Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14773 Striga asiatica HOM05D007722 ORTHO05D009730 1.3e-69 266.2 127 100.0
Migut.D01071 Erythranthe guttata HOM05D007722 ORTHO05D009730 1.0e-29 133.7 135 52.6
unitig_0.g1117 Utricularia gibba HOM05D007722 ORTHO05D009730 1.6e-22 109.8 127 50.4
Oeu045155.1 Olea europaea HOM05D007722 ORTHO05D009730 1.8e-21 106.3 134 49.3
Migut.I00773 Erythranthe guttata HOM05D042311 ORTHO05D035177 4.1e-18 95.1 110 47.3
Dinv30597 Davidia involucrata HOM05D007722 ORTHO05D009730 5.3e-18 94.7 101 51.5
TAR636G1020 Trochodendron aralioides HOM05D007722 ORTHO05D009730 5.3e-18 94.7 85 55.3
Rhsim08G0213600 Rhododendron simsii HOM05D007722 ORTHO05D009730 5.9e-17 91.3 75 57.3
Prupe.3G085400 Prunus persica HOM05D007722 ORTHO05D009730 3.6e-14 82.0 73 57.5
Nn2g12058 Nelumbo nucifera HOM05D007722 ORTHO05D009730 6.1e-14 81.3 93 46.2
Aqoxy7G03685 Aquilegia oxysepala HOM05D007722 ORTHO05D009730 7.9e-14 80.9 92 50.0
GSVIVG01017323001 Vitis vinifera HOM05D007722 ORTHO05D009730 1.8e-13 79.7 138 39.1
Gohir.D10G075700 Gossypium hirsutum HOM05D007722 ORTHO05D009730 3.9e-13 78.6 82 54.9
CSS0036618 Camellia sinensis var. sinensis HOM05D007722 ORTHO05D009730 5.1e-13 78.2 94 46.8
Duzib160G0092 Durio zibethinus HOM05D007722 ORTHO05D009730 5.1e-13 78.2 70 54.3
Gohir.A10G073900 Gossypium hirsutum HOM05D007722 ORTHO05D009730 5.1e-13 78.2 118 46.6
MD17G1210100 Malus domestica HOM05D007722 ORTHO05D009730 5.1e-13 78.2 73 54.8
COL.COLO4_12955 Corchorus olitorius HOM05D007722 ORTHO05D009730 6.7e-13 77.8 135 40.0
MBI01_g35411_MAGBIO Magnolia biondii HOM05D007722 ORTHO05D009730 6.7e-13 77.8 66 57.6
Haze_16545 Corylus avellana HOM05D007722 ORTHO05D009730 1.1e-12 77.0 137 40.9
FvH4_6g29860 Fragaria vesca HOM05D007722 ORTHO05D009730 1.9e-12 76.3 131 40.5
FAN14G1239 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.9e-12 76.3 131 40.5
Cfa001975 Carpinus fangiana HOM05D007722 ORTHO05D009730 3.3e-12 75.5 118 44.1
ECA232G4504 Erigeron canadensis HOM05D000985 ORTHO05D000866 3.3e-12 75.5 73 53.4
Gorai.011G083600 Gossypium raimondii HOM05D007722 ORTHO05D009730 3.3e-12 75.5 82 52.4
CANSAT56G0372 Cannabis sativa HOM05D007722 ORTHO05D009730 9.7e-12 73.9 134 36.6
PGSC0003DMG401000617 Solanum tuberosum HOM05D007722 ORTHO05D009730 9.7e-12 73.9 100 44.0
FAN09G0448 Fragaria x ananassa HOM05D007722 ORTHO05D009730 1.3e-11 73.6 96 46.9
Psat7g256360 Pisum sativum HOM05D007722 ORTHO05D009730 2.2e-11 72.8 76 51.3
Thecc.06G022100 Theobroma cacao HOM05D007722 ORTHO05D009730 2.2e-11 72.8 121 42.1
Phvul.010G155500 Phaseolus vulgaris HOM05D007722 ORTHO05D009730 4.8e-11 71.6 84 50.0
Gohir.A05G126200 Gossypium hirsutum HOM05D007722 ORTHO05D009730 8.2e-11 70.9 72 50.0
Gohir.D05G127100 Gossypium hirsutum HOM05D007722 ORTHO05D009730 8.2e-11 70.9 72 50.0
Gorai.009G131200 Gossypium raimondii HOM05D007722 ORTHO05D009730 8.2e-11 70.9 72 50.0
Sed0026756 Sechium edule HOM05D007722 ORTHO05D009730 1.1e-10 70.5 137 39.4
Sc10g0005890 Simmondsia chinensis HOM05D007722 ORTHO05D009730 1.1e-10 70.5 135 39.3
Solyc03g116660.3 Solanum lycopersicum HOM05D007722 ORTHO05D009730 1.1e-10 70.5 130 38.5
EL10Ac9g21908 Beta vulgaris HOM05D007722 ORTHO05D009730 1.4e-10 70.1 133 38.3
DCAR_025509 Daucus carota HOM05D007722 ORTHO05D009730 1.4e-10 70.1 137 38.0
Sopen03g035570 Solanum pennellii HOM05D007722 ORTHO05D009730 1.4e-10 70.1 130 38.5
VMungo0331G1522 Vigna mungo HOM05D007722 ORTHO05D009730 3.1e-10 68.9 118 39.8
Nitab4.5_0007793g0010 Nicotiana tabacum HOM05D007722 ORTHO05D009730 6.9e-10 67.8 49 61.2
PGR102G2260 Punica granatum HOM05D007722 ORTHO05D009730 6.9e-10 67.8 104 43.3
HPP92_000666 Vanilla planifolia HOM05D007722 ORTHO05D009730 6.9e-10 67.8 68 52.9
Nitab4.5_0011590g0030 Nicotiana tabacum HOM05D007722 ORTHO05D009730 9.1e-10 67.4 48 62.5
Glyma.07G030600 Glycine max HOM05D007722 ORTHO05D009730 1.5e-09 66.6 103 42.7
Zm00001eb221290 Zea mays HOM05D007722 ORTHO05D009730 1.5e-09 66.6 69 49.3
PSO210G5680 Papaver somniferum HOM05D007722 ORTHO05D009730 2.6e-09 65.9 86 41.9
SalBow6G5544 Salvia bowleyana HOM05D042311 ORTHO05D035177 2.6e-09 65.9 85 48.2
Medtr4g010270 Medicago truncatula HOM05D007722 ORTHO05D009730 3.4e-09 65.5 51 60.8
Os01g0392100 Oryza sativa ssp. japonica HOM05D007722 ORTHO05D009730 3.4e-09 65.5 69 49.3
QL05p029543 Quercus lobata HOM05D007722 ORTHO05D009730 3.4e-09 65.5 49 61.2
Lalb_Chr25g0279351 Lupinus albus HOM05D007722 ORTHO05D009730 5.9e-09 64.7 72 47.2
CiPaw.01G246700 Carya illinoinensis HOM05D007722 ORTHO05D009730 7.7e-09 64.3 66 47.0
Eucgr.F03868 Eucalyptus grandis HOM05D007722 ORTHO05D009730 7.7e-09 64.3 60 55.0
Eucgr.L02714 Eucalyptus grandis HOM05D007722 ORTHO05D009730 7.7e-09 64.3 60 55.0
HanXRQChr16g0500401 Helianthus annuus HOM05D007722 ORTHO05D009730 1.0e-08 63.9 133 35.3
PSO210G0183 Papaver somniferum HOM05D007722 ORTHO05D009730 1.0e-08 63.9 107 38.3
Potri.001G192500 Populus trichocarpa HOM05D007722 ORTHO05D009730 1.0e-08 63.9 66 50.0
BraA01t03884Z Brassica rapa HOM05D007722 ORTHO05D009730 1.7e-08 63.2 107 43.0
Lalb_Chr04g0262381 Lupinus albus HOM05D007722 ORTHO05D009730 2.9e-08 62.4 73 47.9
THA.LOC104818136 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 2.9e-08 62.4 132 34.1
CARHR090870 Cardamine hirsuta HOM05D007722 ORTHO05D009730 3.8e-08 62.0 62 48.4
THA.LOC104810506 Tarenaya hassleriana HOM05D007722 ORTHO05D009730 3.8e-08 62.0 135 37.0
Manes.04G113466 Manihot esculenta HOM05D007722 ORTHO05D009730 5.0e-08 61.6 96 46.9
SalBow6G0082 Salvia bowleyana HOM05D042311 ORTHO05D035177 5.0e-08 61.6 99 41.4
Glyma.08G212200 Glycine max HOM05D007722 ORTHO05D009730 1.1e-07 60.5 48 60.4
Lj3g0002989 Lotus japonicus HOM05D007722 ORTHO05D009730 1.1e-07 60.5 46 63.0
Manes.11G056000 Manihot esculenta HOM05D007722 ORTHO05D009730 3.2e-07 58.9 95 45.3
Peaxi162Scf00332g00773 Petunia axillaris HOM05D007722 ORTHO05D009730 4.2e-07 58.5 44 54.5
BcaB04g20904 Brassica carinata HOM05D007722 ORTHO05D009730 9.4e-07 57.4 70 47.1
BcaC09g48556 Brassica carinata HOM05D007722 ORTHO05D009730 9.4e-07 57.4 55 52.7
CDE06G0954 Ceratophyllum demersum HOM05D007722 ORTHO05D009730 9.4e-07 57.4 63 46.0
ClCG09G002890 Citrullus lanatus HOM05D007722 ORTHO05D009730 1.2e-06 57.0 64 46.9
Carub.0003s1552 Capsella rubella HOM05D007722 ORTHO05D009730 2.7e-06 55.8 96 37.5
Thhalv10021781m.g Eutrema salsugineum HOM05D007722 ORTHO05D009730 2.7e-06 55.8 54 50.0
A01p38330 Brassica napus HOM05D007722 ORTHO05D009730 4.7e-06 55.1 50 56.0


User provided reference genes

Program Settings