Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold376G50282 Striga asiatica HOM05D000618 ORTHO05D000454 1.2e-86 323.2 172 100.0
SGA_v2.0_scaffold334G49064 Striga asiatica HOM05D000618 ORTHO05D000454 3.7e-38 162.2 128 72.7
Migut.D00087 Erythranthe guttata HOM05D000618 ORTHO05D000454 1.0e-24 117.5 125 57.6
Atru.chr5.1016 Acer truncatum HOM05D000618 ORTHO05D000454 1.5e-23 113.6 155 45.2
MBI19_g33853_MAGBIO Magnolia biondii HOM05D000618 ORTHO05D000454 1.4e-18 97.1 207 36.7
C08p00120 Brassica napus HOM05D000618 ORTHO05D000454 3.2e-18 95.9 144 38.9
Haze_05031 Corylus avellana HOM05D000618 ORTHO05D000454 4.2e-18 95.5 124 49.2
GSVIVG01028110001 Vitis vinifera HOM05D000618 ORTHO05D000454 7.2e-18 94.7 123 49.6
Lalb_Chr18g0046741 Lupinus albus HOM05D000618 ORTHO05D000454 1.6e-17 93.6 121 45.5
Glyma.02G013000 Glycine max HOM05D000618 ORTHO05D000454 2.7e-17 92.8 125 43.2
VMungo0720G1903 Vigna mungo HOM05D000618 ORTHO05D000454 3.6e-17 92.4 129 42.6
Oeu008470.1 Olea europaea HOM05D000618 ORTHO05D000454 7.9e-17 91.3 109 50.5
AUR62011819 Chenopodium quinoa HOM05D000618 ORTHO05D000454 1.0e-16 90.9 127 45.7
Lalb_Chr21g0309551 Lupinus albus HOM05D000618 ORTHO05D000454 1.4e-16 90.5 128 45.3
arahy.Tifrunner.gnm1.ann1.5C222Z Arachis hypogaea HOM05D000618 ORTHO05D000454 1.8e-16 90.1 106 45.3
arahy.Tifrunner.gnm1.ann1.BD8YIG Arachis hypogaea HOM05D000618 ORTHO05D000454 1.8e-16 90.1 106 45.3
Glyma.19G215900 Glycine max HOM05D000618 ORTHO05D000454 1.8e-16 90.1 122 46.7
CANSAT25G1144 Cannabis sativa HOM05D000618 ORTHO05D000454 2.3e-16 89.7 123 43.1
Glyma.10G013600 Glycine max HOM05D000618 ORTHO05D000454 2.3e-16 89.7 125 40.8
MD03G1296100 Malus domestica HOM05D000618 ORTHO05D000454 2.3e-16 89.7 115 50.4
Gohir.A11G109600 Gossypium hirsutum HOM05D000618 ORTHO05D000454 3.0e-16 89.4 126 46.0
Lj1A18T25 Lonicera japonica HOM05D000618 ORTHO05D000454 3.9e-16 89.0 85 54.1
Lj5g0027995 Lotus japonicus HOM05D000618 ORTHO05D000454 3.9e-16 89.0 148 39.9
Gohir.D11G115000 Gossypium hirsutum HOM05D000618 ORTHO05D000454 5.1e-16 88.6 126 46.0
Cfa005810 Carpinus fangiana HOM05D000618 ORTHO05D000454 6.7e-16 88.2 126 47.6
Medtr1g087150 Medicago truncatula HOM05D000618 ORTHO05D000454 1.1e-15 87.4 112 44.6
CiPaw.08G090400 Carya illinoinensis HOM05D000618 ORTHO05D000454 1.5e-15 87.0 149 45.0
Lalb_Chr02g0146791 Lupinus albus HOM05D000618 ORTHO05D000454 1.5e-15 87.0 128 43.8
Dinv33111 Davidia involucrata HOM05D000618 ORTHO05D000454 2.0e-15 86.7 124 50.0
MD11G1315500 Malus domestica HOM05D000618 ORTHO05D000454 2.0e-15 86.7 108 51.9
Potri.014G121900 Populus trichocarpa HOM05D000618 ORTHO05D000454 2.6e-15 86.3 112 46.4
Hund09626 Selenicereus undatus HOM05D000618 ORTHO05D000454 2.6e-15 86.3 158 35.4
Thecc.01G312400 Theobroma cacao HOM05D000618 ORTHO05D000454 2.6e-15 86.3 123 42.3
Gorai.007G123200 Gossypium raimondii HOM05D000618 ORTHO05D000454 4.4e-15 85.5 107 47.7
Ciclev10021987m.g Citrus clementina HOM05D000618 ORTHO05D000454 5.7e-15 85.1 126 42.1
Glyma.03G219000 Glycine max HOM05D000618 ORTHO05D000454 9.7e-15 84.3 124 43.5
Oeu047392.1 Olea europaea HOM05D000618 ORTHO05D000454 9.7e-15 84.3 105 52.4
TWI18G0799 Tripterygium wilfordii HOM05D000618 ORTHO05D000454 9.7e-15 84.3 138 41.3
COL.COLO4_23241 Corchorus olitorius HOM05D000618 ORTHO05D000454 1.7e-14 83.6 123 40.7
CiPaw.07G116700 Carya illinoinensis HOM05D000618 ORTHO05D000454 2.2e-14 83.2 142 42.3
Eucgr.H01050 Eucalyptus grandis HOM05D000618 ORTHO05D000454 2.2e-14 83.2 132 40.9
Nn3g21674 Nelumbo nucifera HOM05D000618 ORTHO05D000454 2.2e-14 83.2 119 44.5
TPR.G19774 Trifolium pratense HOM05D000618 ORTHO05D000454 2.2e-14 83.2 119 39.5
Cc01_g21350 Coffea canephora HOM05D000618 ORTHO05D000454 2.8e-14 82.8 105 47.6
HanXRQChr15g0464151 Helianthus annuus HOM05D000618 ORTHO05D000454 2.8e-14 82.8 121 43.0
TAR362G0516 Trochodendron aralioides HOM05D000618 ORTHO05D000454 3.7e-14 82.4 116 46.6
CSS0006825 Camellia sinensis var. sinensis HOM05D000618 ORTHO05D000454 4.8e-14 82.0 111 46.8
Ca_09206_v3 Cicer arietinum L. HOM05D000618 ORTHO05D000454 4.8e-14 82.0 146 39.7
FAN13G2581 Fragaria x ananassa HOM05D000618 ORTHO05D000454 4.8e-14 82.0 85 55.3
Nn4g25616 Nelumbo nucifera HOM05D000618 ORTHO05D000454 4.8e-14 82.0 123 41.5
VMungo1383G1339 Vigna mungo HOM05D000618 ORTHO05D000454 6.3e-14 81.6 125 44.8
Lj1g0006144 Lotus japonicus HOM05D000618 ORTHO05D000454 8.2e-14 81.3 123 39.8
Psat6g161880 Pisum sativum HOM05D000618 ORTHO05D000454 1.1e-13 80.9 108 45.4
Duzib133G0314 Durio zibethinus HOM05D000618 ORTHO05D000454 1.4e-13 80.5 137 39.4
arahy.Tifrunner.gnm1.ann1.2SGZ7F Arachis hypogaea HOM05D000618 ORTHO05D000454 1.8e-13 80.1 123 42.3
arahy.Tifrunner.gnm1.ann1.YZ6HK5 Arachis hypogaea HOM05D000618 ORTHO05D000454 1.8e-13 80.1 123 43.1
RcHm_v2.0_Chr7g0241671 Rosa chinensis HOM05D000618 ORTHO05D000454 1.8e-13 80.1 105 49.5
Duzib211G0193 Durio zibethinus HOM05D000618 ORTHO05D000454 2.4e-13 79.7 148 37.2
Phvul.001G212400 Phaseolus vulgaris HOM05D000618 ORTHO05D000454 2.4e-13 79.7 102 46.1
FAN18G0386 Fragaria x ananassa HOM05D000618 ORTHO05D000454 3.1e-13 79.3 86 53.5
Hma1.2p1_0486F.1_g163160 Hydrangea macrophylla HOM05D000618 ORTHO05D000454 3.1e-13 79.3 103 46.6
FAN04G0189 Fragaria x ananassa HOM05D000618 ORTHO05D000454 4.1e-13 79.0 85 51.8
FAN08G1001 Fragaria x ananassa HOM05D000618 ORTHO05D000454 4.1e-13 79.0 85 51.8
BcaB03g15766 Brassica carinata HOM05D000618 ORTHO05D000454 5.3e-13 78.6 88 46.6
FvH4_5g39400 Fragaria vesca HOM05D000618 ORTHO05D000454 5.3e-13 78.6 85 52.9
FAN08G1098 Fragaria x ananassa HOM05D000618 ORTHO05D000454 5.3e-13 78.6 85 52.9
QL12p020105 Quercus lobata HOM05D000618 ORTHO05D000454 5.3e-13 78.6 108 44.4
Solyc01g079530.4 Solanum lycopersicum HOM05D000618 ORTHO05D000454 9.1e-13 77.8 98 46.9
Sabra14G0090300 Salix brachista HOM05D000618 ORTHO05D000454 1.5e-12 77.0 119 40.3
A08p37640 Brassica napus HOM05D000618 ORTHO05D000454 2.0e-12 76.6 96 42.7
BraA08t35660Z Brassica rapa HOM05D000618 ORTHO05D000454 2.0e-12 76.6 96 42.7
TPR.G4028 Trifolium pratense HOM05D000618 ORTHO05D000454 2.0e-12 76.6 97 45.4
Cpa.g.sc18.33 Carica papaya HOM05D000618 ORTHO05D000454 2.6e-12 76.3 121 41.3
DCAR_005764 Daucus carota HOM05D000618 ORTHO05D000454 2.6e-12 76.3 127 38.6
Psat3g020040 Pisum sativum HOM05D000618 ORTHO05D000454 3.4e-12 75.9 115 42.6
ClCG10G011360 Citrullus lanatus HOM05D000618 ORTHO05D000454 4.5e-12 75.5 82 47.6
ECA248G0565 Erigeron canadensis HOM05D000367 ORTHO05D004574 4.5e-12 75.5 119 42.9
Thhalv10008710m.g Eutrema salsugineum HOM05D000618 ORTHO05D000454 4.5e-12 75.5 74 48.6
Gohir.D12G129000 Gossypium hirsutum HOM05D000618 ORTHO05D000454 4.5e-12 75.5 119 39.5
Sed0017972 Sechium edule HOM05D000618 ORTHO05D000454 4.5e-12 75.5 124 39.5
PGSC0003DMG400009007 Solanum tuberosum HOM05D000618 ORTHO05D000454 4.5e-12 75.5 102 47.1
CsaV3_4G001190 Cucumis sativus L. HOM05D000618 ORTHO05D000454 5.9e-12 75.1 101 41.6
Gohir.A12G125300 Gossypium hirsutum HOM05D000618 ORTHO05D000454 5.9e-12 75.1 116 39.7
Peaxi162Scf00691g00017 Petunia axillaris HOM05D000618 ORTHO05D000454 5.9e-12 75.1 101 46.5
Sopen01g031300 Solanum pennellii HOM05D000618 ORTHO05D000454 5.9e-12 75.1 97 46.4
BolC8t46814H Brassica oleracea HOM05D000618 ORTHO05D000454 7.7e-12 74.7 120 37.5
ECA236G1170 Erigeron canadensis HOM05D000618 ORTHO05D000454 7.7e-12 74.7 108 45.4
Gorai.008G140100 Gossypium raimondii HOM05D000618 ORTHO05D000454 7.7e-12 74.7 116 40.5
Medtr7g109460 Medicago truncatula HOM05D000618 ORTHO05D000454 7.7e-12 74.7 132 41.7
Nitab4.5_0008811g0010 Nicotiana tabacum HOM05D000618 ORTHO05D000454 7.7e-12 74.7 122 41.8
CAN.G777.7 Capsicum annuum HOM05D000618 ORTHO05D000454 1.0e-11 74.3 99 44.4
CARHR001900 Cardamine hirsuta HOM05D000618 ORTHO05D000454 1.0e-11 74.3 101 42.6
Nitab4.5_0001301g0070 Nicotiana tabacum HOM05D000618 ORTHO05D000454 1.0e-11 74.3 101 46.5
Sp6g01960 Schrenkiella parvula HOM05D000618 ORTHO05D000454 1.7e-11 73.6 82 45.1
Sp1g01610 Schrenkiella parvula HOM05D000618 ORTHO05D000454 2.2e-11 73.2 74 47.3
vmacro02408 Vaccinium macrocarpon HOM05D000618 ORTHO05D000454 2.2e-11 73.2 134 38.8
PGR119G0154 Punica granatum HOM05D000618 ORTHO05D000454 3.8e-11 72.4 142 35.9
C05p01320 Brassica napus HOM05D000618 ORTHO05D000454 5.0e-11 72.0 102 39.2
BolC5t28914H Brassica oleracea HOM05D000618 ORTHO05D000454 5.0e-11 72.0 102 39.2
HanXRQChr06g0168211 Helianthus annuus HOM05D000618 ORTHO05D000454 5.0e-11 72.0 106 43.4
Potri.002G196600 Populus trichocarpa HOM05D000618 ORTHO05D000454 6.5e-11 71.6 102 42.2
BcaB03g13508 Brassica carinata HOM05D000618 ORTHO05D000454 8.5e-11 71.2 99 40.4
Duzib138G1146 Durio zibethinus HOM05D000618 ORTHO05D000454 8.5e-11 71.2 156 36.5
TAR633G1555 Trochodendron aralioides HOM05D000618 ORTHO05D000454 8.5e-11 71.2 122 42.6
A10p01320 Brassica napus HOM05D000618 ORTHO05D000454 1.4e-10 70.5 102 38.2
BraA10t42410Z Brassica rapa HOM05D000618 ORTHO05D000454 1.4e-10 70.5 102 38.2
CDE12G0150 Ceratophyllum demersum HOM05D002174 ORTHO05D005447 1.4e-10 70.5 173 34.1
Ca_10288_v3 Cicer arietinum L. HOM05D000618 ORTHO05D000454 1.4e-10 70.5 113 38.1
Os01g0303600 Oryza sativa ssp. japonica HOM05D000618 ORTHO05D000454 2.5e-10 69.7 110 41.8
Lalb_Chr15g0078221 Lupinus albus HOM05D000618 ORTHO05D000454 3.2e-10 69.3 93 44.1
Manes.01G227100 Manihot esculenta HOM05D000618 ORTHO05D000454 3.2e-10 69.3 133 35.3
AL1G11930 Arabidopsis lyrata HOM05D000618 ORTHO05D000454 4.2e-10 68.9 102 37.3
THA.LOC104801569 Tarenaya hassleriana HOM05D000618 ORTHO05D000454 4.2e-10 68.9 101 37.6
AT1G02610 Arabidopsis thaliana HOM05D000618 ORTHO05D000454 5.5e-10 68.6 103 37.9
Carub.0001s0165 Capsella rubella HOM05D000618 ORTHO05D000454 5.5e-10 68.6 78 46.2
Sc24g0003230 Simmondsia chinensis HOM05D000618 ORTHO05D000454 7.2e-10 68.2 123 39.0
PSO357G0687 Papaver somniferum HOM05D000618 ORTHO05D000454 1.2e-09 67.4 107 37.4
Zm00001eb130210 Zea mays HOM05D000618 ORTHO05D000454 2.1e-09 66.6 146 32.9
Zm00001eb340290 Zea mays HOM05D000618 ORTHO05D000454 2.1e-09 66.6 113 38.1
HanXRQChr01g0000801 Helianthus annuus HOM05D000618 ORTHO05D000454 2.7e-09 66.2 79 46.8
Peaxi162Scf00058g02710 Petunia axillaris HOM05D000618 ORTHO05D000454 2.7e-09 66.2 102 42.2
SalBow2G3069 Salvia bowleyana HOM05D000618 ORTHO05D000454 3.6e-09 65.9 120 39.2
Ah.02g112240 Amaranthus hybridus HOM05D000618 ORTHO05D000454 8.0e-09 64.7 90 46.7
PSO170G2628 Papaver somniferum HOM05D000618 ORTHO05D000454 1.4e-08 63.9 107 36.4
AT4G02075 Arabidopsis thaliana HOM05D000618 ORTHO05D000454 1.8e-08 63.5 78 39.7
CARHR249600 Cardamine hirsuta HOM05D000618 ORTHO05D000454 1.8e-08 63.5 123 33.3
Sed0002094 Sechium edule HOM05D000618 ORTHO05D000454 5.2e-08 62.0 99 37.4
Thhalv10029217m.g Eutrema salsugineum HOM05D000618 ORTHO05D000454 6.7e-08 61.6 77 39.0
Carub.0006s3515 Capsella rubella HOM05D000618 ORTHO05D000454 8.8e-08 61.2 80 41.2
THA.LOC104825940 Tarenaya hassleriana HOM05D000618 ORTHO05D000454 3.3e-07 59.3 68 42.6
ATR0326G063 Amborella trichopoda HOM05D000618 ORTHO05D000454 4.4e-07 58.9 72 45.8
arahy.Tifrunner.gnm1.ann1.ER1SE5 Arachis hypogaea HOM05D000618 ORTHO05D000454 7.4e-07 58.2 56 51.8
AUR62024663 Chenopodium quinoa HOM05D000618 ORTHO05D000454 7.4e-07 58.2 80 47.5
PGSC0003DMG400030557 Solanum tuberosum HOM05D000618 ORTHO05D000454 9.7e-07 57.8 113 31.0
arahy.Tifrunner.gnm1.ann1.1V8IX6 Arachis hypogaea HOM05D000618 ORTHO05D000454 1.3e-06 57.4 59 50.8
CiPaw.04G045300 Carya illinoinensis HOM05D000618 ORTHO05D000454 1.7e-06 57.0 92 35.9
TAR374G0631 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.2e-06 56.6 96 35.4
Peaxi162Scf00205g00619 Petunia axillaris HOM05D000618 ORTHO05D000454 3.7e-06 55.8 113 28.3
BcaB01g02081 Brassica carinata HOM05D000618 ORTHO05D000454 4.8e-06 55.5 69 39.1
MBI16_g21186_MAGBIO Magnolia biondii HOM05D000618 ORTHO05D000454 6.3e-06 55.1 87 36.8
BcaC04g24033 Brassica carinata HOM05D000618 ORTHO05D000454 8.2e-06 54.7 69 39.1
A09p01530 Brassica napus HOM05D000618 ORTHO05D000454 8.2e-06 54.7 69 39.1
Solyc05g008390.3 Solanum lycopersicum HOM05D000618 ORTHO05D000454 8.2e-06 54.7 84 32.1


User provided reference genes

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