Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 1.7e-191 672.5 348 100.0
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 8.2e-154 547.4 354 81.1
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 3.0e-148 528.9 349 80.5
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 5.0e-143 511.5 354 75.4
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 2.0e-139 499.6 381 71.1
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 4.8e-138 495.0 354 75.1
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 3.5e-136 488.8 351 73.5
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 5.9e-136 488.0 355 75.5
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 1.7e-135 486.5 351 73.5
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 1.9e-134 483.0 351 73.2
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 3.2e-134 482.3 351 72.9
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 4.2e-134 481.9 351 73.2
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 1.8e-132 476.5 350 73.4
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 3.0e-132 475.7 389 67.1
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 1.5e-131 473.4 347 72.9
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 4.4e-131 471.9 336 75.3
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 4.4e-131 471.9 353 72.8
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 4.4e-131 471.9 339 73.5
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 1.7e-130 469.9 343 72.9
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 2.2e-130 469.5 350 71.7
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 1.4e-129 466.8 339 71.7
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 4.1e-129 465.3 358 69.8
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 5.3e-129 464.9 347 71.5
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 5.3e-129 464.9 351 72.4
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 3.5e-128 462.2 346 72.3
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 4.5e-128 461.8 303 78.9
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 3.2e-126 455.7 362 69.1
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 3.2e-126 455.7 345 72.5
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 7.2e-126 454.5 347 70.6
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 1.6e-125 453.4 303 79.2
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 2.7e-125 452.6 308 77.6
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 6.1e-125 451.4 316 76.9
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 6.1e-125 451.4 310 77.7
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 8.0e-125 451.1 353 70.5
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 1.0e-124 450.7 352 70.2
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 1.0e-124 450.7 351 67.8
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 1.8e-124 449.9 353 70.8
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 3.0e-124 449.1 310 77.1
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 4.0e-124 448.7 353 70.5
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 4.0e-124 448.7 352 69.3
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 5.2e-124 448.4 301 77.4
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 8.8e-124 447.6 312 77.2
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 2.0e-123 446.4 359 68.2
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 3.4e-123 445.7 362 67.4
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 3.4e-123 445.7 312 76.6
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 4.4e-123 445.3 302 78.8
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 4.4e-123 445.3 347 68.9
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 4.4e-123 445.3 296 76.7
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 5.7e-123 444.9 350 67.7
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 5.7e-123 444.9 307 76.5
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 1.3e-122 443.7 350 69.1
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 1.7e-122 443.4 318 74.5
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 1.7e-122 443.4 307 76.2
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 2.2e-122 443.0 302 76.8
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 2.2e-122 443.0 330 73.6
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 2.2e-122 443.0 342 68.7
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 2.8e-122 442.6 350 70.0
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 2.8e-122 442.6 355 69.3
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 3.7e-122 442.2 308 74.7
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 4.8e-122 441.8 356 68.5
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 4.8e-122 441.8 346 70.5
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 6.3e-122 441.4 308 74.0
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 8.3e-122 441.0 320 72.8
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 8.3e-122 441.0 315 74.0
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 8.3e-122 441.0 315 74.0
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 8.3e-122 441.0 315 74.0
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 1.1e-121 440.7 307 76.5
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 1.1e-121 440.7 308 77.3
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 1.1e-121 440.7 351 70.1
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 1.8e-121 439.9 350 67.1
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 1.8e-121 439.9 307 76.2
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 1.8e-121 439.9 315 73.7
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 3.1e-121 439.1 308 76.3
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 3.1e-121 439.1 303 74.9
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 4.1e-121 438.7 349 67.3
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.6e-120 436.8 315 74.6
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 2.7e-120 436.0 315 73.7
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 2.7e-120 436.0 307 76.2
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 4.5e-120 435.3 302 74.8
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 4.5e-120 435.3 308 74.0
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 7.7e-120 434.5 280 80.7
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 1.3e-119 433.7 310 73.9
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 1.3e-119 433.7 307 74.9
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 1.3e-119 433.7 303 74.3
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 1.7e-119 433.3 348 68.7
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 1.7e-119 433.3 348 68.7
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 2.9e-119 432.6 372 64.2
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 6.5e-119 431.4 258 85.3
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 6.5e-119 431.4 258 85.3
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 8.5e-119 431.0 262 83.2
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 1.1e-118 430.6 280 80.4
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 1.5e-118 430.3 339 69.3
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 1.5e-118 430.3 357 66.9
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.9e-118 429.9 258 84.5
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 1.9e-118 429.9 348 67.5
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 2.5e-118 429.5 310 74.2
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 3.2e-118 429.1 350 66.9
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 7.2e-118 427.9 280 79.6
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 9.4e-118 427.6 280 79.3
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 2.1e-117 426.4 280 78.9
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 2.7e-117 426.0 278 79.9
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 2.7e-117 426.0 280 78.6
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 2.7e-117 426.0 280 79.3
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 4.7e-117 425.2 278 79.1
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 4.7e-117 425.2 353 68.3
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 6.1e-117 424.9 327 69.7
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 6.1e-117 424.9 355 66.8
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 8.0e-117 424.5 330 68.5
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 1.0e-116 424.1 278 78.8
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 1.4e-116 423.7 265 81.9
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 1.4e-116 423.7 280 78.2
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 1.4e-116 423.7 265 81.9
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 1.4e-116 423.7 294 76.5
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 1.8e-116 423.3 280 77.9
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 2.3e-116 422.9 350 65.1
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 4.0e-116 422.2 288 76.7
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 5.2e-116 421.8 338 67.8
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 2.0e-115 419.9 330 68.5
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 4.9e-114 415.2 244 88.9
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 8.3e-114 414.5 350 66.6
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 4.3e-110 402.1 309 69.6
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 1.2e-109 400.6 282 74.1
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 1.6e-109 400.2 342 65.2
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 6.1e-109 398.3 397 58.9
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 1.0e-108 397.5 316 69.0
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 2.0e-107 393.3 359 61.8
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 3.4e-107 392.5 252 78.6
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 9.8e-107 391.0 276 75.0
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 8.3e-106 387.9 276 72.8
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 1.1e-105 387.5 318 64.2
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 5.4e-105 385.2 222 87.8
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 1.2e-104 384.0 245 79.2
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 1.2e-104 384.0 298 71.1
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 1.0e-103 380.9 247 78.1
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 5.0e-103 378.6 293 71.3
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 3.4e-99 365.9 262 72.1
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 7.0e-97 358.2 256 69.5
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 2.3e-95 353.2 344 59.0
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 2.6e-91 339.7 315 59.4
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 5.8e-91 338.6 242 71.1
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 2.2e-90 336.7 242 72.3
VMungo0720G1627 Vigna mungo HOM05D004794 ORTHO05D005875 5.8e-75 285.4 304 56.6
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 5.6e-62 242.3 154 80.5
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 2.8e-61 240.0 154 79.9
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 7.4e-54 215.3 150 73.3
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 7.4e-54 215.3 150 73.3
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 4.5e-43 179.5 108 87.0
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 1.8e-36 157.5 102 79.4
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.1e-36 156.8 99 80.8
C09p29960 Brassica napus HOM05D004794 ORTHO05D039171 5.0e-34 149.4 120 66.7
SEGI_19547 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 5.7e-30 136.0 119 61.3
BcaC04g21603 Brassica carinata HOM05D004794 ORTHO05D039171 6.5e-26 122.5 102 67.6
unitig_8.g3988 Utricularia gibba HOM05D004794 ORTHO05D005875 4.4e-22 109.8 61 95.1
BolC9t55859H Brassica oleracea HOM05D004794 ORTHO05D005875 5.9e-19 99.4 64 79.7


User provided reference genes

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