Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14721 Striga asiatica HOM05D005237 ORTHO05D006189 3.2e-98 361.7 175 100.0
Migut.K00410 Erythranthe guttata HOM05D005237 ORTHO05D006189 1.5e-92 342.8 172 95.9
SalBow1G1295 Salvia bowleyana HOM05D005237 ORTHO05D006189 2.2e-91 339.0 175 93.1
Rhsim01G0059600 Rhododendron simsii HOM05D005237 ORTHO05D006189 1.9e-90 335.9 175 91.4
unitig_748.g7174 Utricularia gibba HOM05D005237 ORTHO05D006189 1.9e-90 335.9 174 92.0
GSVIVG01012837001 Vitis vinifera HOM05D005237 ORTHO05D006189 3.2e-90 335.1 175 92.6
MD15G1163100 Malus domestica HOM05D005237 ORTHO05D006189 4.2e-90 334.7 174 92.0
Oeu000523.1 Olea europaea HOM05D005237 ORTHO05D006189 4.2e-90 334.7 175 92.0
vmacro07739 Vaccinium macrocarpon HOM05D005237 ORTHO05D006189 7.1e-90 334.0 174 92.5
Duzib150G0783 Durio zibethinus HOM05D005237 ORTHO05D006189 9.3e-90 333.6 175 91.4
Actinidia07336 Actinidia chinensis HOM05D005237 ORTHO05D006189 1.2e-89 333.2 175 92.0
QL02p090325 Quercus lobata HOM05D005237 ORTHO05D006189 2.1e-89 332.4 174 92.0
Dinv41456 Davidia involucrata HOM05D005237 ORTHO05D006189 2.7e-89 332.0 175 90.9
Eucgr.C04376 Eucalyptus grandis HOM05D005237 ORTHO05D006189 6.1e-89 330.9 175 90.3
Lalb_Chr13g0301391 Lupinus albus HOM05D005237 ORTHO05D006189 1.3e-88 329.7 175 89.7
MD02G1020300 Malus domestica HOM05D005237 ORTHO05D006189 1.3e-88 329.7 174 90.8
Ciclev10009685m.g Citrus clementina HOM05D005237 ORTHO05D006189 1.8e-88 329.3 175 90.9
CsaV3_2G003270 Cucumis sativus L. HOM05D005237 ORTHO05D006189 3.0e-88 328.6 175 90.3
CiPaw.03G250600 Carya illinoinensis HOM05D005237 ORTHO05D006189 3.9e-88 328.2 175 90.3
Glyma.17G108800 Glycine max HOM05D005237 ORTHO05D006189 3.9e-88 328.2 175 89.7
Gohir.A08G089300 Gossypium hirsutum HOM05D005237 ORTHO05D006189 3.9e-88 328.2 175 90.9
Lj7A437T44 Lonicera japonica HOM05D005237 ORTHO05D006189 3.9e-88 328.2 173 90.8
ClCG11G003410 Citrullus lanatus HOM05D005237 ORTHO05D006189 5.1e-88 327.8 175 90.3
Peaxi162Scf00088g00918 Petunia axillaris HOM05D005237 ORTHO05D006189 5.1e-88 327.8 174 90.2
Prupe.7G251500 Prunus persica HOM05D005237 ORTHO05D006189 5.1e-88 327.8 174 90.2
Cpa.g.sc277.15 Carica papaya HOM05D005237 ORTHO05D006189 8.7e-88 327.0 175 90.3
Phvul.003G171200 Phaseolus vulgaris HOM05D005237 ORTHO05D006189 8.7e-88 327.0 175 89.7
Lalb_Chr12g0198311 Lupinus albus HOM05D005237 ORTHO05D006189 1.1e-87 326.6 175 88.6
Psat0s3428g0040 Pisum sativum HOM05D005237 ORTHO05D006189 1.1e-87 326.6 172 90.7
Potri.018G123100 Populus trichocarpa HOM05D005237 ORTHO05D006189 1.1e-87 326.6 172 89.5
TWI32G1192 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 1.1e-87 326.6 175 89.1
FvH4_3g33280 Fragaria vesca HOM05D005237 ORTHO05D006189 1.5e-87 326.2 174 90.8
FAN11G2421 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.5e-87 326.2 174 90.8
MSTRG.26338 Avicennia marina HOM05D005237 ORTHO05D006189 1.9e-87 325.9 175 90.3
EL10Ac8g18779 Beta vulgaris HOM05D005237 ORTHO05D006189 1.9e-87 325.9 172 90.7
AT1G60430 Arabidopsis thaliana HOM05D005237 ORTHO05D006189 2.5e-87 325.5 173 88.4
arahy.Tifrunner.gnm1.ann1.E2H6AC Arachis hypogaea HOM05D005237 ORTHO05D006189 2.5e-87 325.5 175 89.1
HPP92_021894 Vanilla planifolia HOM05D005237 ORTHO05D006189 2.5e-87 325.5 173 88.4
Glyma.13G162500 Glycine max HOM05D005237 ORTHO05D006189 3.3e-87 325.1 175 89.1
Lj4g0017742 Lotus japonicus HOM05D005237 ORTHO05D006189 3.3e-87 325.1 175 89.7
Nitab4.5_0002267g0030 Nicotiana tabacum HOM05D005237 ORTHO05D006189 3.3e-87 325.1 175 88.6
Haze_25466 Corylus avellana HOM05D005237 ORTHO05D006189 4.3e-87 324.7 175 89.1
Haze_25470 Corylus avellana HOM05D005237 ORTHO05D006189 4.3e-87 324.7 175 89.1
Sabra18G0104800 Salix brachista HOM05D005237 ORTHO05D006189 4.3e-87 324.7 172 89.5
CARHR052620 Cardamine hirsuta HOM05D005237 ORTHO05D006189 5.7e-87 324.3 173 87.9
Medtr4g115900 Medicago truncatula HOM05D005237 ORTHO05D006189 5.7e-87 324.3 172 90.1
Gorai.004G108300 Gossypium raimondii HOM05D005237 ORTHO05D006189 7.4e-87 323.9 174 90.8
FAN21G0596 Fragaria x ananassa HOM05D005237 ORTHO05D006189 9.7e-87 323.6 174 90.2
PGR102G2022 Punica granatum HOM05D005237 ORTHO05D006189 9.7e-87 323.6 172 91.3
Carub.0002s0491 Capsella rubella HOM05D005237 ORTHO05D006189 1.3e-86 323.2 173 87.9
Manes.14G117900 Manihot esculenta HOM05D005237 ORTHO05D006189 1.3e-86 323.2 172 89.0
Sed0005481 Sechium edule HOM05D005237 ORTHO05D006189 1.6e-86 322.8 175 89.7
Atru.chr7.1980 Acer truncatum HOM05D005237 ORTHO05D006189 2.2e-86 322.4 174 90.2
Ah.09g224420 Amaranthus hybridus HOM05D005237 ORTHO05D006189 2.2e-86 322.4 172 89.5
Hund09300 Selenicereus undatus HOM05D005237 ORTHO05D006189 2.2e-86 322.4 172 89.5
PGSC0003DMG400030712 Solanum tuberosum HOM05D005237 ORTHO05D006189 2.2e-86 322.4 175 88.0
Aqoxy7G00028 Aquilegia oxysepala HOM05D005237 ORTHO05D006189 2.8e-86 322.0 175 88.0
DCAR_009333 Daucus carota HOM05D005237 ORTHO05D006189 2.8e-86 322.0 171 88.9
Hma1.2p1_0343F.1_g130850 Hydrangea macrophylla HOM05D005237 ORTHO05D006189 2.8e-86 322.0 173 89.0
Nn8g40617 Nelumbo nucifera HOM05D005237 ORTHO05D006189 2.8e-86 322.0 172 87.8
Aa31LG2G10030 Aethionema arabicum HOM05D005237 ORTHO05D006189 4.8e-86 321.2 173 86.7
Sed0006539 Sechium edule HOM05D005237 ORTHO05D006189 6.3e-86 320.9 175 88.6
CDE07G1573 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 8.2e-86 320.5 174 86.8
AL2G16270 Arabidopsis lyrata HOM05D005237 ORTHO05D006189 1.1e-85 320.1 173 86.7
Thhalv10023668m.g Eutrema salsugineum HOM05D005237 ORTHO05D006189 1.1e-85 320.1 172 87.8
THA.LOC104815299 Tarenaya hassleriana HOM05D005237 ORTHO05D006189 1.4e-85 319.7 171 87.7
CANSAT11G1632 Cannabis sativa HOM05D005237 ORTHO05D006189 3.1e-85 318.5 175 86.3
Sp2g04330 Schrenkiella parvula HOM05D005237 ORTHO05D006189 3.1e-85 318.5 172 87.2
Solyc07g007630.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 3.1e-85 318.5 175 86.9
Sopen07g003620 Solanum pennellii HOM05D005237 ORTHO05D006189 4.1e-85 318.2 175 86.3
RcHm_v2.0_Chr5g0060671 Rosa chinensis HOM05D005237 ORTHO05D006189 5.3e-85 317.8 174 88.5
BcaB07g31213 Brassica carinata HOM05D005237 ORTHO05D006189 1.2e-84 316.6 173 86.1
BcaC04g22225 Brassica carinata HOM05D005237 ORTHO05D006189 1.2e-84 316.6 173 86.1
Potri.006G063400 Populus trichocarpa HOM05D005237 ORTHO05D006189 2.0e-84 315.8 172 87.8
Sc18g0000220 Simmondsia chinensis HOM05D005237 ORTHO05D006189 4.5e-84 314.7 172 87.2
C09p21860 Brassica napus HOM05D002152 ORTHO05D006189 5.9e-84 314.3 172 86.0
BraA09t37380Z Brassica rapa HOM05D002152 ORTHO05D006189 5.9e-84 314.3 172 86.0
Cc07_g18400 Coffea canephora HOM05D005237 ORTHO05D006189 7.7e-84 313.9 175 88.0
A09p17560 Brassica napus HOM05D002152 ORTHO05D006189 1.3e-83 313.2 172 85.5
Nitab4.5_0000704g0070 Nicotiana tabacum HOM05D005237 ORTHO05D006189 1.7e-83 312.8 190 81.1
HanXRQChr06g0180531 Helianthus annuus HOM05D005237 ORTHO05D006189 2.9e-83 312.0 172 85.5
CiPaw.04G176700 Carya illinoinensis HOM05D005237 ORTHO05D006189 5.0e-83 311.2 175 86.3
ECA236G1442 Erigeron canadensis HOM05D005237 ORTHO05D006189 6.5e-83 310.8 172 85.5
Zm00001eb238940 Zea mays HOM05D005237 ORTHO05D006189 1.4e-82 309.7 173 85.0
Lsat_1_v5_gn_8_61340 Lactuca sativa HOM05D005237 ORTHO05D006189 1.9e-82 309.3 172 84.3
Zm00001eb238960 Zea mays HOM05D005237 ORTHO05D006189 1.9e-82 309.3 172 85.5
Zm00001eb238970 Zea mays HOM05D005237 ORTHO05D006189 1.9e-82 309.3 172 85.5
Zm00001eb438640 Zea mays HOM05D005237 ORTHO05D006189 1.9e-82 309.3 172 85.5
Zm00001eb438650 Zea mays HOM05D005237 ORTHO05D006189 1.9e-82 309.3 172 85.5
CSS0004544 Camellia sinensis var. sinensis HOM05D005237 ORTHO05D006189 1.6e-81 306.2 226 69.9
SEGI_28631 Sequoiadendron giganteum HOM05D005237 ORTHO05D006189 2.7e-81 305.4 172 84.9
Zm00001eb150940 Zea mays HOM05D005237 ORTHO05D006189 2.7e-81 305.4 172 84.9
MBI14_g10734_MAGBIO Magnolia biondii HOM05D005237 ORTHO05D006189 1.8e-80 302.8 181 82.3
Gohir.D05G014800 Gossypium hirsutum HOM05D005237 ORTHO05D006189 2.5e-79 298.9 173 82.1
Dinv36460 Davidia involucrata HOM05D005237 ORTHO05D006189 5.7e-79 297.7 159 89.9
Gohir.A05G013700 Gossypium hirsutum HOM05D005237 ORTHO05D006189 5.7e-79 297.7 173 81.5
Gorai.009G014900 Gossypium raimondii HOM05D005237 ORTHO05D006189 8.2e-78 293.9 175 81.1
Gohir.D08G100500 Gossypium hirsutum HOM05D005237 ORTHO05D006189 5.3e-77 291.2 158 90.5
SHI03217 Sapria himalayana HOM05D005237 ORTHO05D006189 7.7e-76 287.3 165 82.4
CDE04G0420 Ceratophyllum demersum HOM05D005237 ORTHO05D006189 2.6e-71 272.3 151 86.8
ATR0580G166 Amborella trichopoda HOM05D005237 ORTHO05D006189 1.3e-70 270.0 153 86.9
Pp3c3_23320 Physcomitrium patens HOM05D005237 ORTHO05D006189 6.3e-70 267.7 174 69.5
Mapoly0002s0013 Marchantia polymorpha HOM05D005237 ORTHO05D006189 2.4e-69 265.8 176 71.0
Pp3c10_12220 Physcomitrium patens HOM05D005237 ORTHO05D006189 3.1e-69 265.4 174 69.5
BolC9t55091H Brassica oleracea HOM05D002152 ORTHO05D002737 2.6e-68 262.3 153 83.7
SMO356G0108 Selaginella moellendorffii HOM05D005237 ORTHO05D006189 5.9e-68 261.2 174 69.0
MELO3C004473.2 Cucumis melo HOM05D005237 ORTHO05D006189 8.5e-67 257.3 138 91.3
PSO675G7544 Papaver somniferum HOM05D005237 ORTHO05D006189 1.1e-63 246.9 147 82.3
VMungo1215G1009 Vigna mungo HOM05D005237 ORTHO05D006189 3.7e-62 241.9 182 68.7
AUR62011203 Chenopodium quinoa HOM05D005237 ORTHO05D006189 1.8e-61 239.6 130 87.7
AUR62013284 Chenopodium quinoa HOM05D005237 ORTHO05D006189 1.8e-61 239.6 130 87.7
Zm00001eb238980 Zea mays HOM05D005237 ORTHO05D006189 2.4e-61 239.2 133 87.2
COL.COLO4_15552 Corchorus olitorius HOM05D005237 ORTHO05D006189 5.3e-61 238.0 126 91.3
TAR626G0602 Trochodendron aralioides HOM05D005237 ORTHO05D006189 1.6e-60 236.5 134 85.8
Thecc.09G135400 Theobroma cacao HOM05D005237 ORTHO05D006189 7.7e-60 234.2 172 70.3
CAN.G1382.4 Capsicum annuum HOM05D005237 ORTHO05D006189 1.0e-59 233.8 127 88.2
TPR.G39824 Trifolium pratense HOM05D005237 ORTHO05D006189 5.0e-59 231.5 127 85.8
Duzib187G1805 Durio zibethinus HOM05D005237 ORTHO05D006189 1.5e-58 229.9 130 85.4
Lsat_1_v5_gn_7_44340 Lactuca sativa HOM05D005237 ORTHO05D006189 1.2e-57 226.9 176 62.5
Os02g0235000 Oryza sativa ssp. japonica HOM05D005237 ORTHO05D006189 1.2e-57 226.9 127 85.0
TWI38G2392 Tripterygium wilfordii HOM05D005237 ORTHO05D006189 1.2e-57 226.9 128 85.2
MD10G1159100 Malus domestica HOM05D005237 ORTHO05D006189 6.8e-56 221.1 129 82.9
FAN25G0883 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.3e-54 216.9 163 70.6
VMungo0251G3112 Vigna mungo HOM05D005237 ORTHO05D006189 1.3e-51 206.8 147 74.1
Sopen02g003910 Solanum pennellii HOM05D005237 ORTHO05D006189 5.0e-51 204.9 132 75.0
Peaxi162Scf00113g00061 Petunia axillaris HOM05D005237 ORTHO05D006189 2.7e-49 199.1 128 77.3
Solyc02g014540.3 Solanum lycopersicum HOM05D005237 ORTHO05D006189 3.6e-49 198.7 130 73.1
Ca_21648_v3 Cicer arietinum L. HOM05D005237 ORTHO05D006189 1.9e-42 176.4 131 71.0
Sabra06G0046100 Salix brachista HOM05D005237 ORTHO05D006189 9.8e-39 164.1 96 83.3
FAN16G0279 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.3e-38 163.7 92 87.0
FAN21G3302 Fragaria x ananassa HOM05D005237 ORTHO05D006189 4.1e-37 158.7 89 88.8
PGSC0003DMG400003270 Solanum tuberosum HOM05D005237 ORTHO05D006189 2.7e-36 156.0 93 78.5
FAN17G0595 Fragaria x ananassa HOM05D005237 ORTHO05D006189 3.9e-35 152.1 95 82.1
FAN28G2985 Fragaria x ananassa HOM05D005237 ORTHO05D006189 5.0e-35 151.8 92 82.6
FAN02G0796 Fragaria x ananassa HOM05D005237 ORTHO05D006189 8.6e-35 151.0 103 74.8
FAN17G0540 Fragaria x ananassa HOM05D005237 ORTHO05D006189 1.9e-34 149.8 90 84.4
Eucgr.I02126 Eucalyptus grandis HOM05D005237 ORTHO05D006189 2.5e-34 149.4 80 86.2
FAN20G0460 Fragaria x ananassa HOM05D005237 ORTHO05D006189 2.5e-34 149.4 95 77.9
Medtr0320s0040 Medicago truncatula HOM05D005237 ORTHO05D006189 2.3e-32 142.9 88 78.4
Duzib168G1377 Durio zibethinus HOM05D005237 ORTHO05D006189 4.9e-30 135.2 75 88.0
Aa31LG9G5450 Aethionema arabicum HOM05D005237 ORTHO05D006189 2.0e-28 129.8 99 65.7
Eucgr.L01822 Eucalyptus grandis HOM05D005237 ORTHO05D006189 3.5e-28 129.0 80 78.8
FAN20G1904 Fragaria x ananassa HOM05D005237 ORTHO05D006189 6.0e-28 128.3 77 83.1
Cre09.g397950 Chlamydomonas reinhardtii HOM05D005237 ORTHO05D006189 1.6e-25 120.2 192 35.4
Zm00001eb302220 Zea mays HOM05D005237 ORTHO05D006189 8.1e-25 117.9 67 77.6
TAR625G1190 Trochodendron aralioides HOM05D005237 ORTHO05D006189 1.2e-20 104.0 90 61.1
Cc06_g07800 Coffea canephora HOM05D005237 ORTHO05D006189 6.6e-19 98.2 57 80.7
Lsat_1_v5_gn_2_45981 Lactuca sativa HOM05D005237 ORTHO05D003224 1.0e-11 74.3 39 79.5


User provided reference genes

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