Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.0e-179 633.3 319 100.0
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.1e-149 533.5 319 82.8
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 1.2e-135 486.9 319 77.7
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 1.0e-134 483.8 322 76.7
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 5.1e-134 481.5 325 74.8
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.6e-132 476.5 328 71.6
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 3.1e-131 472.2 323 72.1
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 5.2e-131 471.5 319 75.5
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 6.8e-131 471.1 327 71.3
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.6e-130 469.2 327 70.9
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 3.4e-130 468.8 324 72.5
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 7.6e-130 467.6 326 72.1
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 9.9e-130 467.2 327 70.3
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 6.4e-129 464.5 324 71.3
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.1e-128 463.8 325 71.1
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 3.2e-128 462.2 327 70.9
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 4.1e-128 461.8 328 68.9
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 9.2e-128 460.7 328 68.9
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.6e-127 459.9 328 68.6
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 1.0e-126 457.2 323 69.3
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 1.9e-125 453.0 323 69.3
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.2e-124 450.3 320 69.4
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 3.6e-124 448.7 328 66.2
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.1e-123 447.2 320 69.1
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-123 446.8 320 69.1
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.4e-123 446.8 324 68.8
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 2.4e-123 446.0 320 69.7
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 3.1e-123 445.7 320 68.4
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 3.1e-123 445.7 320 68.8
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 3.1e-123 445.7 317 69.7
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 4.0e-123 445.3 320 69.4
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.2e-122 443.7 320 68.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 1.2e-122 443.7 328 65.2
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 1.5e-122 443.4 319 68.0
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 2.6e-122 442.6 316 69.6
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.6e-122 442.6 320 67.8
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 5.8e-122 441.4 328 65.2
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.6e-122 441.0 322 68.3
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 7.6e-122 441.0 322 66.8
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 9.9e-122 440.7 320 68.4
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 2.9e-121 439.1 320 67.8
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 3.8e-121 438.7 321 67.6
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 4.9e-121 438.3 320 68.1
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 6.4e-121 438.0 320 68.1
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 8.4e-121 437.6 320 68.1
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 3.2e-120 435.6 322 66.1
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 7.1e-120 434.5 323 67.8
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 9.3e-120 434.1 320 68.1
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 1.6e-119 433.3 320 66.9
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 1.6e-119 433.3 320 67.2
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.1e-119 433.0 320 67.8
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 2.7e-119 432.6 320 67.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.3e-118 429.5 320 67.5
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 3.0e-118 429.1 321 66.4
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 5.1e-118 428.3 320 66.2
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.1e-117 427.2 320 66.6
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.9e-117 426.4 320 66.6
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.5e-117 426.0 320 66.9
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 2.5e-117 426.0 320 66.6
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 3.3e-117 425.6 320 66.9
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 4.3e-117 425.2 320 66.6
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.3e-117 425.2 320 66.6
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 5.6e-117 424.9 320 66.2
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 7.3e-117 424.5 320 66.2
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 7.3e-117 424.5 328 64.9
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 9.6e-117 424.1 320 66.6
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 1.3e-116 423.7 320 67.2
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 2.8e-116 422.5 320 66.2
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 2.8e-116 422.5 320 66.6
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 2.8e-116 422.5 320 65.6
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.8e-116 422.5 319 64.9
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 1.8e-115 419.9 320 64.4
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 4.0e-115 418.7 320 65.9
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 5.3e-115 418.3 320 65.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 2.0e-114 416.4 320 65.3
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 3.4e-114 415.6 320 65.6
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 3.4e-114 415.6 320 65.6
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 4.4e-114 415.2 320 65.6
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.7e-113 413.3 322 64.6
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 2.2e-113 412.9 319 62.7
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-113 412.5 317 66.2
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 3.2e-112 409.1 316 64.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 5.4e-112 408.3 319 62.7
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 5.1e-110 401.7 303 64.0
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-109 399.8 317 64.7
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.8e-108 396.0 317 63.1
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 2.6e-106 389.4 326 59.5
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 2.6e-106 389.4 318 60.4
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-105 386.0 300 65.3
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 1.4e-104 383.6 292 64.4
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.9e-104 383.3 300 65.0
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.9e-102 375.6 304 64.1
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.8e-99 366.7 317 59.0
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 2.4e-99 366.3 317 59.6
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 1.9e-96 356.7 310 59.4
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 4.2e-96 355.5 319 59.6
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 6.7e-94 348.2 326 54.3
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 1.1e-93 347.4 314 53.8
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 8.2e-92 341.3 316 52.8
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 2.9e-89 332.8 258 63.6
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 4.2e-88 328.9 292 58.6
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 1.2e-87 327.4 319 51.7
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 6.1e-87 325.1 258 63.6
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 4.3e-85 318.9 315 50.5
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.0e-82 310.1 257 63.4
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 1.0e-81 307.8 256 62.5
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.1e-80 304.3 214 70.6
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.9e-80 303.5 320 48.1
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 5.7e-77 292.0 286 54.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 6.3e-76 288.5 284 54.6
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-68 264.2 306 50.0
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 2.6e-66 256.5 217 58.5
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 8.3e-44 181.8 296 38.5
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.2e-37 161.4 129 60.5
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 4.6e-34 149.4 121 60.3
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 1.2e-31 141.4 272 34.9
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.6e-26 122.9 97 60.8
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.0e-25 120.2 115 54.8
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 5.0e-25 119.4 111 53.2
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 6.6e-25 119.0 364 29.9
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 7.3e-24 115.5 115 53.9
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 1.7e-20 104.4 62 77.4
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.4e-20 102.4 97 54.6
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 7.8e-18 95.5 72 62.5
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 3.9e-17 93.2 325 27.4
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 4.4e-13 79.7 62 59.7


User provided reference genes

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