Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 0.0e+00 1384.4 755 100.0
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 6.5e-156 555.4 764 46.6
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.5e-131 474.6 588 50.3
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 1.0e-129 468.4 783 43.9
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.0e-108 398.7 717 38.8
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.1e-89 335.5 779 36.1
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 1.1e-89 335.5 779 35.7
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 9.0e-89 332.4 802 35.2
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.5e-88 331.6 806 34.1
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 9.9e-88 328.9 755 35.2
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 4.6e-85 320.1 796 33.3
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 1.2e-77 295.4 757 33.2
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.5e-75 288.5 794 32.2
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 1.4e-73 282.0 787 32.3
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.6e-72 277.7 834 32.3
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 3.4e-72 277.3 771 32.4
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 3.8e-71 273.9 936 29.6
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 1.9e-70 271.6 818 32.0
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 1.9e-70 271.6 754 31.7
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.6e-69 268.5 867 30.2
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.1e-69 268.1 751 31.7
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 2.1e-69 268.1 751 31.7
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 7.9e-69 266.2 781 32.3
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 2.5e-67 261.2 876 30.5
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 3.3e-67 260.8 770 30.9
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 9.7e-67 259.2 770 31.6
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.2e-66 258.1 762 30.2
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 6.3e-66 256.5 728 32.8
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 6.9e-65 253.1 770 31.0
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 1.2e-64 252.3 751 33.2
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 3.4e-64 250.8 783 32.2
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 3.8e-63 247.3 828 29.6
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 8.5e-63 246.1 759 30.7
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 1.1e-62 245.7 763 30.0
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.4e-62 245.4 437 38.2
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 1.9e-62 245.0 767 30.5
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 4.2e-62 243.8 766 30.5
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 6.1e-61 240.0 770 30.0
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 6.1e-61 240.0 723 32.0
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 7.9e-61 239.6 847 31.3
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 7.9e-61 239.6 885 29.8
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.3e-60 238.0 776 31.3
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 3.9e-60 237.3 797 30.1
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.5e-59 235.3 782 30.4
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 6.3e-58 229.9 761 30.6
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 6.3e-58 229.9 756 33.5
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 8.2e-58 229.6 773 30.7
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 1.4e-57 228.8 952 26.7
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 4.1e-57 227.3 416 37.7
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 5.9e-56 223.4 763 30.9
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 6.5e-55 219.9 782 29.3
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 4.2e-54 217.2 751 30.6
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 2.7e-53 214.5 739 29.2
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.8e-52 211.8 787 28.8
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 8.8e-52 209.5 745 28.5
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 2.0e-51 208.4 858 28.1
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 2.6e-51 208.0 756 29.6
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 3.3e-51 207.6 879 29.2
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 7.4e-51 206.5 755 29.9
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 1.3e-50 205.7 843 28.8
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.8e-49 201.8 756 29.0
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 5.3e-49 200.3 868 27.6
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 1.7e-47 195.3 783 28.5
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 5.0e-47 193.7 779 29.7
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 8.5e-47 193.0 681 29.8
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 8.5e-47 193.0 777 28.8
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.5e-46 191.4 682 30.5
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 1.2e-45 189.1 756 27.0
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 4.7e-45 187.2 697 29.3
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 8.0e-45 186.4 778 28.0
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.4e-44 185.7 872 30.2
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.3e-44 184.9 681 30.0
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 2.3e-44 184.9 814 27.4
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.2e-44 183.7 668 29.9
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 1.5e-43 182.2 761 27.5
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 2.6e-43 181.4 976 25.9
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.7e-39 168.7 794 28.6
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.7e-39 168.7 767 27.1
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 3.8e-39 167.5 765 28.0
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.5e-39 166.8 790 28.0
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 3.2e-38 164.5 673 29.9
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 1.0e-36 159.5 418 32.1
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 8.8e-36 156.4 727 27.4
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.3e-35 154.5 773 27.2
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 4.4e-35 154.1 692 27.9
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 9.7e-35 152.9 773 28.3
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 9.7e-35 152.9 717 26.5
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 8.2e-34 149.8 958 24.8
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.1e-33 149.4 779 26.2
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 2.4e-33 148.3 737 27.1
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 2.4e-33 148.3 783 26.7
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.6e-32 145.6 804 27.9
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 2.0e-32 145.2 778 26.3
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 3.5e-32 144.4 102 70.6
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 1.0e-31 142.9 758 26.6
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 2.2e-31 141.7 723 25.2
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 2.9e-31 141.4 801 26.0
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 3.8e-31 141.0 757 29.2
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 3.2e-30 137.9 792 26.9
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 1.2e-29 136.0 793 25.2
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 2.7e-29 134.8 800 25.6
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 2.7e-29 134.8 444 31.3
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 2.3e-28 131.7 958 23.9
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 2.0e-27 128.6 797 25.1
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 1.3e-26 125.9 804 25.5
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 2.2e-26 125.2 796 24.5
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 2.8e-26 124.8 729 25.8
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 2.8e-26 124.8 540 27.8
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 8.3e-26 123.2 756 24.6
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 9.1e-25 119.8 608 25.2
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.5e-24 117.5 634 26.7
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 7.7e-24 116.7 771 25.6
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 1.3e-23 115.9 765 25.1
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 1.3e-23 115.9 786 28.6
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 1.3e-23 115.9 548 27.2
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 2.3e-23 115.2 816 24.5
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 2.9e-23 114.8 774 25.8
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 8.0e-21 106.7 581 25.0
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.7e-18 99.0 762 23.6
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 1.4e-17 95.9 125 42.4
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 4.1e-17 94.4 784 24.0
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 7.8e-16 90.1 399 26.6
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 3.3e-14 84.7 371 27.8
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 4.7e-13 80.9 806 22.7
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 6.1e-13 80.5 119 42.0
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 4.0e-12 77.8 337 30.0
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 5.2e-12 77.4 557 25.1
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 6.8e-12 77.0 188 29.3
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 1.7e-10 72.4 150 40.0
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 2.2e-10 72.0 114 40.4
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 5.4e-09 67.4 144 31.9
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.2e-08 66.2 131 33.6
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.6e-08 65.9 167 35.3
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 6.0e-08 63.9 148 32.4
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 7.8e-08 63.5 196 28.1
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 2.3e-07 62.0 100 42.0
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 3.0e-07 61.6 59 49.2
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 1.1e-06 59.7 154 30.5


User provided reference genes

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