Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 1.4e-127 459.5 224 100.0
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 4.2e-111 404.8 225 85.8
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 2.8e-107 392.1 225 83.6
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.6e-102 376.3 221 80.1
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.0e-101 373.6 221 79.2
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 2.3e-101 372.5 224 78.1
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 5.7e-100 367.9 217 78.8
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 9.8e-100 367.1 213 79.8
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 2.2e-99 365.9 219 78.5
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 6.3e-99 364.4 215 80.9
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 1.1e-98 363.6 218 78.4
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.8e-98 362.8 224 75.9
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 4.1e-98 361.7 218 78.0
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 4.1e-98 361.7 213 78.9
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 5.4e-98 361.3 211 79.6
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 7.0e-98 360.9 226 77.0
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 7.0e-98 360.9 226 76.5
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 1.6e-97 359.8 215 78.6
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 2.0e-97 359.4 212 80.7
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 4.5e-97 358.2 216 76.9
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 5.9e-97 357.8 212 80.2
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 1.0e-96 357.1 212 80.2
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.3e-96 356.7 211 80.1
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 1.3e-96 356.7 218 78.4
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 1.7e-96 356.3 213 79.3
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 2.2e-96 355.9 225 76.0
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 2.9e-96 355.5 216 78.7
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 2.9e-96 355.5 214 79.0
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 2.9e-96 355.5 222 75.7
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 5.0e-96 354.8 225 75.6
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 5.0e-96 354.8 214 75.7
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 6.5e-96 354.4 212 78.3
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 8.5e-96 354.0 227 75.3
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 8.5e-96 354.0 211 78.2
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.1e-95 353.6 206 78.6
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 1.5e-95 353.2 211 78.7
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.5e-95 353.2 207 77.3
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 1.5e-95 353.2 225 76.4
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 3.2e-95 352.1 203 80.8
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 3.2e-95 352.1 210 77.1
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 4.2e-95 351.7 215 76.3
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 5.5e-95 351.3 225 75.1
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 5.5e-95 351.3 212 75.0
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 7.2e-95 350.9 212 75.5
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 9.4e-95 350.5 217 77.4
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 9.4e-95 350.5 225 75.1
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 9.4e-95 350.5 212 77.8
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 2.1e-94 349.4 219 74.9
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 6.1e-94 347.8 215 75.8
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 6.1e-94 347.8 216 76.4
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 8.0e-94 347.4 217 75.1
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.0e-93 347.1 216 76.9
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 1.8e-93 346.3 224 72.8
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 4.0e-93 345.1 214 75.2
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 5.2e-93 344.7 214 74.8
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 5.2e-93 344.7 246 70.7
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 8.8e-93 344.0 218 74.3
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.0e-92 342.8 216 75.9
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 2.2e-91 339.3 217 73.3
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 3.7e-91 338.6 215 74.0
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 1.1e-90 337.0 220 74.1
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 3.1e-90 335.5 212 72.2
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 7.0e-90 334.3 213 73.7
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 9.2e-90 334.0 217 72.4
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 1.6e-89 333.2 269 64.3
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 2.7e-89 332.4 211 73.0
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 2.7e-89 332.4 211 73.0
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 2.7e-89 332.4 211 73.0
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 5.9e-89 331.3 214 73.4
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 5.9e-89 331.3 202 73.3
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 1.7e-88 329.7 212 73.6
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 1.7e-88 329.7 214 68.7
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 2.9e-88 328.9 221 69.7
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 5.6e-87 324.7 214 71.5
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 5.6e-87 324.7 214 71.5
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 9.5e-87 323.9 200 75.0
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 2.1e-86 322.8 216 72.2
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.8e-86 322.4 200 73.5
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 8.0e-86 320.9 222 68.9
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 1.2e-84 317.0 216 68.5
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 4.4e-84 315.1 183 80.3
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 4.9e-83 311.6 178 80.3
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 3.0e-80 302.4 178 77.0
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 1.7e-75 286.6 211 67.8
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 2.2e-75 286.2 180 72.2
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 2.9e-75 285.8 186 69.9
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 1.4e-74 283.5 172 73.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 1.4e-69 266.9 219 56.6
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 8.9e-69 264.2 150 80.0
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.2e-65 253.8 219 61.6
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 2.3e-64 249.6 171 68.4
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 1.1e-63 247.3 191 55.5
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 1.6e-62 243.4 211 61.6
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 8.9e-61 237.7 218 56.9
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 1.5e-60 236.9 140 80.7
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 3.4e-60 235.7 217 54.4
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 1.6e-54 216.9 130 75.4
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 1.6e-54 216.9 127 77.2
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.0e-48 197.6 106 86.8
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 2.8e-46 189.5 126 69.8
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.8e-45 186.8 115 76.5
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.4e-42 176.4 137 54.0
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 6.6e-40 168.3 218 36.7
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 4.9e-35 152.1 128 60.2
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 4.2e-34 149.1 128 57.8
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 1.6e-33 147.1 220 32.7
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 1.4e-29 134.0 79 74.7
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 3.8e-27 125.9 74 74.3
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.1e-26 124.4 89 57.3
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 2.5e-26 123.2 173 33.5
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 2.3e-24 116.7 85 64.7
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 1.2e-20 104.4 73 63.0
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 2.6e-20 103.2 65 73.8
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.4e-18 97.4 51 80.4
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 1.1e-15 87.8 71 54.9
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 8.5e-11 71.6 70 55.7
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 3.2e-10 69.7 58 63.8
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 1.8e-08 63.9 92 44.6


User provided reference genes

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