Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.5e-188 662.9 399 100.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 9.4e-162 573.9 400 90.8
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 4.2e-154 548.5 401 77.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 9.4e-154 547.4 400 81.0
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.3e-152 542.7 406 86.5
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.1e-151 540.4 400 70.8
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 1.1e-151 540.4 400 70.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 1.5e-151 540.0 400 75.2
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 5.7e-151 538.1 386 84.7
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 7.4e-151 537.7 393 78.6
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 3.7e-150 535.4 388 84.3
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 6.3e-150 534.6 401 70.1
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 1.4e-149 533.5 406 79.3
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 2.4e-149 532.7 411 81.5
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 4.1e-149 531.9 403 81.9
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 4.1e-149 531.9 404 71.0
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 4.1e-149 531.9 405 81.5
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.5e-148 530.0 402 79.1
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 3.5e-148 528.9 405 78.0
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 5.9e-148 528.1 407 79.9
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 5.9e-148 528.1 391 83.1
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 5.0e-147 525.0 402 70.6
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 8.5e-147 524.2 406 80.0
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 1.1e-146 523.9 413 82.1
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.5e-146 523.5 395 85.1
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 4.2e-146 521.9 396 73.0
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 5.5e-146 521.5 408 82.4
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.6e-145 520.0 407 75.7
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 2.7e-145 519.2 396 85.1
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 1.0e-144 517.3 405 81.0
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.4e-144 516.9 380 83.9
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 2.3e-144 516.2 395 77.7
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 3.9e-144 515.4 416 70.7
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.7e-144 514.6 399 79.9
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 8.8e-144 514.2 412 74.8
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 2.6e-143 512.7 420 79.3
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 7.4e-143 511.1 402 76.6
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 2.2e-142 509.6 421 75.3
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 4.1e-141 505.4 413 70.0
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 7.0e-141 504.6 419 78.5
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.5e-140 501.9 401 73.6
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.7e-139 500.0 414 76.8
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.2e-138 495.7 395 78.5
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.7e-137 491.9 417 75.3
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 6.1e-137 491.5 401 67.8
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 8.0e-137 491.1 416 71.4
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 1.0e-136 490.7 414 78.7
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.4e-136 490.3 419 62.3
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.0e-135 486.5 435 59.8
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 5.7e-135 485.0 407 66.8
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-134 483.8 411 74.2
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.8e-134 482.6 407 74.4
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.4e-133 480.3 415 73.5
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.1e-133 478.8 416 72.8
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 1.6e-132 476.9 405 74.8
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.6e-132 476.9 417 75.3
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-132 475.3 414 72.9
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 4.5e-132 475.3 417 77.5
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 5.9e-132 474.9 397 71.0
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.7e-131 473.4 405 75.3
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 5.0e-131 471.9 395 64.3
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 6.1e-129 464.9 407 73.2
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.8e-128 463.4 375 77.6
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 4.0e-128 462.2 372 80.1
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.2e-127 460.7 427 64.6
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.5e-127 460.3 394 61.4
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 1.5e-127 460.3 401 69.3
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 9.8e-127 457.6 428 70.1
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.3e-126 457.2 409 67.2
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.3e-126 457.2 394 60.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.8e-125 453.4 405 74.6
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 5.4e-125 451.8 385 71.4
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 2.0e-124 449.9 402 64.7
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 2.7e-124 449.5 411 65.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.0e-123 447.6 406 71.7
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 1.0e-123 447.6 406 71.7
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.0e-123 447.6 406 71.7
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.7e-123 446.8 406 65.0
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.9e-123 446.0 408 66.9
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.9e-123 446.0 399 69.7
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 3.8e-123 445.7 408 66.2
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.6e-123 444.5 406 66.7
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-122 444.1 406 64.0
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.1e-122 444.1 406 64.0
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 1.9e-122 443.4 348 67.2
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.9e-122 443.4 379 77.0
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 4.2e-122 442.2 409 63.1
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 4.2e-122 442.2 409 63.1
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 5.6e-122 441.8 410 71.0
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 5.6e-122 441.8 410 71.0
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.2e-121 440.7 408 72.8
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.2e-121 440.7 389 65.6
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 2.8e-121 439.5 409 64.3
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.3e-120 436.4 335 70.1
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.0e-119 433.3 306 77.8
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 2.2e-118 429.9 474 59.3
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.4e-117 427.2 294 86.1
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.0e-116 423.3 392 64.5
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 7.8e-116 421.4 363 62.0
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 1.3e-115 420.6 397 65.2
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.2e-113 414.1 345 72.8
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 8.9e-112 407.9 338 73.7
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 7.5e-111 404.8 401 61.1
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.3e-110 404.1 364 65.4
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 1.3e-110 404.1 407 67.8
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 6.4e-110 401.7 388 60.8
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 1.9e-109 400.2 394 66.5
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.9e-109 400.2 394 65.7
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.4e-109 399.8 405 67.4
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 3.5e-108 396.0 383 59.8
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 1.9e-106 390.2 402 61.7
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.2e-105 387.5 396 60.9
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.0e-104 382.5 420 61.0
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 4.0e-104 382.5 346 57.5
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.3e-96 356.7 397 55.2
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.3e-94 350.9 382 53.1
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 1.9e-93 347.1 394 65.0
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.7e-92 343.2 443 48.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.9e-90 337.0 366 52.5
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 4.0e-88 329.3 375 56.3
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.4e-85 320.1 167 86.8
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.4e-85 320.1 343 48.7
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 1.2e-84 317.8 329 50.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.9e-83 312.8 181 81.8
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 3.4e-79 299.7 363 57.3
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 7.6e-79 298.5 334 47.9
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 2.3e-75 287.0 314 49.0
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 1.8e-72 277.3 291 71.5
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 5.8e-71 272.3 285 71.9
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 1.9e-69 267.3 290 70.7
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 9.6e-66 255.0 141 83.7
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 2.5e-61 240.4 124 85.5
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 2.1e-60 237.3 277 53.8
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.5e-54 215.7 153 76.5
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 3.5e-52 209.9 111 84.7
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 2.2e-46 190.7 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.0e-46 189.5 172 56.4
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 7.9e-44 182.2 333 35.7
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.8e-41 173.7 92 84.8
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-37 160.6 153 60.1
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 2.9e-30 137.1 259 33.2
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.1e-26 125.2 100 68.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.0e-14 85.5 83 47.0
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 5.5e-13 79.7 37 94.6
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 1.7e-09 68.2 71 49.3
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 3.7e-09 67.0 58 58.6


User provided reference genes

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