Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 7.9e-152 540.4 274 100.0
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 1.8e-26 124.0 68 91.2
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 4.3e-25 119.4 68 85.3
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 4.8e-24 115.9 69 82.6
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 8.2e-24 115.2 71 78.9
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.4e-23 114.4 69 79.7
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.8e-23 114.0 68 82.4
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 1.8e-23 114.0 68 82.4
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 1.8e-23 114.0 68 82.4
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.8e-23 114.0 68 82.4
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 1.8e-23 114.0 68 82.4
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.1e-23 113.2 69 78.3
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.1e-23 113.2 69 78.3
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 3.1e-23 113.2 68 80.9
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 5.3e-23 112.5 68 77.9
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 5.3e-23 112.5 71 76.1
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.3e-23 112.5 71 76.1
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 5.3e-23 112.5 69 76.8
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 5.3e-23 112.5 68 80.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 6.9e-23 112.1 71 76.1
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 6.9e-23 112.1 68 79.4
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 9.0e-23 111.7 71 76.1
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 9.0e-23 111.7 68 77.9
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.2e-22 111.3 68 79.4
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.5e-22 110.9 68 76.5
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 1.5e-22 110.9 68 77.9
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 79.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 77.9
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 79.4
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 79.4
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 79.4
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 2.0e-22 110.5 133 51.9
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 79.4
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 2.0e-22 110.5 68 77.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 2.6e-22 110.2 68 79.4
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 2.6e-22 110.2 69 78.3
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.6e-22 110.2 68 79.4
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.4e-22 109.8 68 77.9
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 3.4e-22 109.8 68 76.5
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 3.4e-22 109.8 68 76.5
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 5.9e-22 109.0 68 75.0
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 7.6e-22 108.6 68 77.9
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 7.6e-22 108.6 68 77.9
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 7.6e-22 108.6 68 77.9
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 7.6e-22 108.6 68 75.0
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 7.6e-22 108.6 68 75.0
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.0e-21 108.2 68 75.0
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 1.0e-21 108.2 69 73.9
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.0e-21 108.2 68 76.5
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 1.0e-21 108.2 69 73.9
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.3e-21 107.8 69 73.9
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.3e-21 107.8 132 52.3
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.3e-21 107.8 68 75.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 1.7e-21 107.5 69 73.9
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 1.7e-21 107.5 69 73.9
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 2.2e-21 107.1 68 73.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 2.2e-21 107.1 68 75.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 2.2e-21 107.1 67 74.6
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.2e-21 107.1 68 73.5
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 2.2e-21 107.1 68 76.5
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 2.9e-21 106.7 69 72.5
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 2.9e-21 106.7 69 72.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 3.8e-21 106.3 68 72.1
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 3.8e-21 106.3 68 72.1
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 3.8e-21 106.3 68 73.5
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 3.8e-21 106.3 68 73.5
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.8e-21 106.3 68 75.0
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 6.5e-21 105.5 68 73.5
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 6.5e-21 105.5 68 73.5
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 6.5e-21 105.5 67 76.1
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 8.5e-21 105.1 68 72.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 8.5e-21 105.1 68 72.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.1e-20 104.8 67 74.6
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.5e-20 103.6 129 50.4
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 3.2e-20 103.2 69 69.6
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.2e-20 103.2 69 69.6
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 3.2e-20 103.2 69 69.6
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 3.2e-20 103.2 69 69.6
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 3.2e-20 103.2 69 69.6
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 4.2e-20 102.8 69 69.6
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 4.2e-20 102.8 69 69.6
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 5.5e-20 102.4 69 69.6
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 5.5e-20 102.4 69 69.6
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 7.2e-20 102.1 69 69.6
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 9.3e-20 101.7 68 73.5
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.2e-19 101.3 68 70.6
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.6e-19 100.9 68 72.1
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.0e-18 98.2 68 70.6
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 1.0e-18 98.2 68 67.6
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 8.8e-18 95.1 116 52.6
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 3.3e-17 93.2 67 68.7
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 6.3e-16 89.0 56 75.0
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 6.3e-16 89.0 68 64.7
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 1.1e-15 88.2 69 63.8
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.1e-15 88.2 67 65.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.4e-15 87.8 50 80.0
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.4e-15 87.8 50 80.0
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.4e-15 87.8 64 67.2
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.2e-14 84.7 117 46.2
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 1.5e-14 84.3 133 45.9
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 1.3e-13 81.3 68 57.4
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 2.2e-13 80.5 46 78.3
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.9e-13 80.1 103 49.5
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 3.8e-13 79.7 70 52.9
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 6.5e-13 79.0 68 57.4
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 1.1e-12 78.2 44 79.5
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.4e-12 77.8 68 58.8
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.2e-12 76.3 48 72.9
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 5.5e-12 75.9 55 67.3
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 1.2e-11 74.7 44 79.5
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.7e-11 73.6 44 75.0
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.6e-11 73.2 67 52.2
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 2.0e-09 67.4 66 50.0
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 1.1e-07 61.6 61 52.5
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.1e-07 60.1 69 49.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.1e-07 60.1 41 70.7


User provided reference genes

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