Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold379G50347 Striga asiatica HOM05D008299 ORTHO05D010400 3.4e-109 398.3 190 100.0
CAN.G343.2 Capsicum annuum HOM05D000445 ORTHO05D010400 1.0e-28 131.0 145 49.0
CAN.G219.11 Capsicum annuum HOM05D000445 ORTHO05D010400 9.3e-27 124.4 145 46.9
CSS0008439 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 5.1e-25 118.6 66 81.8
CSS0021182 Camellia sinensis var. sinensis HOM05D008299 ORTHO05D010400 5.1e-25 118.6 66 81.8
CAN.G100.36 Capsicum annuum HOM05D008299 ORTHO05D010400 1.3e-23 114.0 65 78.5
CAN.G1298.15 Capsicum annuum HOM05D008299 ORTHO05D010400 1.3e-23 114.0 65 78.5
CAN.G1648.16 Capsicum annuum HOM05D008299 ORTHO05D010400 3.1e-22 109.4 65 75.4
CAN.G719.1 Capsicum annuum HOM05D008299 ORTHO05D010400 4.1e-22 109.0 65 75.4
CAN.G129.17 Capsicum annuum HOM05D008299 ORTHO05D010400 1.2e-21 107.5 65 73.8
Solyc01g017080.2 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.5e-21 107.1 127 45.7
Solyc11g021080.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.4e-19 100.5 65 70.8
Solyc02g011920.2 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-19 100.1 65 70.8
Solyc11g018700.3 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.7e-15 87.0 49 77.6
Migut.L00537 Erythranthe guttata HOM05D008299 ORTHO05D010400 8.2e-15 84.7 50 76.0
Solyc00g500038.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500045.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500082.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500127.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500197.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500300.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Solyc00g500326.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 9.1e-14 81.3 47 74.5
Potri.019G028450 Populus trichocarpa HOM05D008299 ORTHO05D010400 1.5e-13 80.5 68 60.3
Solyc01g017150.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 1.0e-12 77.8 49 65.3
ATCG00870 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
ATCG01270 Arabidopsis thaliana HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
BraSC48t46294Z Brassica rapa HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
BraSC48t46311Z Brassica rapa HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
BraSC48t46344Z Brassica rapa HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
CARHR282310 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
CARHR282550 Cardamine hirsuta HOM05D008299 ORTHO05D010400 5.5e-11 72.0 60 60.0
Thhalv10003089m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 7.2e-11 71.6 60 60.0
Thhalv10012154m.g Eutrema salsugineum HOM05D008299 ORTHO05D010400 1.6e-10 70.5 60 58.3
BraSC54t46357Z Brassica rapa HOM05D008299 ORTHO05D010400 2.1e-10 70.1 42 73.8
Gohir.1Z050502 Gossypium hirsutum HOM05D008299 ORTHO05D010400 2.1e-10 70.1 42 73.8
Gohir.D02G117444 Gossypium hirsutum HOM05D008299 ORTHO05D010400 2.1e-10 70.1 42 73.8
Solyc03g058240.1 Solanum lycopersicum HOM05D008299 ORTHO05D010400 6.1e-10 68.6 49 63.3
C06p23160 Brassica napus HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
C09p24750 Brassica napus HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BolSC29t60493H Brassica oleracea HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BolSC37t60783H Brassica oleracea HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BolSC44t60837H Brassica oleracea HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BolSC45t60893H Brassica oleracea HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BolSC49t61213H Brassica oleracea HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BraSC103t45416Z Brassica rapa HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BraSC103t45438Z Brassica rapa HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BraSC143t45671Z Brassica rapa HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BraSC25t45895Z Brassica rapa HOM05D008299 ORTHO05D010400 1.4e-09 67.4 60 56.7
BraSC138t45545Z Brassica rapa HOM05D008299 ORTHO05D010400 3.9e-09 65.9 46 69.6
BraSC58t46447Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-09 65.5 42 69.0
BraSC59t46562Z Brassica rapa HOM05D008299 ORTHO05D010400 5.1e-09 65.5 42 69.0
BolC2t08923H Brassica oleracea HOM05D008299 ORTHO05D010400 8.8e-09 64.7 48 60.4
BolSC29t60562H Brassica oleracea HOM05D008299 ORTHO05D010400 8.8e-09 64.7 43 65.1
CAN.G1178.2 Capsicum annuum HOM05D008299 ORTHO05D010400 8.8e-09 64.7 34 79.4
Sopen06g013430 Solanum pennellii HOM05D000963 ORTHO05D026832 8.8e-09 64.7 36 86.1
AL2G21830 Arabidopsis lyrata HOM05D000963 ORTHO05D026832 1.1e-08 64.3 36 83.3
Solyc00g500039.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-08 64.3 36 86.1
Solyc00g500044.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-08 64.3 36 86.1
Solyc00g500083.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-08 64.3 36 86.1
Solyc00g500301.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-08 64.3 36 86.1
Solyc00g500325.1 Solanum lycopersicum HOM05D000963 ORTHO05D005131 1.1e-08 64.3 36 86.1
AL9U12040 Arabidopsis lyrata HOM05D008299 ORTHO05D010400 7.4e-08 61.6 55 56.4
arahy.Tifrunner.gnm1.ann1.ZJEP1E Arachis hypogaea HOM05D000963 ORTHO05D011791 1.7e-07 60.5 38 78.9
Gohir.D01G101865 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.2e-07 60.1 104 38.5
arahy.Tifrunner.gnm1.ann1.A049RL Arachis hypogaea HOM05D000963 ORTHO05D005131 2.8e-07 59.7 36 80.6
RcHm_v2.0_Chr5g0051131 Rosa chinensis HOM05D008299 ORTHO05D010400 4.8e-07 58.9 34 73.5
RcHm_v2.0_CPg0501791 Rosa chinensis HOM05D008299 ORTHO05D010400 4.8e-07 58.9 34 73.5
RcHm_v2.0_CPg0502621 Rosa chinensis HOM05D008299 ORTHO05D010400 4.8e-07 58.9 34 73.5
EL10Ac1g01995 Beta vulgaris HOM05D000411 ORTHO05D000310 6.3e-07 58.5 36 77.8
Phvul.003G113100 Phaseolus vulgaris HOM05D000963 ORTHO05D026832 1.1e-06 57.8 81 43.2
Sopen06g013420 Solanum pennellii HOM05D000963 ORTHO05D026832 1.8e-06 57.0 36 75.0


User provided reference genes

Program Settings