4
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.3e-09 67.0 145 39.3
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 2.3e-09 67.0 259 27.4
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 3.0e-09 66.6 140 36.4
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 3.9e-09 66.2 144 35.4
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 3.9e-09 66.2 118 42.4
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 3.9e-09 66.2 236 31.8
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 3.9e-09 66.2 154 31.8
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 3.9e-09 66.2 309 27.8
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 5.1e-09 65.9 159 34.6
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 5.1e-09 65.9 139 33.8
BcaC01g01007 Brassica carinata HOM05D003500 ORTHO05D003919 6.6e-09 65.5 265 26.4
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 8.7e-09 65.1 145 34.5
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 8.7e-09 65.1 289 26.3
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 1.1e-08 64.7 141 30.5
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 1.5e-08 64.3 140 34.3
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 2.5e-08 63.5 272 26.8
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 2.5e-08 63.5 289 27.3
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 3.3e-08 63.2 143 35.0
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 3.3e-08 63.2 280 25.7
BcaB03g12755 Brassica carinata HOM05D003500 ORTHO05D003919 4.3e-08 62.8 278 24.8
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 4.3e-08 62.8 252 26.6
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 4.3e-08 62.8 252 26.6
A01p05660 Brassica napus HOM05D003500 ORTHO05D003919 5.6e-08 62.4 147 29.9
BraA01t00536Z Brassica rapa HOM05D003500 ORTHO05D003919 5.6e-08 62.4 147 29.9
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 7.3e-08 62.0 277 26.0
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 9.6e-08 61.6 273 24.5
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 9.6e-08 61.6 273 24.5
BcaC09g52062 Brassica carinata HOM05D003500 ORTHO05D003919 1.3e-07 61.2 147 29.9
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.3e-07 61.2 143 32.2
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.6e-07 60.8 296 28.0
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 1.6e-07 60.8 236 28.8
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.6e-07 60.8 239 32.6
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 2.8e-07 60.1 119 38.7
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 3.6e-07 59.7 147 30.6
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 3.6e-07 59.7 144 37.5
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 4.8e-07 59.3 143 33.6
CARHR240660 Cardamine hirsuta HOM05D003500 ORTHO05D003919 4.8e-07 59.3 145 30.3
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 4.8e-07 59.3 142 33.8
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 6.2e-07 58.9 143 30.8
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 6.2e-07 58.9 121 38.8
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 8.1e-07 58.5 223 26.5
BolC1t00621H Brassica oleracea HOM05D003500 ORTHO05D003919 8.1e-07 58.5 150 30.0
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 8.1e-07 58.5 135 31.9
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 8.1e-07 58.5 265 25.3
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 1.1e-06 58.2 145 31.7
THA.LOC104818564 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.1e-06 58.2 285 24.9
C01p06230 Brassica napus HOM05D003500 ORTHO05D003919 1.4e-06 57.8 147 28.6
Sp7g30440 Schrenkiella parvula HOM05D003500 ORTHO05D003919 1.8e-06 57.4 147 29.3
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 2.4e-06 57.0 220 28.6
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 6.9e-06 55.5 224 29.0
Aa31LG2G16940 Aethionema arabicum HOM05D003500 ORTHO05D003919 9.0e-06 55.1 138 29.7
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 9.0e-06 55.1 267 26.6


User provided reference genes

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