Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold376G50276 Striga asiatica HOM05D001935 ORTHO05D010109 8.7e-78 293.5 143 100.0
SalBow3G1122 Salvia bowleyana HOM05D001935 ORTHO05D010109 2.8e-31 139.0 155 52.3
Oeu038015.2 Olea europaea HOM05D001935 ORTHO05D010109 1.1e-22 110.5 147 43.5
TAR633G2657 Trochodendron aralioides HOM05D001935 ORTHO05D010109 6.8e-22 107.8 155 41.9
Hma1.2p1_0486F.1_g163095 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 1.3e-20 103.6 160 40.0
Hma1.2p1_0486F.1_g163120 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 1.3e-20 103.6 160 40.0
CiPaw.07G116400 Carya illinoinensis HOM05D001935 ORTHO05D010109 2.2e-20 102.8 161 40.4
TWI36G1013 Tripterygium wilfordii HOM05D001935 ORTHO05D010109 2.9e-20 102.4 161 41.6
Cpa.g.sc18.27 Carica papaya HOM05D001935 ORTHO05D010109 2.4e-19 99.4 166 39.8
MELO3C015930.2 Cucumis melo HOM05D001935 ORTHO05D010109 2.4e-19 99.4 156 39.1
Thecc.01G311900 Theobroma cacao HOM05D001935 ORTHO05D010109 7.0e-19 97.8 142 39.4
CiPaw.08G090700 Carya illinoinensis HOM05D001935 ORTHO05D010109 9.2e-19 97.4 147 40.8
CSS0010042 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 1.2e-18 97.1 122 47.5
CSS0012652 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 1.2e-18 97.1 122 47.5
CSS0036092 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 1.2e-18 97.1 162 38.9
Manes.01G226900 Manihot esculenta HOM05D001935 ORTHO05D010109 2.1e-18 96.3 156 35.3
COL.COLO4_23245 Corchorus olitorius HOM05D001935 ORTHO05D010109 4.6e-18 95.1 163 39.3
TAR362G0690 Trochodendron aralioides HOM05D001136 ORTHO05D010109 4.6e-18 95.1 146 40.4
Cfa005813 Carpinus fangiana HOM05D001935 ORTHO05D010109 6.0e-18 94.7 166 38.0
Dinv10084 Davidia involucrata HOM05D001935 ORTHO05D010109 6.0e-18 94.7 115 44.3
Duzib138G0891 Durio zibethinus HOM05D001935 ORTHO05D010109 6.0e-18 94.7 162 37.0
Dinv10085 Davidia involucrata HOM05D001935 ORTHO05D010109 1.3e-17 93.6 119 44.5
Gohir.A07G128000 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.3e-17 93.6 147 37.4
Sabra16G0129700 Salix brachista HOM05D001935 ORTHO05D010109 2.3e-17 92.8 166 36.1
Sed0011579 Sechium edule HOM05D001935 ORTHO05D010109 3.0e-17 92.4 151 35.1
Haze_05029 Corylus avellana HOM05D001935 ORTHO05D010109 3.9e-17 92.0 165 36.4
Gohir.D07G132400 Gossypium hirsutum HOM05D001935 ORTHO05D010109 3.9e-17 92.0 147 36.7
Gorai.001G143800 Gossypium raimondii HOM05D001935 ORTHO05D010109 5.0e-17 91.7 147 36.7
ClCG09G005160 Citrullus lanatus HOM05D001935 ORTHO05D010109 8.6e-17 90.9 156 36.5
Potri.006G105500 Populus trichocarpa HOM05D001935 ORTHO05D010109 8.6e-17 90.9 166 39.2
Potri.006G105600 Populus trichocarpa HOM05D001935 ORTHO05D010109 1.1e-16 90.5 166 39.2
unitig_0.g277 Utricularia gibba HOM05D001935 ORTHO05D010109 1.1e-16 90.5 156 38.5
Gorai.008G140400 Gossypium raimondii HOM05D001935 ORTHO05D010109 1.5e-16 90.1 149 36.2
QL12p020164 Quercus lobata HOM05D001935 ORTHO05D010109 1.5e-16 90.1 159 38.4
Gohir.D12G129300 Gossypium hirsutum HOM05D001935 ORTHO05D010109 2.5e-16 89.4 151 36.4
Atru.chr5.1021 Acer truncatum HOM05D001935 ORTHO05D010109 9.5e-16 87.4 174 36.8
Sed0028026 Sechium edule HOM05D001935 ORTHO05D010109 9.5e-16 87.4 151 33.8
Gohir.A12G125800 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.2e-15 87.0 151 35.1
Rhsim13G0005200 Rhododendron simsii HOM05D001935 ORTHO05D010109 1.2e-15 87.0 142 37.3
Atru.chr5.1024 Acer truncatum HOM05D001935 ORTHO05D010109 2.1e-15 86.3 174 36.8
ATR0706G209 Amborella trichopoda HOM05D001935 ORTHO05D010109 2.1e-15 86.3 161 36.6
Ah.11g049310 Amaranthus hybridus HOM05D001935 ORTHO05D010109 3.6e-15 85.5 165 37.0
Rhsim13G0005300 Rhododendron simsii HOM05D001935 ORTHO05D010109 6.2e-15 84.7 142 37.3
EL10As5g23517 Beta vulgaris HOM05D001935 ORTHO05D010109 8.1e-15 84.3 162 37.7
Actinidia21004 Actinidia chinensis HOM05D001136 ORTHO05D001144 1.1e-14 84.0 127 38.6
Potri.016G128800 Populus trichocarpa HOM05D001935 ORTHO05D010109 1.4e-14 83.6 170 35.3
Gorai.007G123300 Gossypium raimondii HOM05D001935 ORTHO05D010109 2.3e-14 82.8 133 39.8
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 3.1e-14 82.4 107 43.0
Aqoxy2G01830 Aquilegia oxysepala HOM05D001935 ORTHO05D010109 4.0e-14 82.0 160 35.6
Psat3g020520 Pisum sativum HOM05D001935 ORTHO05D010109 4.0e-14 82.0 159 35.8
AUR62024666 Chenopodium quinoa HOM05D001935 ORTHO05D010109 5.2e-14 81.6 151 37.1
EL10As5g23516 Beta vulgaris HOM05D001935 ORTHO05D010109 6.8e-14 81.3 169 35.5
Medtr7g109420 Medicago truncatula HOM05D001935 ORTHO05D010109 6.8e-14 81.3 159 34.6
PGR044G2318 Punica granatum HOM05D001935 ORTHO05D010109 6.8e-14 81.3 161 37.3
AUR62011822 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.2e-13 80.5 145 37.9
Gohir.A11G109500 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.5e-13 80.1 151 38.4
Glyma.19G215700 Glycine max HOM05D001935 ORTHO05D010109 2.0e-13 79.7 156 37.2
Gohir.D11G115100 Gossypium hirsutum HOM05D001935 ORTHO05D010109 2.0e-13 79.7 133 38.3
Sabra06G0082000 Salix brachista HOM05D001935 ORTHO05D010109 3.4e-13 79.0 163 36.8
GSVIVG01028106001 Vitis vinifera HOM05D001935 ORTHO05D010109 4.4e-13 78.6 148 35.8
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 9.9e-13 77.4 113 37.2
AUR62024667 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.1e-11 73.9 143 36.4
CsaV3_7G029910 Cucumis sativus L. HOM05D001935 ORTHO05D010109 1.1e-11 73.9 88 43.2
Eucgr.H01053 Eucalyptus grandis HOM05D001935 ORTHO05D010109 1.4e-11 73.6 165 32.7
Ciclev10022487m.g Citrus clementina HOM05D001935 ORTHO05D010109 1.9e-11 73.2 126 37.3
DCAR_005768 Daucus carota HOM05D001935 ORTHO05D010109 1.9e-11 73.2 113 37.2
Ca_09205_v3 Cicer arietinum L. HOM05D001935 ORTHO05D010109 3.2e-11 72.4 134 37.3
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 3.2e-11 72.4 106 38.7
Peaxi162Scf00119g00143 Petunia axillaris HOM05D001935 ORTHO05D001700 4.1e-11 72.0 167 36.5
Zm00001eb340260 Zea mays HOM05D001935 ORTHO05D010109 4.1e-11 72.0 114 39.5
Ah.02g112210 Amaranthus hybridus HOM05D001935 ORTHO05D010109 9.2e-11 70.9 146 34.9
Lj1g0023097 Lotus japonicus HOM05D001935 ORTHO05D010109 1.6e-10 70.1 140 33.6
TPR.G4060 Trifolium pratense HOM05D001935 ORTHO05D010109 3.5e-10 68.9 142 33.8
Glyma.03G218900 Glycine max HOM05D001935 ORTHO05D010109 5.1e-09 65.1 144 35.4
Os01g0304400 Oryza sativa ssp. japonica HOM05D001935 ORTHO05D010109 6.6e-09 64.7 126 35.7
Phvul.001G212300 Phaseolus vulgaris HOM05D001935 ORTHO05D010109 2.5e-08 62.8 132 35.6
Dinv12075 Davidia involucrata HOM05D001935 ORTHO05D010109 3.3e-08 62.4 76 44.7
Cc11_g09100 Coffea canephora HOM05D001935 ORTHO05D001700 4.3e-08 62.0 119 37.8
Nitab4.5_0001648g0030 Nicotiana tabacum HOM05D001935 ORTHO05D001700 4.3e-08 62.0 119 38.7
Nitab4.5_0000414g0010 Nicotiana tabacum HOM05D001935 ORTHO05D001700 5.6e-08 61.6 119 37.8
PGSC0003DMG400005992 Solanum tuberosum HOM05D001935 ORTHO05D001700 1.2e-07 60.5 162 35.2
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 2.8e-07 59.3 122 34.4
VMungo1383G2590 Vigna mungo HOM05D001935 ORTHO05D010109 3.6e-07 58.9 125 31.2
Os05g0552800 Oryza sativa ssp. japonica HOM05D001935 ORTHO05D001700 4.7e-07 58.5 106 34.0
Solyc04g007580.1 Solanum lycopersicum HOM05D001935 ORTHO05D001700 4.7e-07 58.5 158 34.2
SGA_v2.0_scaffold202G41490 Striga asiatica HOM05D001935 ORTHO05D001700 1.1e-06 57.4 124 34.7
SEGI_14616 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 1.4e-06 57.0 121 32.2
SGA_v2.0_scaffold49G18130 Striga asiatica HOM05D001935 ORTHO05D001700 1.4e-06 57.0 166 31.9
Sopen04g002660 Solanum pennellii HOM05D001935 ORTHO05D001700 2.4e-06 56.2 124 33.9
unitig_24.g30589 Utricularia gibba HOM05D001935 ORTHO05D001700 2.4e-06 56.2 164 29.9
MSTRG.15313 Avicennia marina HOM05D001935 ORTHO05D001700 3.1e-06 55.8 101 38.6
ECA238G1875 Erigeron canadensis HOM05D001935 ORTHO05D001700 3.1e-06 55.8 114 34.2
Phvul.007G035500 Phaseolus vulgaris HOM05D001935 ORTHO05D001700 3.1e-06 55.8 165 31.5
Sed0026428 Sechium edule HOM05D001935 ORTHO05D001700 3.1e-06 55.8 163 31.3
Glyma.10G266300 Glycine max HOM05D001935 ORTHO05D001700 4.0e-06 55.5 125 35.2
Dinv16185 Davidia involucrata HOM05D001935 ORTHO05D001700 5.2e-06 55.1 136 33.8
Glyma.20G124200 Glycine max HOM05D001935 ORTHO05D001700 5.2e-06 55.1 134 32.1
TAR374G0867 Trochodendron aralioides HOM05D001935 ORTHO05D001700 5.2e-06 55.1 129 30.2
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 8.9e-06 54.3 123 34.1
Oeu030802.1 Olea europaea HOM05D001935 ORTHO05D001700 8.9e-06 54.3 161 31.7
Potri.010G116000 Populus trichocarpa HOM05D001935 ORTHO05D001700 8.9e-06 54.3 123 32.5
Thecc.02G277900 Theobroma cacao HOM05D001935 ORTHO05D001700 8.9e-06 54.3 125 34.4


User provided reference genes

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