Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold378G50330 Striga asiatica HOM05D007292 ORTHO05D009084 8.7e-219 763.5 415 100.0
SalBow5G4600 Salvia bowleyana HOM05D007292 ORTHO05D009084 8.8e-30 135.6 189 46.6
SalBow5G0252 Salvia bowleyana HOM05D007292 ORTHO05D009084 5.7e-29 132.9 188 46.3
Nitab4.5_0002701g0020 Nicotiana tabacum HOM05D007292 ORTHO05D009084 7.0e-27 125.9 191 45.0
Peaxi162Scf00484g00003 Petunia axillaris HOM05D007292 ORTHO05D009084 9.2e-27 125.6 202 43.1
QL08p063404 Quercus lobata HOM05D007292 ORTHO05D009084 1.2e-26 125.2 178 46.1
Nitab4.5_0000487g0050 Nicotiana tabacum HOM05D007292 ORTHO05D009084 2.7e-26 124.0 191 44.0
Cfa001300 Carpinus fangiana HOM05D007292 ORTHO05D009084 4.5e-26 123.2 207 41.5
Manes.07G131600 Manihot esculenta HOM05D007292 ORTHO05D009084 4.5e-26 123.2 190 44.2
Haze_17244 Corylus avellana HOM05D004762 ORTHO05D005972 5.9e-26 122.9 219 39.7
CiPaw.01G300300 Carya illinoinensis HOM05D007292 ORTHO05D009084 7.8e-26 122.5 200 42.0
Nn2g13181 Nelumbo nucifera HOM05D007292 ORTHO05D009084 1.0e-25 122.1 159 46.5
Migut.F01485 Erythranthe guttata HOM05D007292 ORTHO05D009084 1.3e-25 121.7 192 42.2
ClCG07G004350 Citrullus lanatus HOM05D007292 ORTHO05D009084 5.0e-25 119.8 161 49.1
Eucgr.J00191 Eucalyptus grandis HOM05D007292 ORTHO05D009084 6.6e-25 119.4 167 45.5
Hund13879 Selenicereus undatus HOM05D007292 ORTHO05D009084 6.6e-25 119.4 213 40.8
Actinidia00958 Actinidia chinensis HOM05D007292 ORTHO05D009084 1.1e-24 118.6 192 43.8
Solyc03g095990.1 Solanum lycopersicum HOM05D007292 ORTHO05D009084 1.1e-24 118.6 207 41.1
PGSC0003DMG400027726 Solanum tuberosum HOM05D007292 ORTHO05D009084 1.5e-24 118.2 199 41.7
MELO3C018364.2 Cucumis melo HOM05D007292 ORTHO05D009084 1.9e-24 117.9 280 34.3
Thecc.10G013900 Theobroma cacao HOM05D007292 ORTHO05D009084 1.9e-24 117.9 142 50.0
CsaV3_5G010290 Cucumis sativus L. HOM05D007292 ORTHO05D009084 2.5e-24 117.5 271 33.2
Duzib114G0074 Durio zibethinus HOM05D007292 ORTHO05D009084 2.5e-24 117.5 169 45.6
CSS0010989 Camellia sinensis var. sinensis HOM05D007292 ORTHO05D009084 3.3e-24 117.1 200 41.0
TWI09G0172 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 3.3e-24 117.1 142 50.7
Potri.008G070700 Populus trichocarpa HOM05D007292 ORTHO05D009084 4.3e-24 116.7 116 54.3
Sopen03g026090 Solanum pennellii HOM05D007292 ORTHO05D009084 4.3e-24 116.7 207 40.6
Sabra10G0144000 Salix brachista HOM05D007292 ORTHO05D009084 5.6e-24 116.3 80 68.8
TAR633G2478 Trochodendron aralioides HOM05D007292 ORTHO05D009084 7.3e-24 115.9 122 52.5
Potri.010G186800 Populus trichocarpa HOM05D007292 ORTHO05D009084 9.5e-24 115.5 163 45.4
GSVIVG01032790001 Vitis vinifera HOM05D007292 ORTHO05D009084 2.1e-23 114.4 221 40.7
Atru.chr12.94 Acer truncatum HOM05D007292 ORTHO05D009084 4.7e-23 113.2 185 41.6
Actinidia13950 Actinidia chinensis HOM05D007292 ORTHO05D009084 6.1e-23 112.8 185 44.3
Lalb_Chr08g0231651 Lupinus albus HOM05D007292 ORTHO05D009084 6.1e-23 112.8 203 40.4
Cpa.g.sc19.157 Carica papaya HOM05D007292 ORTHO05D009084 8.0e-23 112.5 123 52.0
Dinv10605 Davidia involucrata HOM05D007292 ORTHO05D009084 8.0e-23 112.5 194 40.2
Sc10g0002470 Simmondsia chinensis HOM05D007292 ORTHO05D009084 1.4e-22 111.7 125 49.6
Gohir.A05G330800 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.8e-22 111.3 142 47.9
Medtr3g070960 Medicago truncatula HOM05D007292 ORTHO05D009084 1.8e-22 111.3 204 35.3
PSO384G0417 Papaver somniferum HOM05D007292 ORTHO05D009084 2.3e-22 110.9 174 43.1
Cc08_g07220 Coffea canephora HOM05D007292 ORTHO05D009084 3.0e-22 110.5 210 38.1
arahy.Tifrunner.gnm1.ann1.W7USAB Arachis hypogaea HOM05D007292 ORTHO05D009084 4.0e-22 110.2 243 36.6
EL10Ac2g04856 Beta vulgaris HOM05D007292 ORTHO05D009084 4.0e-22 110.2 194 38.1
Glyma.18G025900 Glycine max HOM05D007292 ORTHO05D009084 6.8e-22 109.4 215 40.5
PGR044G1044 Punica granatum HOM05D007292 ORTHO05D009084 6.8e-22 109.4 187 39.0
Sed0024586 Sechium edule HOM05D007292 ORTHO05D009084 6.8e-22 109.4 196 39.3
arahy.Tifrunner.gnm1.ann1.RI3S0A Arachis hypogaea HOM05D007292 ORTHO05D009084 8.9e-22 109.0 243 36.6
BraA04t16126Z Brassica rapa HOM05D007292 ORTHO05D009084 8.9e-22 109.0 129 48.8
BcaB01g00041 Brassica carinata HOM05D007292 ORTHO05D009084 1.2e-21 108.6 143 48.3
Ciclev10032544m.g Citrus clementina HOM05D007292 ORTHO05D009084 1.2e-21 108.6 167 42.5
ATR0681G254 Amborella trichopoda HOM05D007292 ORTHO05D009084 1.5e-21 108.2 194 41.2
Gohir.D04G069400 Gossypium hirsutum HOM05D007292 ORTHO05D009084 1.5e-21 108.2 185 41.1
Sabra08G0052000 Salix brachista HOM05D007292 ORTHO05D009084 1.5e-21 108.2 116 50.9
Gorai.012G078000 Gossypium raimondii HOM05D007292 ORTHO05D009084 2.0e-21 107.8 185 41.1
Prupe.2G252500 Prunus persica HOM05D007292 ORTHO05D009084 2.6e-21 107.5 217 39.6
vmacro10031 Vaccinium macrocarpon HOM05D007292 ORTHO05D009084 3.4e-21 107.1 188 40.4
AUR62022909 Chenopodium quinoa HOM05D007292 ORTHO05D009084 4.4e-21 106.7 233 34.3
Sp5g06520 Schrenkiella parvula HOM05D007292 ORTHO05D009084 4.4e-21 106.7 90 61.1
C04p36460 Brassica napus HOM05D007292 ORTHO05D009084 7.5e-21 105.9 115 52.2
BolC4t25149H Brassica oleracea HOM05D007292 ORTHO05D009084 7.5e-21 105.9 115 52.2
MD07G1224000 Malus domestica HOM05D007292 ORTHO05D009084 7.5e-21 105.9 113 52.2
TWI53G0916 Tripterygium wilfordii HOM05D007292 ORTHO05D009084 7.5e-21 105.9 175 39.4
Lsat_1_v5_gn_2_124081 Lactuca sativa HOM05D007292 ORTHO05D009084 9.8e-21 105.5 182 41.2
Aa31LG10G10950 Aethionema arabicum HOM05D007292 ORTHO05D009084 1.3e-20 105.1 124 50.0
CARHR166090 Cardamine hirsuta HOM05D007292 ORTHO05D009084 1.3e-20 105.1 121 48.8
Thhalv10006239m.g Eutrema salsugineum HOM05D007292 ORTHO05D009084 1.3e-20 105.1 148 43.9
AT3G56010 Arabidopsis thaliana HOM05D007292 ORTHO05D009084 1.7e-20 104.8 139 46.8
COL.COLO4_25767 Corchorus olitorius HOM05D004762 ORTHO05D005972 1.7e-20 104.8 184 40.2
MD01G1154900 Malus domestica HOM05D007292 ORTHO05D009084 1.7e-20 104.8 180 40.6
Ah.16g103670 Amaranthus hybridus HOM05D007292 ORTHO05D009084 2.2e-20 104.4 194 39.2
Aqoxy6G01833 Aquilegia oxysepala HOM05D007292 ORTHO05D009084 2.2e-20 104.4 152 46.1
BcaC02g09799 Brassica carinata HOM05D007292 ORTHO05D009084 2.2e-20 104.4 115 51.3
A09p48960 Brassica napus HOM05D007292 ORTHO05D009084 2.9e-20 104.0 80 66.2
C08p31330 Brassica napus HOM05D007292 ORTHO05D009084 2.9e-20 104.0 80 66.2
BolC8t50754H Brassica oleracea HOM05D007292 ORTHO05D009084 2.9e-20 104.0 80 66.2
BraA09t40351Z Brassica rapa HOM05D007292 ORTHO05D009084 2.9e-20 104.0 80 66.2
Glyma.11G231200 Glycine max HOM05D007292 ORTHO05D009084 2.9e-20 104.0 184 41.3
AL5G37290 Arabidopsis lyrata HOM05D007292 ORTHO05D009084 8.3e-20 102.4 148 43.2
Zm00001eb013500 Zea mays HOM05D007292 ORTHO05D009084 8.3e-20 102.4 172 41.3
Rhsim09G0178500 Rhododendron simsii HOM05D007292 ORTHO05D009084 1.1e-19 102.1 188 39.9
A04p04080 Brassica napus HOM05D007292 ORTHO05D009084 1.8e-19 101.3 106 53.8
HanXRQChr14g0459531 Helianthus annuus HOM05D007292 ORTHO05D009084 2.4e-19 100.9 119 50.4
Lj6g0005846 Lotus japonicus HOM05D007292 ORTHO05D009084 4.1e-19 100.1 259 35.1
THA.LOC104824327 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 4.1e-19 100.1 116 52.6
Carub.0005s2275 Capsella rubella HOM05D007292 ORTHO05D009084 5.4e-19 99.8 115 49.6
THA.LOC104811239 Tarenaya hassleriana HOM05D007292 ORTHO05D009084 1.6e-18 98.2 134 46.3
RcHm_v2.0_Chr1g0370551 Rosa chinensis HOM05D007292 ORTHO05D009084 2.7e-18 97.4 116 50.0
CANSAT56G1912 Cannabis sativa HOM05D007292 ORTHO05D009084 3.5e-18 97.1 179 40.8
ECA238G0254 Erigeron canadensis HOM05D007292 ORTHO05D009084 3.5e-18 97.1 139 46.0
Hma1.2p1_0145F.1_g065370 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.3e-17 95.1 107 50.5
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla HOM05D001399 ORTHO05D001670 1.3e-17 95.1 132 47.0
Hma1.2p1_2705F.1_g327175 Hydrangea macrophylla HOM05D007292 ORTHO05D009084 1.3e-17 95.1 107 50.5
FAN01G0766 Fragaria x ananassa HOM05D007292 ORTHO05D009084 2.3e-17 94.4 184 39.7
VMungo1383G3483 Vigna mungo HOM05D001399 ORTHO05D001670 3.0e-17 94.0 212 41.0
Os03g0293100 Oryza sativa ssp. japonica HOM05D007292 ORTHO05D009084 5.0e-17 93.2 136 45.6
FvH4_7g24710 Fragaria vesca HOM05D007292 ORTHO05D009084 1.5e-16 91.7 189 38.6
FAN03G0495 Fragaria x ananassa HOM05D004762 ORTHO05D005972 1.5e-16 91.7 189 38.6
FAN06G1000 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.5e-16 91.7 189 38.6
TPR.G11203 Trifolium pratense HOM05D007292 ORTHO05D009084 1.5e-16 91.7 206 34.0
DCAR_011829 Daucus carota HOM05D007292 ORTHO05D009084 1.9e-16 91.3 124 47.6
FAN10G1098 Fragaria x ananassa HOM05D007292 ORTHO05D009084 1.9e-16 91.3 189 38.6
CDE04G1468 Ceratophyllum demersum HOM05D000652 ORTHO05D009084 4.3e-16 90.1 78 55.1
Phvul.001G244400 Phaseolus vulgaris HOM05D007292 ORTHO05D009084 7.3e-16 89.4 207 38.2
TAR636G1797 Trochodendron aralioides HOM05D007292 ORTHO05D009084 1.2e-15 88.6 159 39.6
Ca_15135_v3 Cicer arietinum L. HOM05D007292 ORTHO05D009084 2.3e-14 84.3 206 34.0
Psat5g129440 Pisum sativum HOM05D007292 ORTHO05D009084 4.0e-14 83.6 155 37.4
SEGI_20884 Sequoiadendron giganteum HOM05D007292 ORTHO05D009084 1.2e-10 72.0 198 29.3
BcaB02g08388 Brassica carinata HOM05D007292 ORTHO05D009084 3.3e-08 63.9 55 56.4
Lsat_1_v5_gn_7_113640 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-06 58.5 63 47.6


User provided reference genes

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