Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 0.0e+00 1660.6 872 100.0
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 0.0e+00 1374.0 880 82.6
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 0.0e+00 1165.6 884 73.8
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 0.0e+00 1115.5 889 71.7
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 4.2e-311 1071.2 885 67.3
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 4.5e-286 988.0 901 61.9
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.9e-285 985.3 909 62.6
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.6e-284 981.1 904 62.4
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 6.1e-283 977.6 904 62.2
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 3.7e-280 968.4 905 62.3
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.1e-279 966.8 879 63.8
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 2.7e-278 962.2 901 62.9
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.2e-275 953.4 900 61.8
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 8.6e-269 930.6 903 61.1
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.6e-262 909.8 902 59.5
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 6.6e-261 904.4 888 60.7
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 4.3e-260 901.7 903 60.0
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 7.3e-260 901.0 902 58.6
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 3.6e-259 898.7 902 58.5
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 1.1e-258 897.1 893 60.4
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 3.4e-257 892.1 902 59.4
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 2.9e-256 889.0 858 62.2
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 1.9e-255 886.3 906 59.6
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 1.2e-254 883.6 853 62.4
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 6.6e-253 877.9 903 59.5
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 2.8e-251 872.5 899 58.7
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.2e-249 867.1 895 59.7
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 4.4e-249 865.1 899 59.0
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 7.6e-249 864.4 802 64.5
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 7.6e-249 864.4 902 58.9
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.2e-246 857.1 903 58.6
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.6e-246 856.7 897 56.9
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 7.8e-246 854.4 899 58.8
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.7e-245 853.2 909 57.8
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.5e-244 850.1 909 57.4
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.8e-243 845.1 897 57.1
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.4e-242 843.6 897 57.0
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-241 840.1 897 59.6
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 2.0e-241 839.7 895 58.0
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.3e-240 837.0 909 55.9
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.9e-240 835.9 895 57.8
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 5.4e-239 831.6 899 57.8
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.6e-238 830.1 897 57.2
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 6.7e-237 824.7 898 56.0
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.8e-234 816.6 899 56.7
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-233 813.5 895 56.9
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 3.4e-233 812.4 877 59.3
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 5.8e-233 811.6 880 57.2
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 9.9e-233 810.8 864 57.8
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 1.9e-231 806.6 834 60.3
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.4e-231 806.2 902 54.7
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.3e-229 800.4 893 54.6
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 5.1e-229 798.5 903 56.0
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 1.5e-228 797.0 895 55.0
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 1.9e-228 796.6 896 54.8
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 6.2e-227 791.6 879 58.6
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.4e-226 790.4 892 56.1
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 4.0e-226 788.9 861 56.1
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 9.0e-226 787.7 879 58.6
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 1.0e-224 784.3 914 53.4
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.3e-224 783.9 891 53.2
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.5e-223 779.6 893 56.2
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 3.2e-223 779.2 917 54.7
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 4.2e-223 778.9 887 57.4
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 9.3e-223 777.7 917 54.6
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.7e-222 776.2 892 56.8
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 7.9e-222 774.6 892 56.7
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 7.9e-222 774.6 862 58.7
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 2.3e-221 773.1 912 52.3
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.9e-220 770.0 915 53.9
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.5e-220 769.6 908 52.5
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 9.7e-220 767.7 893 56.6
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.3e-219 767.3 798 59.1
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 8.2e-219 764.6 844 58.6
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 4.1e-218 762.3 905 54.0
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 5.3e-218 761.9 902 55.0
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 2.0e-217 760.0 919 54.5
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 4.5e-217 758.8 892 54.4
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 5.9e-217 758.4 898 54.3
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.3e-216 757.3 904 54.5
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.2e-214 750.7 904 54.4
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.1e-214 750.0 858 56.6
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 1.8e-213 746.9 911 52.4
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 2.3e-213 746.5 793 57.8
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 2.3e-213 746.5 793 57.8
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.3e-213 746.5 903 54.0
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 3.3e-212 742.7 907 52.9
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 5.7e-212 741.9 904 54.5
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.3e-211 740.7 885 54.0
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.8e-210 736.9 911 51.2
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 9.1e-210 734.6 895 52.8
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 2.0e-209 733.4 903 53.9
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 8.5e-208 728.0 902 53.8
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 7.2e-207 724.9 904 52.9
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.5e-204 717.2 854 53.7
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.5e-204 717.2 840 52.9
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.7e-203 713.8 845 54.2
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 2.2e-203 713.4 890 53.0
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 2.2e-203 713.4 857 55.2
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 3.7e-203 712.6 899 52.2
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 3.7e-203 712.6 901 50.4
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 4.1e-202 709.1 899 52.2
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.2e-201 707.6 869 55.0
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.5e-201 705.7 893 49.8
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 2.2e-200 703.4 898 52.2
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 2.9e-200 703.0 897 52.6
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 2.9e-200 703.0 859 53.4
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 8.5e-200 701.4 897 52.4
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 1.1e-199 701.0 901 52.6
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.6e-198 697.2 850 52.9
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.1e-194 684.5 859 53.8
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 9.4e-191 671.4 886 51.7
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 9.7e-188 661.4 889 49.9
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 5.9e-185 652.1 907 51.0
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.7e-182 643.3 894 50.3
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.8e-181 638.6 907 50.3
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 7.5e-180 635.2 867 51.8
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.7e-179 634.0 894 48.3
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 4.8e-179 632.5 891 47.6
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.8e-174 616.7 867 49.7
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.2e-169 601.3 872 47.6
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.2e-169 601.3 842 49.6
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.9e-167 594.0 775 49.9
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 3.3e-167 593.2 902 47.9
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.6e-166 590.9 903 47.8
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 8.9e-165 585.1 800 51.5
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 7.5e-164 582.0 847 49.0
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 7.5e-164 582.0 725 51.3
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 2.2e-163 580.5 867 48.1
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 4.6e-161 572.8 866 49.0
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 7.8e-161 572.0 902 45.6
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 3.9e-160 569.7 859 48.4
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 1.5e-159 567.8 862 48.6
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 3.3e-159 566.6 840 48.3
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 5.2e-157 559.3 846 48.2
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 6.8e-157 558.9 909 45.7
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 6.4e-155 552.4 733 51.4
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 1.1e-154 551.6 879 47.4
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.4e-154 550.4 885 47.0
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.3e-152 544.7 886 46.3
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 1.6e-150 537.7 909 45.7
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 7.3e-143 512.3 913 45.5
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 9.5e-143 511.9 770 47.4
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 3.1e-141 506.9 916 45.3
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 3.4e-140 503.4 896 44.4
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 6.2e-134 482.6 748 47.9
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 1.3e-131 474.9 842 45.1
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 4.8e-126 456.4 837 42.5
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 6.2e-126 456.1 788 45.6
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 3.2e-122 443.7 760 44.9
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 6.9e-117 426.0 728 46.3
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 6.0e-113 412.9 449 56.6
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.1e-109 402.1 914 38.7
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.8e-109 401.4 878 39.9
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 3.5e-105 387.1 907 37.6
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 1.5e-103 381.7 911 38.1
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.3e-102 378.6 632 47.9
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.8e-102 377.5 890 38.2
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.8e-102 377.5 395 60.8
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 2.6e-100 370.9 889 37.2
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.1e-97 361.3 905 37.7
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 2.0e-95 354.8 910 37.8
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 6.1e-89 333.2 794 38.2
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 5.7e-87 326.6 358 53.1
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.5e-79 302.0 991 35.2
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.8e-77 295.0 484 44.4
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 1.2e-71 275.8 830 36.1
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 1.7e-67 261.9 379 48.5
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 6.1e-65 253.4 464 45.5
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 8.8e-64 249.6 356 45.8
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.0e-59 236.1 299 47.2
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.8e-56 225.3 300 47.0
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 6.8e-56 223.4 257 52.1
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 2.9e-51 208.0 358 39.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 2.9e-51 208.0 330 42.1
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 3.5e-44 184.5 175 55.4
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.3e-42 177.6 712 29.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 3.6e-41 174.5 97 91.8
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 1.8e-40 172.2 260 56.9
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.0e-39 168.7 180 55.6
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.5e-31 142.5 227 40.5
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.4e-31 141.4 309 35.9
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 9.6e-18 96.7 142 41.5
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 9.9e-07 60.1 40 67.5
SEGI_26240 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.7e-06 59.3 488 23.8


User provided reference genes

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