Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14762 Striga asiatica HOM05D017394 ORTHO05D001737 1.8e-93 345.9 175 100.0
SGA_v2.0_scaffold113G31714 Striga asiatica HOM05D017394 ORTHO05D001737 1.9e-87 325.9 175 94.3
SGA_v2.0_scaffold142G35665 Striga asiatica HOM05D017394 ORTHO05D001737 1.2e-76 290.0 173 86.7
SGA_v2.0_scaffold191G40486 Striga asiatica HOM05D017394 ORTHO05D001737 1.8e-45 186.4 175 64.6
SGA_v2.0_scaffold288G47234 Striga asiatica HOM05D017394 ORTHO05D001737 3.0e-40 169.1 183 61.2
SGA_v2.0_scaffold332G48948 Striga asiatica HOM05D017394 ORTHO05D001737 6.2e-33 144.8 139 61.2
SGA_v2.0_scaffold50G18424 Striga asiatica HOM05D017394 ORTHO05D001737 1.7e-30 136.7 112 72.3
SGA_v2.0_scaffold143G35747 Striga asiatica HOM05D017394 ORTHO05D001737 3.7e-30 135.6 110 70.9
Oeu026349.1 Olea europaea HOM05D001878 ORTHO05D001737 6.2e-17 91.7 171 42.1
Oeu037430.1 Olea europaea HOM05D001878 ORTHO05D001737 1.1e-16 90.9 149 45.0
unitig_0.g2758 Utricularia gibba HOM05D001878 ORTHO05D001737 1.1e-16 90.9 140 45.7
unitig_748.g7119 Utricularia gibba HOM05D001878 ORTHO05D001737 2.3e-16 89.7 139 45.3
SalBow5G0976 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.5e-15 87.0 128 45.3
SalBow5G4762 Salvia bowleyana HOM05D007698 ORTHO05D009663 1.5e-15 87.0 128 45.3
Oeu019262.1 Olea europaea HOM05D001878 ORTHO05D001737 2.0e-15 86.7 149 43.0
MSTRG.4940 Avicennia marina HOM05D001878 ORTHO05D001737 7.6e-15 84.7 193 36.3
Cc02_g25370 Coffea canephora HOM05D001878 ORTHO05D001737 3.2e-13 79.3 144 38.9
Lsat_1_v5_gn_4_40001 Lactuca sativa HOM05D001878 ORTHO05D001737 6.0e-12 75.1 148 38.5
Peaxi162Scf00853g00433 Petunia axillaris HOM05D001878 ORTHO05D001737 1.0e-11 74.3 177 36.2
CAN.G756.42 Capsicum annuum HOM05D001878 ORTHO05D001737 3.9e-11 72.4 138 37.7
Migut.N01727 Erythranthe guttata HOM05D001878 ORTHO05D001737 3.9e-11 72.4 96 45.8
Potri.002G139500 Populus trichocarpa HOM05D001878 ORTHO05D001737 3.9e-11 72.4 150 38.0
Potri.014G051200 Populus trichocarpa HOM05D001878 ORTHO05D001737 5.1e-11 72.0 146 39.0
Nitab4.5_0011684g0010 Nicotiana tabacum HOM05D001878 ORTHO05D001737 6.6e-11 71.6 140 37.9
Sabra14G0036200 Salix brachista HOM05D001878 ORTHO05D001737 8.6e-11 71.2 142 40.8
Sabra14G0038300 Salix brachista HOM05D001878 ORTHO05D001737 8.6e-11 71.2 142 40.8
COL.COLO4_18392 Corchorus olitorius HOM05D001878 ORTHO05D001737 2.5e-10 69.7 129 38.8
Nitab4.5_0000563g0150 Nicotiana tabacum HOM05D001878 ORTHO05D001737 2.5e-10 69.7 175 33.7
PGSC0003DMG400001696 Solanum tuberosum HOM05D001878 ORTHO05D001737 5.6e-10 68.6 147 37.4
Sopen01g035660 Solanum pennellii HOM05D001878 ORTHO05D001737 9.6e-10 67.8 147 35.4
Glyma.07G254502 Glycine max HOM05D001878 ORTHO05D001737 1.6e-09 67.0 132 38.6
Gohir.A08G139800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 1.6e-09 67.0 207 32.4
SGA_v2.0_scaffold143G35746 Striga asiatica HOM05D056464 ORTHO05D001737 1.6e-09 67.0 39 87.2
TWI14G1354 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 2.1e-09 66.6 150 36.0
Cpa.g.sc41.83 Carica papaya HOM05D001878 ORTHO05D001737 2.8e-09 66.2 148 37.2
Duzib133G0474 Durio zibethinus HOM05D001878 ORTHO05D001737 2.8e-09 66.2 111 41.4
Gohir.D08G160800 Gossypium hirsutum HOM05D001878 ORTHO05D001737 2.8e-09 66.2 195 30.8
Gorai.004G167100 Gossypium raimondii HOM05D001878 ORTHO05D001737 2.8e-09 66.2 195 30.8
TWI59G0138 Tripterygium wilfordii HOM05D001878 ORTHO05D001737 2.8e-09 66.2 153 35.3
Thecc.01G400100 Theobroma cacao HOM05D001878 ORTHO05D001737 3.6e-09 65.9 111 41.4
Lsat_1_v5_gn_1_84200 Lactuca sativa HOM05D001878 ORTHO05D001737 4.7e-09 65.5 157 35.0
Solyc01g088820.2 Solanum lycopersicum HOM05D001878 ORTHO05D001737 4.7e-09 65.5 132 36.4
Atru.chr5.102 Acer truncatum HOM05D001878 ORTHO05D001737 6.2e-09 65.1 137 36.5
DCAR_029489 Daucus carota HOM05D001878 ORTHO05D001737 6.2e-09 65.1 101 39.6
Glyma.08G051800 Glycine max HOM05D001878 ORTHO05D001737 6.2e-09 65.1 102 43.1
Lalb_Chr13g0290701 Lupinus albus HOM05D001878 ORTHO05D001737 6.2e-09 65.1 143 34.3
Phvul.008G049300 Phaseolus vulgaris HOM05D001878 ORTHO05D001737 6.2e-09 65.1 139 35.3
Psat3g099720 Pisum sativum HOM05D001878 ORTHO05D001737 8.1e-09 64.7 137 38.0
Glyma.18G248000 Glycine max HOM05D001878 ORTHO05D001737 1.1e-08 64.3 138 37.0
VMungo1383G0933 Vigna mungo HOM05D001878 ORTHO05D001737 1.4e-08 63.9 139 35.3
Cfa011046 Carpinus fangiana HOM05D001878 ORTHO05D001737 1.8e-08 63.5 111 39.6
Haze_02877 Corylus avellana HOM05D001878 ORTHO05D001737 1.8e-08 63.5 111 39.6
Glyma.09G245300 Glycine max HOM05D001878 ORTHO05D001737 1.8e-08 63.5 148 33.8
Phvul.003G097500 Phaseolus vulgaris HOM05D001878 ORTHO05D001737 1.8e-08 63.5 102 42.2
VMungo1215G1720 Vigna mungo HOM05D001878 ORTHO05D001737 1.8e-08 63.5 102 42.2
PGR042G1541 Punica granatum HOM05D001878 ORTHO05D001737 2.4e-08 63.2 141 39.0
Psat4g031080 Pisum sativum HOM05D001878 ORTHO05D001737 3.1e-08 62.8 135 37.0
Rhsim01G0141600 Rhododendron simsii HOM05D001878 ORTHO05D001737 3.1e-08 62.8 125 36.8
CiPaw.13G024400 Carya illinoinensis HOM05D001878 ORTHO05D001737 4.0e-08 62.4 110 40.9
Ciclev10020863m.g Citrus clementina HOM05D001878 ORTHO05D001737 4.0e-08 62.4 112 39.3
Lsat_1_v5_gn_1_84280 Lactuca sativa HOM05D001878 ORTHO05D001737 5.2e-08 62.0 140 36.4
RcHm_v2.0_Chr7g0205651 Rosa chinensis HOM05D001878 ORTHO05D001737 5.2e-08 62.0 120 39.2
Sp4g26780 Schrenkiella parvula HOM05D001878 ORTHO05D001737 5.2e-08 62.0 118 38.1
CANSAT25G3641 Cannabis sativa HOM05D001878 ORTHO05D001737 6.8e-08 61.6 115 40.0
CiPaw.14G018500 Carya illinoinensis HOM05D001878 ORTHO05D001737 6.8e-08 61.6 127 38.6
Ca_21569_v3 Cicer arietinum L. HOM05D001878 ORTHO05D001737 6.8e-08 61.6 102 41.2
QL04p028592 Quercus lobata HOM05D001878 ORTHO05D001737 6.8e-08 61.6 111 39.6
QL04p028713 Quercus lobata HOM05D001878 ORTHO05D001737 6.8e-08 61.6 111 39.6
Duzib268G0102 Durio zibethinus HOM05D001878 ORTHO05D001737 1.2e-07 60.8 111 39.6
MD07G1097300 Malus domestica HOM05D001878 ORTHO05D001737 1.2e-07 60.8 165 33.9
Manes.05G056800 Manihot esculenta HOM05D001878 ORTHO05D001737 1.2e-07 60.8 151 35.1
Lj1g0024989 Lotus japonicus HOM05D001878 ORTHO05D001737 1.5e-07 60.5 134 35.8
CSS0031983 Camellia sinensis var. sinensis HOM05D001878 ORTHO05D001737 4.4e-07 58.9 155 30.3
Aa31LG1G26270 Aethionema arabicum HOM05D001878 ORTHO05D001737 5.8e-07 58.5 191 31.9
Ah.01g019780 Amaranthus hybridus HOM05D001878 ORTHO05D001737 7.6e-07 58.2 101 38.6
BcaC02g12281 Brassica carinata HOM05D001878 ORTHO05D001737 7.6e-07 58.2 136 35.3
C04p05690 Brassica napus HOM05D001878 ORTHO05D001737 7.6e-07 58.2 136 35.3
RcHm_v2.0_Chr1g0345291 Rosa chinensis HOM05D001878 ORTHO05D001737 9.9e-07 57.8 110 37.3
TPR.G28130 Trifolium pratense HOM05D001878 ORTHO05D001737 1.3e-06 57.4 111 36.9
Nn1g00752 Nelumbo nucifera HOM05D001878 ORTHO05D001737 1.7e-06 57.0 114 36.8
Medtr7g081190 Medicago truncatula HOM05D001878 ORTHO05D001737 2.2e-06 56.6 137 35.8
FAN10G3061 Fragaria x ananassa HOM05D001878 ORTHO05D001737 2.9e-06 56.2 153 34.0
Lj4g0024312 Lotus japonicus HOM05D001878 ORTHO05D001737 2.9e-06 56.2 136 35.3
PSO782G1295 Papaver somniferum HOM05D001878 ORTHO05D001737 4.9e-06 55.5 147 31.3
Dinv43604 Davidia involucrata HOM05D001878 ORTHO05D001737 6.4e-06 55.1 99 36.4
MD02G1219900 Malus domestica HOM05D001878 ORTHO05D001737 6.4e-06 55.1 159 32.1
Dinv44041 Davidia involucrata HOM05D001878 ORTHO05D001737 8.4e-06 54.7 99 38.4
HanXRQChr01g0017711 Helianthus annuus HOM05D001878 ORTHO05D001737 8.4e-06 54.7 132 36.4
MBI04_g13859_MAGBIO Magnolia biondii HOM05D001878 ORTHO05D001737 8.4e-06 54.7 141 35.5
SHI13627 Sapria himalayana HOM05D001878 ORTHO05D001737 8.4e-06 54.7 114 34.2


User provided reference genes

Program Settings