Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 3.6e-219 764.6 388 100.0
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 3.9e-173 611.7 393 78.9
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 2.0e-169 599.4 388 77.8
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.4e-162 576.6 420 70.5
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 6.5e-160 567.8 379 77.0
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 3.2e-159 565.5 395 73.4
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 3.6e-158 562.0 357 78.4
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 4.7e-158 561.6 382 73.3
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 1.8e-157 559.7 335 81.5
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.5e-156 556.6 375 72.8
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.0e-156 556.2 401 71.3
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 3.3e-156 555.4 380 72.1
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 4.4e-156 555.1 376 74.2
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 5.7e-156 554.7 401 71.3
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 9.7e-156 553.9 326 82.8
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 1.3e-155 553.5 377 74.0
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 2.2e-155 552.7 384 73.4
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 2.8e-155 552.4 379 74.7
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 3.7e-155 552.0 332 80.7
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 4.8e-155 551.6 354 76.8
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 6.3e-155 551.2 379 71.8
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 3.1e-154 548.9 329 80.5
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 2.0e-153 546.2 318 81.1
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 2.7e-153 545.8 355 75.5
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 2.7e-153 545.8 370 73.5
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 2.7e-153 545.8 343 77.8
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 3.5e-153 545.4 352 76.1
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 5.9e-153 544.7 325 81.2
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 5.9e-153 544.7 372 74.2
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 5.9e-153 544.7 348 77.0
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 7.7e-153 544.3 355 75.8
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 1.0e-152 543.9 390 69.0
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 1.3e-152 543.5 390 71.0
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.3e-152 543.5 327 80.7
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 1.3e-152 543.5 372 73.1
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 1.3e-152 543.5 327 81.0
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 6.5e-152 541.2 362 73.8
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 1.1e-151 540.4 365 73.2
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 1.1e-151 540.4 360 75.8
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 3.2e-151 538.9 318 81.8
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 3.2e-151 538.9 381 71.7
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 4.2e-151 538.5 377 72.4
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 4.2e-151 538.5 319 81.2
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 7.2e-151 537.7 352 74.4
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 7.2e-151 537.7 375 71.5
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 9.4e-151 537.3 358 74.0
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.2e-150 537.0 325 80.3
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.6e-150 536.6 358 74.0
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.1e-150 536.2 356 75.0
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 2.1e-150 536.2 395 70.1
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 2.7e-150 535.8 318 79.9
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 4.7e-150 535.0 394 70.1
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 6.1e-150 534.6 358 74.0
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 1.8e-149 533.1 388 69.6
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 3.0e-149 532.3 325 80.0
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 5.2e-149 531.6 325 79.7
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 8.8e-149 530.8 386 69.7
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 1.5e-148 530.0 329 78.7
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 1.5e-148 530.0 373 70.5
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 1.5e-148 530.0 344 75.6
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 3.4e-148 528.9 322 79.8
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 3.4e-148 528.9 322 79.8
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 3.4e-148 528.9 322 79.8
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 3.4e-148 528.9 318 80.8
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 3.4e-148 528.9 330 78.2
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 9.8e-148 527.3 325 78.8
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 2.2e-147 526.2 316 79.4
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 2.2e-147 526.2 394 69.0
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 1.8e-146 523.1 365 72.6
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 3.1e-146 522.3 318 79.6
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 7.0e-146 521.2 335 76.4
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 2.0e-145 519.6 359 70.5
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.0e-144 517.3 393 69.0
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 1.3e-144 516.9 374 70.6
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 1.7e-144 516.5 318 78.9
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 3.3e-143 512.3 328 77.7
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 3.6e-142 508.8 355 73.0
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 4.7e-142 508.4 380 66.1
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 1.4e-141 506.9 317 76.3
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 1.2e-140 503.8 372 68.3
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 2.2e-139 499.6 337 74.2
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 2.8e-139 499.2 354 70.9
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 5.9e-137 491.5 280 83.9
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 4.3e-135 485.3 276 83.7
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 2.1e-134 483.0 373 67.3
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.8e-126 456.1 272 79.8
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 6.2e-126 454.9 268 81.7
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 6.8e-125 451.4 334 70.4
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 6.8e-125 451.4 267 80.9
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 1.3e-120 437.2 259 82.6
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 6.2e-118 428.3 297 73.1
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 1.7e-115 420.2 341 59.8
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 3.7e-115 419.1 268 75.4
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 1.0e-112 411.0 337 59.1
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 1.3e-112 410.6 329 62.0
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 9.5e-111 404.4 326 60.1
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.9e-103 380.2 272 69.9
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 3.6e-102 375.9 290 67.6
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 3.6e-102 375.9 292 65.8
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 2.4e-101 373.2 267 69.7
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 5.1e-96 355.5 224 77.2
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 1.5e-92 344.0 232 72.0
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.5e-79 300.8 269 63.2
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-72 278.1 273 56.0
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 1.0e-72 278.1 336 43.5
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 1.0e-72 278.1 336 43.5
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.5e-71 273.5 186 71.0
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 2.4e-69 266.9 330 42.7
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 1.2e-68 264.6 313 45.4
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 5.9e-68 262.3 155 81.3
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 2.3e-64 250.4 166 77.1
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 3.3e-63 246.5 165 72.1
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 8.5e-59 231.9 130 84.6
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 7.0e-37 159.1 407 31.4
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 3.8e-35 153.3 91 79.1
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 5.5e-34 149.4 100 69.0
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 6.3e-30 136.0 85 70.6
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 1.1e-29 135.2 79 82.3
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.9e-26 124.4 90 66.7
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 7.0e-21 105.9 90 57.8
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 2.3e-19 100.9 105 52.4
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 5.6e-18 96.3 74 67.6
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 1.5e-15 88.2 54 75.9
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 3.4e-15 87.0 58 69.0
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 1.3e-14 85.1 58 75.9
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 4.9e-14 83.2 47 85.1
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 4.9e-14 83.2 75 60.0
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 4.9e-14 83.2 75 60.0
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 1.6e-12 78.2 51 74.5
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 2.3e-11 74.3 297 26.3
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 2.3e-11 74.3 43 83.7
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.9e-10 71.2 95 46.3
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 4.3e-10 70.1 139 36.0
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 7.3e-10 69.3 285 24.6
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 1.6e-09 68.2 111 40.5
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 2.1e-09 67.8 284 25.4
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.1e-09 67.8 290 26.6
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 4.7e-09 66.6 284 25.7
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 6.2e-09 66.2 42 76.2
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 6.2e-09 66.2 285 26.0
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 6.2e-09 66.2 280 26.4
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 6.2e-09 66.2 292 26.7
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 8.1e-09 65.9 291 26.1
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 1.4e-08 65.1 303 25.1
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 1.4e-08 65.1 47 63.8
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 1.4e-08 65.1 75 49.3
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.4e-08 65.1 277 26.4
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 1.8e-08 64.7 282 25.2
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 1.8e-08 64.7 303 24.8
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.8e-08 64.7 283 24.0
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 2.3e-08 64.3 328 25.6
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 2.3e-08 64.3 315 24.8
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 3.1e-08 63.9 360 26.1
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 4.0e-08 63.5 278 26.3
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 5.2e-08 63.2 279 25.1
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.2e-08 63.2 298 26.5
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 5.2e-08 63.2 280 25.0
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 6.8e-08 62.8 290 25.9
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 8.9e-08 62.4 283 25.4
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 8.9e-08 62.4 298 25.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 8.9e-08 62.4 298 25.8
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 8.9e-08 62.4 323 24.5
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 8.9e-08 62.4 296 24.7
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.2e-07 62.0 298 25.8
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.2e-07 62.0 308 27.6
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 1.5e-07 61.6 344 24.4
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.5e-07 61.6 325 24.3
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 1.5e-07 61.6 279 26.2
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 2.2e-06 57.8 290 24.5
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 2.2e-06 57.8 33 75.8
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 2.9e-06 57.4 285 25.3
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 2.9e-06 57.4 280 24.3


User provided reference genes

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