Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold370G50119 Striga asiatica HOM05D006432 ORTHO05D008257 9.1e-56 219.9 106 100.0
SGA_v2.0_scaffold43G16214 Striga asiatica HOM05D006432 ORTHO05D008257 8.0e-52 206.8 105 94.3
Cpa.g.sc44.36 Carica papaya HOM05D006432 ORTHO05D008257 2.9e-46 188.3 105 83.8
Zm00001eb114860 Zea mays HOM05D006432 ORTHO05D008257 3.8e-46 188.0 105 82.9
Sc13g0005860 Simmondsia chinensis HOM05D006432 ORTHO05D008257 2.1e-44 182.2 105 80.0
Thecc.04G259000 Theobroma cacao HOM05D006432 ORTHO05D008257 2.1e-44 182.2 105 80.0
MELO3C006407.2 Cucumis melo HOM05D006432 ORTHO05D008257 2.8e-44 181.8 105 80.0
Os11g0595200 Oryza sativa ssp. japonica HOM05D006432 ORTHO05D008257 2.8e-44 181.8 105 79.0
GSVIVG01027851001 Vitis vinifera HOM05D006432 ORTHO05D008257 2.8e-44 181.8 105 78.1
Actinidia11356 Actinidia chinensis HOM05D006432 ORTHO05D008257 3.6e-44 181.4 105 80.0
Peaxi162Scf00392g00732 Petunia axillaris HOM05D006432 ORTHO05D008257 3.6e-44 181.4 105 81.0
Glyma.20G207100 Glycine max HOM05D006432 ORTHO05D008257 6.1e-44 180.6 105 80.0
ClCG05G004210 Citrullus lanatus HOM05D006432 ORTHO05D008257 8.0e-44 180.3 105 80.0
Dinv27072 Davidia involucrata HOM05D006432 ORTHO05D008257 1.4e-43 179.5 105 79.0
Actinidia39914 Actinidia chinensis HOM05D006432 ORTHO05D008257 1.8e-43 179.1 105 78.1
Sed0005439 Sechium edule HOM05D006432 ORTHO05D008257 2.3e-43 178.7 105 79.0
CAN.G220.38 Capsicum annuum HOM05D006432 ORTHO05D008257 3.0e-43 178.3 105 78.1
CsaV3_3G011940 Cucumis sativus L. HOM05D006432 ORTHO05D008257 3.0e-43 178.3 105 79.0
Solyc09g090330.3 Solanum lycopersicum HOM05D006432 ORTHO05D008257 3.0e-43 178.3 105 78.1
Glyma.10G182900 Glycine max HOM05D006432 ORTHO05D008257 4.0e-43 177.9 105 79.0
PGSC0003DMG400017164 Solanum tuberosum HOM05D006432 ORTHO05D008257 5.2e-43 177.6 105 77.1
Potri.008G169100 Populus trichocarpa HOM05D006432 ORTHO05D008257 6.8e-43 177.2 105 79.0
Sopen09g033230 Solanum pennellii HOM05D006432 ORTHO05D008257 6.8e-43 177.2 105 77.1
arahy.Tifrunner.gnm1.ann1.508QQU Arachis hypogaea HOM05D006432 ORTHO05D008257 1.5e-42 176.0 105 75.2
arahy.Tifrunner.gnm1.ann1.X8C4EZ Arachis hypogaea HOM05D006432 ORTHO05D008257 2.0e-42 175.6 105 74.3
COL.COLO4_15916 Corchorus olitorius HOM05D006432 ORTHO05D008257 2.6e-42 175.3 105 78.1
Manes.15G043100 Manihot esculenta HOM05D006432 ORTHO05D008257 2.6e-42 175.3 105 77.1
Hma1.2p1_0385F.1_g141240 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 3.4e-42 174.9 105 76.2
Nitab4.5_0000044g0560 Nicotiana tabacum HOM05D006432 ORTHO05D008257 3.4e-42 174.9 105 76.2
Migut.N00285 Erythranthe guttata HOM05D006432 ORTHO05D008257 4.4e-42 174.5 105 76.2
Nitab4.5_0000596g0040 Nicotiana tabacum HOM05D006432 ORTHO05D008257 4.4e-42 174.5 105 77.1
Ah.13g072590 Amaranthus hybridus HOM05D006432 ORTHO05D008257 7.5e-42 173.7 105 76.2
Cc03_g05780 Coffea canephora HOM05D006432 ORTHO05D008257 7.5e-42 173.7 105 78.1
Haze_11417 Corylus avellana HOM05D006432 ORTHO05D008257 7.5e-42 173.7 105 77.1
Sabra08G0128900 Salix brachista HOM05D006432 ORTHO05D008257 7.5e-42 173.7 105 76.2
Cfa014742 Carpinus fangiana HOM05D006432 ORTHO05D008257 9.8e-42 173.3 105 75.2
QL06p019206 Quercus lobata HOM05D006432 ORTHO05D008257 9.8e-42 173.3 105 76.2
VMungo0720G1276 Vigna mungo HOM05D006432 ORTHO05D008257 9.8e-42 173.3 105 78.1
CSS0006599 Camellia sinensis var. sinensis HOM05D006432 ORTHO05D008257 1.3e-41 172.9 105 74.3
Thhalv10021276m.g Eutrema salsugineum HOM05D006432 ORTHO05D008257 1.7e-41 172.6 105 73.3
PGR031G2997 Punica granatum HOM05D006432 ORTHO05D008257 1.7e-41 172.6 105 77.1
TWI73G0471 Tripterygium wilfordii HOM05D006432 ORTHO05D008257 2.2e-41 172.2 105 75.2
A07p09040 Brassica napus HOM05D006432 ORTHO05D008257 2.8e-41 171.8 105 73.3
AUR62015546 Chenopodium quinoa HOM05D006432 ORTHO05D008257 2.8e-41 171.8 105 75.2
AL3G38060 Arabidopsis lyrata HOM05D006432 ORTHO05D008257 3.7e-41 171.4 105 74.3
Duzib052G0458 Durio zibethinus HOM05D006432 ORTHO05D008257 3.7e-41 171.4 110 73.6
Rhsim02G0041500 Rhododendron simsii HOM05D006432 ORTHO05D008257 3.7e-41 171.4 105 74.3
HPP92_005402 Vanilla planifolia HOM05D006432 ORTHO05D008257 3.7e-41 171.4 105 76.2
BolC7t41898H Brassica oleracea HOM05D006432 ORTHO05D008257 4.9e-41 171.0 105 72.4
BraA07t28698Z Brassica rapa HOM05D006432 ORTHO05D008257 4.9e-41 171.0 105 72.4
Gohir.D09G229900 Gossypium hirsutum HOM05D006432 ORTHO05D008257 6.3e-41 170.6 105 73.3
Gorai.006G252600 Gossypium raimondii HOM05D006432 ORTHO05D008257 6.3e-41 170.6 105 73.3
EL10Ac3g04982 Beta vulgaris HOM05D006432 ORTHO05D008257 8.3e-41 170.2 105 74.3
THA.LOC104804760 Tarenaya hassleriana HOM05D006432 ORTHO05D008257 8.3e-41 170.2 105 73.3
BcaC06g35517 Brassica carinata HOM05D006432 ORTHO05D008257 1.1e-40 169.9 105 71.4
Aa31LG8G9890 Aethionema arabicum HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 71.4
MSTRG.9882 Avicennia marina HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 77.1
CARHR099370 Cardamine hirsuta HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 72.4
AUR62002163 Chenopodium quinoa HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 74.3
Lj5g0003574 Lotus japonicus HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 75.2
MD16G1221800 Malus domestica HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 75.2
Psat6g122560 Pisum sativum HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 74.3
Sp3g21070 Schrenkiella parvula HOM05D006432 ORTHO05D008257 1.4e-40 169.5 105 72.4
AT3G23400 Arabidopsis thaliana HOM05D006432 ORTHO05D008257 1.8e-40 169.1 105 73.3
Carub.0003s2366 Capsella rubella HOM05D006432 ORTHO05D008257 1.8e-40 169.1 105 73.3
Ciclev10007095m.g Citrus clementina HOM05D006432 ORTHO05D008257 1.8e-40 169.1 105 74.3
Gohir.A09G228800 Gossypium hirsutum HOM05D006432 ORTHO05D008257 1.8e-40 169.1 105 72.4
FAN17G1327 Fragaria x ananassa HOM05D006432 ORTHO05D008257 3.1e-40 168.3 105 73.3
FAN22G0893 Fragaria x ananassa HOM05D006432 ORTHO05D008257 3.1e-40 168.3 105 73.3
Hund11907 Selenicereus undatus HOM05D006432 ORTHO05D008257 3.1e-40 168.3 105 73.3
Atru.chr4.2005 Acer truncatum HOM05D006432 ORTHO05D008257 4.1e-40 167.9 107 74.8
C07p14010 Brassica napus HOM05D006432 ORTHO05D008257 4.1e-40 167.9 105 71.4
MBI07_g31085_MAGBIO Magnolia biondii HOM05D006432 ORTHO05D008257 4.1e-40 167.9 105 72.4
Oeu059409.1 Olea europaea HOM05D006432 ORTHO05D008257 4.1e-40 167.9 105 76.2
Eucgr.H00144 Eucalyptus grandis HOM05D006432 ORTHO05D008257 5.4e-40 167.5 105 76.2
Medtr1g075660 Medicago truncatula HOM05D006432 ORTHO05D008257 7.0e-40 167.2 105 71.4
TPR.G10084 Trifolium pratense HOM05D006432 ORTHO05D008257 7.0e-40 167.2 106 71.7
FAN12G0128 Fragaria x ananassa HOM05D006432 ORTHO05D008257 9.2e-40 166.8 105 72.4
HanXRQChr14g0434951 Helianthus annuus HOM05D006432 ORTHO05D008257 1.2e-39 166.4 105 72.4
Lalb_Chr21g0312161 Lupinus albus HOM05D006432 ORTHO05D008257 1.6e-39 166.0 105 73.3
Lalb_Chr06g0169201 Lupinus albus HOM05D006432 ORTHO05D008257 2.0e-39 165.6 106 73.6
PSO478G2331 Papaver somniferum HOM05D006432 ORTHO05D008257 2.0e-39 165.6 105 73.3
vmacro15458 Vaccinium macrocarpon HOM05D006432 ORTHO05D008257 2.0e-39 165.6 105 74.3
RcHm_v2.0_Chr4g0394281 Rosa chinensis HOM05D006432 ORTHO05D008257 2.7e-39 165.2 105 71.4
ATR0582G319 Amborella trichopoda HOM05D006432 ORTHO05D008257 4.5e-39 164.5 105 72.4
Aqoxy5G00185 Aquilegia oxysepala HOM05D006432 ORTHO05D008257 4.5e-39 164.5 105 71.4
Ca_09849_v3 Cicer arietinum L. HOM05D006432 ORTHO05D008257 4.5e-39 164.5 105 71.4
CDE04G3487 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 5.9e-39 164.1 105 72.4
CANSAT78G0744 Cannabis sativa HOM05D006432 ORTHO05D008257 7.8e-39 163.7 107 71.0
Lsat_1_v5_gn_2_40021 Lactuca sativa HOM05D006432 ORTHO05D008257 7.8e-39 163.7 105 72.4
CiPaw.01G181700 Carya illinoinensis HOM05D006432 ORTHO05D008257 1.0e-38 163.3 105 73.3
Prupe.1G042200 Prunus persica HOM05D006432 ORTHO05D008257 1.0e-38 163.3 105 73.3
PSO017G5682 Papaver somniferum HOM05D006432 ORTHO05D008257 3.8e-38 161.4 105 70.5
Lj3A686T58 Lonicera japonica HOM05D006432 ORTHO05D008257 1.1e-37 159.8 110 68.2
Oeu055241.1 Olea europaea HOM05D000508 ORTHO05D000371 2.1e-36 155.6 88 81.8
ECA240G3223 Erigeron canadensis HOM05D002023 ORTHO05D002049 8.0e-36 153.7 103 68.9
CDE03G0089 Ceratophyllum demersum HOM05D006432 ORTHO05D008257 8.3e-33 143.7 105 64.8
unitig_0.g1188 Utricularia gibba HOM05D006432 ORTHO05D008257 4.1e-32 141.4 109 62.4
Pp3c11_17240 Physcomitrium patens HOM05D006432 ORTHO05D008257 3.5e-31 138.3 105 61.0
Nn3g19719 Nelumbo nucifera HOM05D006432 ORTHO05D008257 4.6e-31 137.9 105 65.7
Hma1.2p1_0385F.1_g141230 Hydrangea macrophylla HOM05D006432 ORTHO05D008257 7.3e-29 130.6 82 72.0
AagrBONN_evm.TU.Sc2ySwM_228.2035 Anthoceros agrestis HOM05D006432 ORTHO05D008257 2.8e-28 128.6 108 57.4
BcaB05g22938 Brassica carinata HOM05D006432 ORTHO05D008257 8.9e-27 123.6 77 70.1
SEGI_38471 Sequoiadendron giganteum HOM05D006432 ORTHO05D008257 8.9e-27 123.6 105 53.3
SMO141G0176 Selaginella moellendorffii HOM05D006432 ORTHO05D008257 1.2e-26 123.2 105 60.0
BcaB02g08931 Brassica carinata HOM05D006432 ORTHO05D008257 1.9e-24 115.9 98 56.1
BcaB04g17238 Brassica carinata HOM05D006432 ORTHO05D008257 4.1e-24 114.8 77 66.2
MD13G1216500 Malus domestica HOM05D006432 ORTHO05D008257 5.4e-24 114.4 105 53.3
BcaB01g01688 Brassica carinata HOM05D006432 ORTHO05D008257 5.0e-22 107.8 73 65.8
Mapoly0012s0134 Marchantia polymorpha HOM05D006432 ORTHO05D008257 7.3e-21 104.0 105 49.5
BcaB07g33946 Brassica carinata HOM05D006432 ORTHO05D008257 6.8e-19 97.4 62 69.4
CBR_g30839 Chara braunii HOM05D006432 ORTHO05D008257 1.9e-16 89.4 116 39.7
Nn1g02871 Nelumbo nucifera HOM05D006432 ORTHO05D008257 1.7e-14 82.8 53 67.9
Cre02.g143667 Chlamydomonas reinhardtii HOM05D006432 ORTHO05D008257 1.8e-11 72.8 79 51.9


User provided reference genes

Program Settings