Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold374G50235 Striga asiatica HOM05D008139 ORTHO05D009872 8.2e-55 216.9 112 100.0
SGA_v2.0_scaffold48G18067 Striga asiatica HOM05D008139 ORTHO05D009872 2.6e-21 105.5 93 58.1
Migut.N00505 Erythranthe guttata HOM05D008139 ORTHO05D009872 2.2e-20 102.4 103 54.4
SalBow8G2406 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.6e-18 96.3 109 52.3
SalBow8G2479 Salvia bowleyana HOM05D008139 ORTHO05D009872 1.6e-18 96.3 109 52.3
Nitab4.5_0000790g0110 Nicotiana tabacum HOM05D008139 ORTHO05D009872 2.3e-17 92.4 106 43.4
CAN.G1126.30 Capsicum annuum HOM05D008139 ORTHO05D009872 3.0e-17 92.0 78 50.0
Peaxi162Scf00057g00045 Petunia axillaris HOM05D008139 ORTHO05D009872 4.0e-17 91.7 78 51.3
Nitab4.5_0000110g0510 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.5e-16 89.7 82 47.6
CAN.G1139.6 Capsicum annuum HOM05D008139 ORTHO05D009872 4.4e-16 88.2 81 50.6
Hma1.2p1_0249F.1_g102430 Hydrangea macrophylla HOM05D008139 ORTHO05D009872 2.2e-15 85.9 82 50.0
Solyc04g080070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 2.8e-15 85.5 82 43.9
DCAR_019772 Daucus carota HOM05D008139 ORTHO05D009872 3.7e-15 85.1 100 53.0
Nitab4.5_0003246g0060 Nicotiana tabacum HOM05D008139 ORTHO05D009872 3.7e-15 85.1 111 41.4
Sopen04g033660 Solanum pennellii HOM05D008139 ORTHO05D009872 3.7e-15 85.1 82 43.9
Migut.C00700 Erythranthe guttata HOM05D008139 ORTHO05D009872 6.3e-15 84.3 78 50.0
PGSC0003DMG400005169 Solanum tuberosum HOM05D008139 ORTHO05D009872 6.3e-15 84.3 82 43.9
Gohir.D11G168166 Gossypium hirsutum HOM05D008139 ORTHO05D009872 8.2e-15 84.0 96 45.8
Gorai.007G179600 Gossypium raimondii HOM05D008139 ORTHO05D009872 8.2e-15 84.0 96 45.8
Nitab4.5_0002296g0050 Nicotiana tabacum HOM05D008139 ORTHO05D009872 1.1e-14 83.6 72 48.6
Cc10_g03180 Coffea canephora HOM05D008139 ORTHO05D009872 1.8e-14 82.8 76 52.6
Gohir.A11G161900 Gossypium hirsutum HOM05D008139 ORTHO05D009872 3.1e-14 82.0 84 46.4
Phvul.011G105800 Phaseolus vulgaris HOM05D008139 ORTHO05D009872 5.3e-14 81.3 87 43.7
Ciclev10017826m.g Citrus clementina HOM05D008139 ORTHO05D009872 7.0e-14 80.9 79 48.1
PGSC0003DMG400045933 Solanum tuberosum HOM05D008139 ORTHO05D009872 2.0e-13 79.3 82 45.1
Rhsim06G0158900 Rhododendron simsii HOM05D008139 ORTHO05D009872 3.5e-13 78.6 104 46.2
CSS0007440 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 7.7e-13 77.4 78 50.0
Thecc.04G120400 Theobroma cacao HOM05D008139 ORTHO05D009872 7.7e-13 77.4 77 49.4
TWI36G0135 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 1.0e-12 77.0 82 50.0
TAR626G0598 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.3e-12 76.6 78 50.0
RcHm_v2.0_Chr2g0126901 Rosa chinensis HOM05D008139 ORTHO05D009872 1.7e-12 76.3 81 49.4
COL.COLO4_15724 Corchorus olitorius HOM05D008139 ORTHO05D009872 2.2e-12 75.9 84 42.9
Nn1g07030 Nelumbo nucifera HOM05D008139 ORTHO05D009872 2.9e-12 75.5 81 45.7
Eucgr.A01721 Eucalyptus grandis HOM05D008139 ORTHO05D009872 5.0e-12 74.7 94 44.7
Potri.017G037500 Populus trichocarpa HOM05D008139 ORTHO05D009872 5.0e-12 74.7 87 43.7
FAN02G4280 Fragaria x ananassa HOM05D008139 ORTHO05D009872 6.5e-12 74.3 81 46.9
Manes.13G103000 Manihot esculenta HOM05D008139 ORTHO05D009872 6.5e-12 74.3 79 48.1
Lsat_1_v5_gn_8_128280 Lactuca sativa HOM05D008139 ORTHO05D009872 1.1e-11 73.6 76 47.4
TAR626G0589 Trochodendron aralioides HOM05D008139 ORTHO05D009872 1.1e-11 73.6 78 48.7
CSS0007820 Camellia sinensis var. sinensis HOM05D008139 ORTHO05D009872 1.5e-11 73.2 80 47.5
ClCG02G001810 Citrullus lanatus HOM05D008139 ORTHO05D009872 1.5e-11 73.2 79 46.8
Lalb_Chr03g0028851 Lupinus albus HOM05D008139 ORTHO05D009872 1.5e-11 73.2 83 44.6
Prupe.3G131300 Prunus persica HOM05D008139 ORTHO05D009872 1.5e-11 73.2 81 46.9
Sabra17G0024400 Salix brachista HOM05D008139 ORTHO05D009872 1.5e-11 73.2 88 43.2
TWI75G0563 Tripterygium wilfordii HOM05D008139 ORTHO05D009872 1.5e-11 73.2 85 47.1
Cfa014432 Carpinus fangiana HOM05D008139 ORTHO05D009872 1.9e-11 72.8 79 46.8
Dinv02745 Davidia involucrata HOM05D008139 ORTHO05D009872 1.9e-11 72.8 93 44.1
Sed0019249 Sechium edule HOM05D008139 ORTHO05D009872 1.9e-11 72.8 79 48.1
Potri.007G122500 Populus trichocarpa HOM05D008139 ORTHO05D009872 2.5e-11 72.4 79 46.8
Atru.chr6.3155 Acer truncatum HOM05D008139 ORTHO05D009872 3.2e-11 72.0 82 42.7
Atru.chr6.3157 Acer truncatum HOM05D008139 ORTHO05D009872 5.5e-11 71.2 86 45.3
CiPaw.04G117200 Carya illinoinensis HOM05D008139 ORTHO05D009872 5.5e-11 71.2 82 50.0
Duzib133G0708 Durio zibethinus HOM05D008139 ORTHO05D009872 5.5e-11 71.2 95 42.1
Solyc12g089070.1 Solanum lycopersicum HOM05D008139 ORTHO05D009872 5.5e-11 71.2 104 38.5
Lj3g0004995 Lotus japonicus HOM05D008139 ORTHO05D009872 9.4e-11 70.5 83 43.4
Medtr4g046720 Medicago truncatula HOM05D008139 ORTHO05D009872 9.4e-11 70.5 83 45.8
MELO3C018806.2 Cucumis melo HOM05D008139 ORTHO05D009872 1.2e-10 70.1 84 45.2
Aqoxy4G01991 Aquilegia oxysepala HOM05D008139 ORTHO05D009872 1.6e-10 69.7 82 37.8
MD07G1098300 Malus domestica HOM05D008139 ORTHO05D009872 2.1e-10 69.3 84 45.2
CsaV3_7G003730 Cucumis sativus L. HOM05D008139 ORTHO05D009872 2.7e-10 68.9 82 45.1
Glyma.12G100900 Glycine max HOM05D008139 ORTHO05D009872 2.7e-10 68.9 79 41.8
unitig_46.g17928 Utricularia gibba HOM05D008139 ORTHO05D009872 2.7e-10 68.9 108 38.0
TPR.G19049 Trifolium pratense HOM05D008139 ORTHO05D009872 6.1e-10 67.8 85 44.7
Lsat_1_v5_gn_5_103860 Lactuca sativa HOM05D008139 ORTHO05D009872 1.0e-09 67.0 96 38.5
PGR083G1842 Punica granatum HOM05D008139 ORTHO05D009872 2.3e-09 65.9 103 36.9
Prupe.2G122300 Prunus persica HOM05D008139 ORTHO05D009872 4.0e-09 65.1 84 41.7
CARHR126180 Cardamine hirsuta HOM05D011011 ORTHO05D009872 8.8e-09 63.9 82 36.6
QL08p033688 Quercus lobata HOM05D008139 ORTHO05D009872 1.2e-08 63.5 79 43.0
AT2G32360 Arabidopsis thaliana HOM05D011011 ORTHO05D009872 4.4e-08 61.6 82 36.6
Carub.0004s1371 Capsella rubella HOM05D011011 ORTHO05D009872 7.5e-08 60.8 82 34.1
AL4G27740 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 1.3e-07 60.1 82 34.1
Sp4g14730 Schrenkiella parvula HOM05D011011 ORTHO05D009872 1.7e-07 59.7 82 34.1
A03p18150 Brassica napus HOM05D011011 ORTHO05D009872 2.2e-07 59.3 116 32.8
BraA03t11075Z Brassica rapa HOM05D011011 ORTHO05D009872 2.2e-07 59.3 116 32.8
AL125U10020 Arabidopsis lyrata HOM05D011011 ORTHO05D009872 6.3e-07 57.8 82 32.9
BolC4t27657H Brassica oleracea HOM05D011011 ORTHO05D009872 1.8e-06 56.2 112 29.5
BcaB01g03982 Brassica carinata HOM05D011011 ORTHO05D009872 4.1e-06 55.1 116 29.3
BcaC02g07938 Brassica carinata HOM05D011011 ORTHO05D009872 4.1e-06 55.1 112 29.5
C04p61740 Brassica napus HOM05D011011 ORTHO05D009872 5.4e-06 54.7 112 30.4
THA.LOC104816105 Tarenaya hassleriana HOM05D011011 ORTHO05D009872 9.1e-06 53.9 114 29.8


User provided reference genes

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