Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold376G50266 Striga asiatica HOM05D006128 ORTHO05D007466 3.5e-107 391.7 214 100.0
Cpa.g.sc18.8 Carica papaya HOM05D006128 ORTHO05D007466 1.8e-58 229.9 198 64.1
Manes.05G001900 Manihot esculenta HOM05D006128 ORTHO05D007466 1.5e-57 226.9 197 66.0
QL12p028969 Quercus lobata HOM05D006128 ORTHO05D007466 1.5e-57 226.9 197 63.5
CSS0018421 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 2.6e-57 226.1 180 68.9
CSS0035054 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 2.6e-57 226.1 180 68.9
GSVIVG01028088001 Vitis vinifera HOM05D006128 ORTHO05D007466 2.6e-57 226.1 180 69.4
Peaxi162Scf00001g00252 Petunia axillaris HOM05D006128 ORTHO05D007466 1.3e-56 223.8 181 68.5
Solyc01g079640.4 Solanum lycopersicum HOM05D006128 ORTHO05D007466 1.3e-56 223.8 183 68.9
Sopen01g031420 Solanum pennellii HOM05D006128 ORTHO05D007466 1.3e-56 223.8 183 68.9
Ciclev10021788m.g Citrus clementina HOM05D006128 ORTHO05D007466 1.7e-56 223.4 199 63.8
Glyma.02G014100 Glycine max HOM05D006128 ORTHO05D007466 1.7e-56 223.4 180 67.8
PGSC0003DMG400009003 Solanum tuberosum HOM05D006128 ORTHO05D007466 1.7e-56 223.4 183 68.3
MELO3C032866.2 Cucumis melo HOM05D006128 ORTHO05D007466 2.2e-56 223.0 195 64.6
Gorai.004G050700 Gossypium raimondii HOM05D006128 ORTHO05D007466 3.7e-56 222.2 203 63.1
Cc08_g11810 Coffea canephora HOM05D006128 ORTHO05D007466 6.3e-56 221.5 197 62.9
CAN.G69.3 Capsicum annuum HOM05D006128 ORTHO05D007466 8.3e-56 221.1 181 65.7
Migut.D00098 Erythranthe guttata HOM05D006128 ORTHO05D007466 1.1e-55 220.7 180 68.9
Prupe.8G269800 Prunus persica HOM05D006128 ORTHO05D007466 1.1e-55 220.7 197 61.9
Gohir.D08G051000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.4e-55 220.3 203 62.6
Nn3g21633 Nelumbo nucifera HOM05D006128 ORTHO05D007466 1.4e-55 220.3 196 62.8
Manes.01G226000 Manihot esculenta HOM05D006128 ORTHO05D007466 2.4e-55 219.5 240 55.4
Gohir.A08G040900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 3.1e-55 219.2 201 62.2
Cfa005831 Carpinus fangiana HOM05D006128 ORTHO05D007466 5.4e-55 218.4 197 63.5
Hma1.2p1_1302F.1_g274310 Hydrangea macrophylla HOM05D006128 ORTHO05D007466 5.4e-55 218.4 178 67.4
Nitab4.5_0000116g0090 Nicotiana tabacum HOM05D006128 ORTHO05D007466 7.0e-55 218.0 181 67.4
Potri.014G122900 Populus trichocarpa HOM05D006128 ORTHO05D007466 7.0e-55 218.0 215 58.6
Duzib138G0044 Durio zibethinus HOM05D006128 ORTHO05D007466 9.1e-55 217.6 180 67.2
Nitab4.5_0000906g0110 Nicotiana tabacum HOM05D006128 ORTHO05D007466 9.1e-55 217.6 181 67.4
CsaV3_4G001120 Cucumis sativus L. HOM05D006128 ORTHO05D007466 1.2e-54 217.2 196 62.8
Haze_05012 Corylus avellana HOM05D006128 ORTHO05D007466 1.6e-54 216.9 197 63.5
Potri.002G198400 Populus trichocarpa HOM05D006128 ORTHO05D007466 1.6e-54 216.9 197 62.4
Atru.chr5.1049 Acer truncatum HOM05D006128 ORTHO05D007466 2.0e-54 216.5 218 56.9
FAN04G2463 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.0e-54 216.5 197 60.9
FAN13G2048 Fragaria x ananassa HOM05D006128 ORTHO05D007466 2.0e-54 216.5 197 60.9
FvH4_5g39570 Fragaria vesca HOM05D006128 ORTHO05D007466 3.5e-54 215.7 197 60.9
FAN08G0466 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.5e-54 215.7 197 60.9
FAN18G2733 Fragaria x ananassa HOM05D006128 ORTHO05D007466 3.5e-54 215.7 197 60.9
Phvul.007G216000 Phaseolus vulgaris HOM05D006128 ORTHO05D007466 4.5e-54 215.3 177 67.8
Lj1A19T25 Lonicera japonica HOM05D006128 ORTHO05D007466 5.9e-54 214.9 195 63.6
TAR633G2533 Trochodendron aralioides HOM05D006128 ORTHO05D007466 7.7e-54 214.5 197 61.9
Ca_10299_v3 Cicer arietinum L. HOM05D006128 ORTHO05D007466 1.0e-53 214.2 199 61.3
MBI19_g22894_MAGBIO Magnolia biondii HOM05D006128 ORTHO05D007466 1.3e-53 213.8 183 65.6
VMungo0720G2147 Vigna mungo HOM05D006128 ORTHO05D007466 1.7e-53 213.4 200 62.0
MD11G1317000 Malus domestica HOM05D006128 ORTHO05D007466 2.2e-53 213.0 196 62.2
Sed0005948 Sechium edule HOM05D006128 ORTHO05D007466 2.9e-53 212.6 188 64.9
Lj5g0013562 Lotus japonicus HOM05D006128 ORTHO05D007466 3.8e-53 212.2 219 60.7
Hund09615 Selenicereus undatus HOM05D006128 ORTHO05D007466 3.8e-53 212.2 196 62.2
PSO170G2201 Papaver somniferum HOM05D006128 ORTHO05D007466 8.5e-53 211.1 200 60.5
TWI36G0171 Tripterygium wilfordii HOM05D006128 ORTHO05D007466 1.1e-52 210.7 197 61.4
Sabra02G0159200 Salix brachista HOM05D002340 ORTHO05D003624 1.5e-52 210.3 197 61.9
PSO357G0491 Papaver somniferum HOM05D006128 ORTHO05D007466 1.9e-52 209.9 200 60.0
Gorai.008G141200 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.5e-52 209.5 179 64.8
COL.COLO4_23260 Corchorus olitorius HOM05D006128 ORTHO05D007466 3.2e-52 209.1 201 63.7
Gohir.D12G130000 Gossypium hirsutum HOM05D006128 ORTHO05D007466 9.4e-52 207.6 179 64.2
vmacro15124 Vaccinium macrocarpon HOM05D006128 ORTHO05D007466 1.2e-51 207.2 182 63.7
DCAR_002874 Daucus carota HOM05D006128 ORTHO05D007466 2.7e-51 206.1 196 60.7
MD03G1297200 Malus domestica HOM05D006128 ORTHO05D007466 2.7e-51 206.1 180 63.9
Gohir.A12G126500 Gossypium hirsutum HOM05D006128 ORTHO05D007466 4.7e-51 205.3 179 63.1
THA.LOC104801298 Tarenaya hassleriana HOM05D006128 ORTHO05D007466 4.7e-51 205.3 171 67.3
Actinidia25836 Actinidia chinensis HOM05D006128 ORTHO05D007466 6.1e-51 204.9 179 64.2
CiPaw.07G115100 Carya illinoinensis HOM05D006128 ORTHO05D007466 6.1e-51 204.9 225 56.9
HanXRQChr15g0464211 Helianthus annuus HOM05D006128 ORTHO05D007466 8.0e-51 204.5 176 66.5
EL10As5g23499 Beta vulgaris HOM05D006128 ORTHO05D007466 1.4e-50 203.8 180 64.4
Lalb_Chr02g0146681 Lupinus albus HOM05D006128 ORTHO05D007466 2.3e-50 203.0 201 60.2
PGR044G1105 Punica granatum HOM05D006128 ORTHO05D007466 2.3e-50 203.0 217 58.1
Dinv33101 Davidia involucrata HOM05D006128 ORTHO05D007466 3.0e-50 202.6 171 66.1
ECA236G3461 Erigeron canadensis HOM05D001958 ORTHO05D001971 4.0e-50 202.2 190 63.2
Rhsim01G0289400 Rhododendron simsii HOM05D006128 ORTHO05D007466 6.8e-50 201.4 227 53.3
BcaB01g02428 Brassica carinata HOM05D006128 ORTHO05D007466 1.2e-49 200.7 198 58.6
Oeu008455.2 Olea europaea HOM05D006128 ORTHO05D007466 1.5e-49 200.3 209 57.9
TAR362G1032 Trochodendron aralioides HOM05D006128 ORTHO05D007466 1.5e-49 200.3 197 59.9
Gorai.007G124300 Gossypium raimondii HOM05D006128 ORTHO05D007466 2.0e-49 199.9 217 53.9
TPR.G19756 Trifolium pratense HOM05D006128 ORTHO05D007466 2.0e-49 199.9 197 58.4
A03p31200 Brassica napus HOM05D006128 ORTHO05D007466 3.4e-49 199.1 195 59.5
BraA03t12299Z Brassica rapa HOM05D006128 ORTHO05D007466 3.4e-49 199.1 195 59.5
Medtr1g087500 Medicago truncatula HOM05D006128 ORTHO05D007466 3.4e-49 199.1 197 58.9
Psat6g163320 Pisum sativum HOM05D006128 ORTHO05D007466 7.5e-49 198.0 199 56.8
AL4G17994 Arabidopsis lyrata HOM05D006128 ORTHO05D007466 1.3e-48 197.2 203 58.6
AT2G25920 Arabidopsis thaliana HOM05D006128 ORTHO05D007466 8.3e-48 194.5 202 57.9
Sabra14G0091300 Salix brachista HOM05D006128 ORTHO05D007466 1.1e-47 194.1 225 56.4
arahy.Tifrunner.gnm1.ann1.G5X8S7 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.8e-47 193.4 200 58.5
Thhalv10028896m.g Eutrema salsugineum HOM05D006128 ORTHO05D007466 2.4e-47 193.0 196 59.2
Carub.0004s0574 Capsella rubella HOM05D006128 ORTHO05D007466 5.4e-47 191.8 204 56.9
Sp6g02010 Schrenkiella parvula HOM05D006128 ORTHO05D007466 3.5e-46 189.1 177 62.7
BcaC01g06774 Brassica carinata HOM05D006128 ORTHO05D007466 4.5e-46 188.7 221 57.9
C03p38040 Brassica napus HOM05D006128 ORTHO05D007466 4.5e-46 188.7 221 57.9
BolC3t16089H Brassica oleracea HOM05D006128 ORTHO05D007466 4.5e-46 188.7 221 57.9
Aqoxy2G02213 Aquilegia oxysepala HOM05D006128 ORTHO05D007466 1.0e-45 187.6 179 59.2
unitig_52.g16838 Utricularia gibba HOM05D006128 ORTHO05D007466 1.0e-45 187.6 193 57.0
CARHR290840 Cardamine hirsuta HOM05D006128 ORTHO05D007466 1.5e-44 183.7 193 57.5
arahy.Tifrunner.gnm1.ann1.M4G7E6 Arachis hypogaea HOM05D006128 ORTHO05D007466 1.9e-44 183.3 225 51.6
Glyma.10G014800 Glycine max HOM05D006128 ORTHO05D007466 1.9e-44 183.3 181 59.7
CANSAT35G0097 Cannabis sativa HOM05D006128 ORTHO05D007466 3.3e-44 182.6 219 52.5
Os05g0156200 Oryza sativa ssp. japonica HOM05D006128 ORTHO05D007466 3.6e-43 179.1 180 59.4
Zm00001eb345660 Zea mays HOM05D006128 ORTHO05D007466 8.0e-43 177.9 181 57.5
Ah.02g112110 Amaranthus hybridus HOM05D006128 ORTHO05D007466 1.0e-42 177.6 170 58.2
Thecc.01G310500 Theobroma cacao HOM05D006128 ORTHO05D007466 4.0e-42 175.6 156 64.7
HPP92_016959 Vanilla planifolia HOM05D006128 ORTHO05D007466 7.5e-41 171.4 173 56.6
Duzib133G0480 Durio zibethinus HOM05D006128 ORTHO05D007466 9.8e-41 171.0 156 63.5
AUR62024680 Chenopodium quinoa HOM05D006128 ORTHO05D007466 6.4e-40 168.3 157 64.3
AUR62011838 Chenopodium quinoa HOM05D006128 ORTHO05D007466 8.3e-40 167.9 157 64.3
CDE05G1506 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 1.2e-38 164.1 183 55.7
Sc18g0005360 Simmondsia chinensis HOM05D006128 ORTHO05D007466 2.0e-38 163.3 169 59.2
CDE11G0626 Ceratophyllum demersum HOM05D006128 ORTHO05D007466 2.7e-38 162.9 196 53.6
Aa31LG5G1800 Aethionema arabicum HOM05D004824 ORTHO05D007466 5.0e-37 158.7 235 47.2
Gohir.A11G110900 Gossypium hirsutum HOM05D006128 ORTHO05D007466 1.0e-34 151.0 171 52.6
Zm00001eb340800 Zea mays HOM05D006128 ORTHO05D007466 3.1e-34 149.4 199 49.2
ClCG10G011230 Citrullus lanatus HOM05D006128 ORTHO05D007466 5.2e-34 148.7 350 34.9
ATR0706G106 Amborella trichopoda HOM05D006128 ORTHO05D007466 5.8e-33 145.2 206 49.0
Lsat_1_v5_gn_8_166381 Lactuca sativa HOM05D001134 ORTHO05D001035 6.4e-32 141.7 166 56.6
Eucgr.K03529 Eucalyptus grandis HOM05D006128 ORTHO05D007466 1.9e-31 140.2 137 62.0
RcHm_v2.0_Chr7g0241881 Rosa chinensis HOM05D006128 ORTHO05D007466 2.7e-30 136.3 136 56.6
CSS0004097 Camellia sinensis var. sinensis HOM05D006128 ORTHO05D007466 4.6e-30 135.6 122 62.3
CARHR290820 Cardamine hirsuta HOM05D006128 ORTHO05D007466 4.3e-28 129.0 136 55.9
Gohir.D11G116100 Gossypium hirsutum HOM05D006128 ORTHO05D007466 6.2e-27 125.2 138 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1223 Anthoceros agrestis HOM05D006128 ORTHO05D007466 2.4e-23 113.2 200 41.0
Pp3c13_5550 Physcomitrium patens HOM05D006128 ORTHO05D007466 2.4e-23 113.2 231 42.0
Sc18g0005490 Simmondsia chinensis HOM05D006128 ORTHO05D007466 3.9e-21 105.9 129 56.6
Mapoly0184s0013 Marchantia polymorpha HOM05D006128 ORTHO05D007466 3.6e-19 99.4 210 40.5
Lalb_Chr21g0309471 Lupinus albus HOM05D006128 ORTHO05D007466 8.1e-19 98.2 212 38.2
SHI19763 Sapria himalayana HOM05D006128 ORTHO05D007466 1.8e-18 97.1 120 48.3
MSTRG.18115 Avicennia marina HOM05D006128 ORTHO05D007466 9.9e-17 91.3 91 58.2
RcHm_v2.0_Chr7g0241891 Rosa chinensis HOM05D006128 ORTHO05D007466 1.4e-15 87.4 76 59.2
SEGI_18845 Sequoiadendron giganteum HOM05D006128 ORTHO05D007466 3.3e-12 76.3 61 62.3
A03p31210 Brassica napus HOM05D000040 ORTHO05D000267 1.6e-11 73.9 116 44.8
Pp3c3_2220 Physcomitrium patens HOM05D006128 ORTHO05D007466 1.6e-11 73.9 158 43.7
Oeu047380.1 Olea europaea HOM05D006128 ORTHO05D007466 2.1e-11 73.6 52 71.2
SHI19767 Sapria himalayana HOM05D006128 ORTHO05D007466 4.7e-11 72.4 62 58.1
CARHR290830 Cardamine hirsuta HOM05D006128 ORTHO05D007466 6.9e-10 68.6 83 49.4
BraA03t12301Z Brassica rapa HOM05D006128 ORTHO05D007466 7.8e-06 55.1 48 66.7


User provided reference genes

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