Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold370G50114 Striga asiatica HOM05D005188 ORTHO05D006153 3.1e-84 315.1 160 100.0
Migut.H00702 Erythranthe guttata HOM05D005188 ORTHO05D006153 2.9e-69 265.4 169 82.8
MSTRG.2649 Avicennia marina HOM05D005188 ORTHO05D006153 8.3e-69 263.8 167 83.2
SalBow1G2748 Salvia bowleyana HOM05D005188 ORTHO05D006153 2.0e-67 259.2 161 83.2
Oeu037826.1 Olea europaea HOM05D005188 ORTHO05D006153 2.3e-66 255.8 167 79.0
TWI75G0084 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 2.5e-65 252.3 166 78.9
TWI79G1553 Tripterygium wilfordii HOM05D005188 ORTHO05D006153 7.3e-65 250.8 166 78.9
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.2e-64 250.0 172 75.6
Gohir.A11G226800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.8e-64 248.8 174 75.3
Gohir.D11G230800 Gossypium hirsutum HOM05D005188 ORTHO05D006153 2.8e-64 248.8 174 75.3
Potri.005G063300 Populus trichocarpa HOM05D005188 ORTHO05D006153 1.8e-63 246.1 173 75.7
Sabra05G0052500 Salix brachista HOM05D005188 ORTHO05D006153 1.8e-63 246.1 173 76.3
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.3e-63 245.7 172 74.4
unitig_899.g14682 Utricularia gibba HOM05D005188 ORTHO05D006153 6.8e-63 244.2 165 76.4
Manes.12G156000 Manihot esculenta HOM05D005188 ORTHO05D006153 8.9e-63 243.8 173 75.7
Thecc.01G132900 Theobroma cacao HOM05D005188 ORTHO05D006153 8.9e-63 243.8 173 74.6
Gorai.003G066700 Gossypium raimondii HOM05D005188 ORTHO05D006153 3.4e-62 241.9 181 72.4
Potri.007G105900 Populus trichocarpa HOM05D005188 ORTHO05D006153 4.4e-62 241.5 173 75.1
CiPaw.03G121400 Carya illinoinensis HOM05D005188 ORTHO05D006153 7.5e-62 240.7 176 75.0
Cfa002897 Carpinus fangiana HOM05D005188 ORTHO05D006153 9.8e-62 240.4 176 73.9
QL02p001672 Quercus lobata HOM05D005188 ORTHO05D006153 9.8e-62 240.4 173 75.1
COL.COLO4_35748 Corchorus olitorius HOM05D005188 ORTHO05D006153 1.7e-61 239.6 172 74.4
Hma1.2p1_0476F.1_g160790 Hydrangea macrophylla HOM05D005188 ORTHO05D006153 2.2e-61 239.2 172 74.4
MD15G1441800 Malus domestica HOM05D005188 ORTHO05D006153 2.9e-61 238.8 170 75.3
CAN.G792.16 Capsicum annuum HOM05D005188 ORTHO05D006153 6.4e-61 237.7 167 77.2
ClCG01G015380 Citrullus lanatus HOM05D005188 ORTHO05D006153 1.4e-60 236.5 172 73.8
Haze_25240 Corylus avellana HOM05D005188 ORTHO05D006153 1.4e-60 236.5 176 72.7
CANSAT01G0911 Cannabis sativa HOM05D005188 ORTHO05D006153 1.9e-60 236.1 170 74.7
MBI06_g39404_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 2.4e-60 235.7 172 73.3
Ah.02g121530 Amaranthus hybridus HOM05D005188 ORTHO05D006153 3.2e-60 235.3 167 72.5
MELO3C008060.2 Cucumis melo HOM05D005188 ORTHO05D006153 3.2e-60 235.3 172 73.3
CsaV3_6G041600 Cucumis sativus L. HOM05D005188 ORTHO05D006153 4.1e-60 235.0 172 73.3
CiPaw.04G081900 Carya illinoinensis HOM05D005188 ORTHO05D006153 5.4e-60 234.6 177 72.3
TAR381G0300 Trochodendron aralioides HOM05D005188 ORTHO05D006153 5.4e-60 234.6 175 72.6
Dinv24366 Davidia involucrata HOM05D005188 ORTHO05D006153 7.0e-60 234.2 171 73.7
Cpa.g.sc3.345 Carica papaya HOM05D005188 ORTHO05D006153 9.2e-60 233.8 174 70.7
Medtr3g095540 Medicago truncatula HOM05D005188 ORTHO05D006153 1.6e-59 233.0 173 71.1
TPR.G18740 Trifolium pratense HOM05D005188 ORTHO05D006153 1.6e-59 233.0 174 71.3
Lj1g0024625 Lotus japonicus HOM05D005188 ORTHO05D006153 2.7e-59 232.3 168 73.2
Lalb_Chr13g0296451 Lupinus albus HOM05D005188 ORTHO05D006153 3.5e-59 231.9 176 73.3
MD01G1004300 Malus domestica HOM05D005188 ORTHO05D006153 3.5e-59 231.9 170 72.4
Solyc08g013670.3 Solanum lycopersicum HOM05D005188 ORTHO05D006153 4.6e-59 231.5 166 74.7
CSS0010064 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 6.0e-59 231.1 175 72.6
CSS0045275 Camellia sinensis var. sinensis HOM05D005188 ORTHO05D006153 6.0e-59 231.1 175 72.6
Phvul.002G269400 Phaseolus vulgaris HOM05D005188 ORTHO05D006153 6.0e-59 231.1 171 70.2
Psat5g063680 Pisum sativum HOM05D005188 ORTHO05D006153 1.0e-58 230.3 171 70.2
Lj4g0001203 Lotus japonicus HOM05D005188 ORTHO05D006153 1.3e-58 229.9 165 75.2
VMungo0251G2948 Vigna mungo HOM05D005188 ORTHO05D006153 1.3e-58 229.9 172 70.9
Cc10_g12590 Coffea canephora HOM05D005188 ORTHO05D006153 2.3e-58 229.2 170 70.0
CDE08G0648 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 3.0e-58 228.8 172 69.2
Glyma.04G215800 Glycine max HOM05D005188 ORTHO05D006153 3.0e-58 228.8 168 70.8
arahy.Tifrunner.gnm1.ann1.DJM1RY Arachis hypogaea HOM05D005188 ORTHO05D006153 3.9e-58 228.4 175 73.7
Sopen08g004510 Solanum pennellii HOM05D005188 ORTHO05D006153 3.9e-58 228.4 166 77.1
Ciclev10002687m.g Citrus clementina HOM05D005188 ORTHO05D006153 5.1e-58 228.0 171 70.8
Nn2g12180 Nelumbo nucifera HOM05D005188 ORTHO05D006153 5.1e-58 228.0 174 71.3
Ca_16917_v3 Cicer arietinum L. HOM05D005188 ORTHO05D006153 6.6e-58 227.6 171 70.8
arahy.Tifrunner.gnm1.ann1.V5WWJ8 Arachis hypogaea HOM05D005188 ORTHO05D006153 8.6e-58 227.3 175 72.6
AUR62017881 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.1e-57 226.9 169 71.6
PGSC0003DMG400005805 Solanum tuberosum HOM05D005188 ORTHO05D006153 1.1e-57 226.9 174 73.0
Hund23270 Selenicereus undatus HOM05D005188 ORTHO05D006153 1.9e-57 226.1 176 69.9
Actinidia06616 Actinidia chinensis HOM05D005188 ORTHO05D006153 3.3e-57 225.3 172 70.3
Prupe.4G271200 Prunus persica HOM05D005188 ORTHO05D006153 3.3e-57 225.3 173 74.6
Aqoxy5G02315 Aquilegia oxysepala HOM05D005188 ORTHO05D006153 5.6e-57 224.6 172 70.3
PGR008G0006 Punica granatum HOM05D005188 ORTHO05D006153 5.6e-57 224.6 167 71.9
PGR119G0239 Punica granatum HOM05D005188 ORTHO05D006153 5.6e-57 224.6 167 71.9
Lsat_1_v5_gn_1_10061 Lactuca sativa HOM05D005188 ORTHO05D006153 7.3e-57 224.2 171 70.8
Lj2A607T35 Lonicera japonica HOM05D005188 ORTHO05D006153 7.3e-57 224.2 170 69.4
Peaxi162Scf01257g00019 Petunia axillaris HOM05D005188 ORTHO05D006153 9.5e-57 223.8 180 67.2
HanXRQChr04g0107551 Helianthus annuus HOM05D005188 ORTHO05D006153 1.2e-56 223.4 166 72.3
Glyma.06G150300 Glycine max HOM05D005188 ORTHO05D006153 1.6e-56 223.0 167 68.9
CARHR277950 Cardamine hirsuta HOM05D005188 ORTHO05D006153 2.1e-56 222.6 171 69.0
Sp2g27110 Schrenkiella parvula HOM05D005188 ORTHO05D006153 2.8e-56 222.2 171 68.4
MBI03_g42548_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 3.6e-56 221.9 171 69.6
Nitab4.5_0000673g0170 Nicotiana tabacum HOM05D005188 ORTHO05D006153 3.6e-56 221.9 169 74.6
Aa31LG1G17870 Aethionema arabicum HOM05D005188 ORTHO05D006153 6.2e-56 221.1 173 67.6
AL8G41300 Arabidopsis lyrata HOM05D005188 ORTHO05D006153 1.1e-55 220.3 172 68.0
Sabra07G0086700 Salix brachista HOM05D005188 ORTHO05D006153 1.1e-55 220.3 170 69.4
AT5G64040 Arabidopsis thaliana HOM05D005188 ORTHO05D006153 1.8e-55 219.5 172 67.4
FvH4_1g24360 Fragaria vesca HOM05D005188 ORTHO05D006153 1.8e-55 219.5 166 70.5
FAN19G1208 Fragaria x ananassa HOM05D005188 ORTHO05D006153 1.8e-55 219.5 166 70.5
BcaC01g02658 Brassica carinata HOM05D005188 ORTHO05D006153 2.3e-55 219.2 171 67.8
BcaC01g02659 Brassica carinata HOM05D005188 ORTHO05D006153 2.3e-55 219.2 171 67.8
Sed0019160 Sechium edule HOM05D005188 ORTHO05D006153 2.3e-55 219.2 174 70.7
Sed0010246 Sechium edule HOM05D005188 ORTHO05D006153 3.1e-55 218.8 170 71.2
C09p09640 Brassica napus HOM05D005188 ORTHO05D006153 6.8e-55 217.6 169 69.2
Carub.0008s2482 Capsella rubella HOM05D005188 ORTHO05D006153 1.2e-54 216.9 172 66.9
CDE02G4401 Ceratophyllum demersum HOM05D005188 ORTHO05D006153 1.2e-54 216.9 172 67.4
Thhalv10005005m.g Eutrema salsugineum HOM05D005188 ORTHO05D006153 1.5e-54 216.5 171 66.7
BcaB07g29717 Brassica carinata HOM05D005188 ORTHO05D006153 2.0e-54 216.1 170 67.6
FAN28G1395 Fragaria x ananassa HOM05D002517 ORTHO05D003040 2.6e-54 215.7 164 69.5
ATR0987G005 Amborella trichopoda HOM05D005188 ORTHO05D006153 3.4e-54 215.3 178 66.3
BcaB02g09793 Brassica carinata HOM05D005188 ORTHO05D006153 3.4e-54 215.3 171 69.0
A06p30750 Brassica napus HOM05D005188 ORTHO05D006153 1.3e-53 213.4 171 66.7
C02p63110 Brassica napus HOM05D005188 ORTHO05D006153 1.7e-53 213.0 170 67.1
BolC2t12383H Brassica oleracea HOM05D005188 ORTHO05D006153 1.7e-53 213.0 170 67.1
DCAR_001211 Daucus carota HOM05D005188 ORTHO05D006153 2.2e-53 212.6 171 69.0
RcHm_v2.0_Chr2g0120891 Rosa chinensis HOM05D005188 ORTHO05D006153 2.2e-53 212.6 166 68.1
BcaC03g18240 Brassica carinata HOM05D005188 ORTHO05D006153 2.9e-53 212.2 170 67.1
ECA247G1960 Erigeron canadensis HOM05D005188 ORTHO05D006153 2.9e-53 212.2 166 69.9
MBI06_g27435_MAGBIO Magnolia biondii HOM05D005188 ORTHO05D006153 4.9e-53 211.5 149 73.8
FAN26G2437 Fragaria x ananassa HOM05D002517 ORTHO05D006153 1.4e-52 209.9 166 69.3
BolC9t53875H Brassica oleracea HOM05D005188 ORTHO05D006153 2.4e-52 209.1 180 65.0
Atru.chr4.905 Acer truncatum HOM05D005188 ORTHO05D006153 3.2e-52 208.8 171 67.3
Rhsim10G0133700 Rhododendron simsii HOM05D005188 ORTHO05D006153 5.4e-52 208.0 173 66.5
vmacro12795 Vaccinium macrocarpon HOM05D005188 ORTHO05D006153 7.8e-51 204.1 177 66.1
GSVIVG01026478001 Vitis vinifera HOM05D005188 ORTHO05D006153 1.3e-50 203.4 161 67.1
HPP92_019391 Vanilla planifolia HOM05D005188 ORTHO05D006153 1.7e-50 203.0 168 64.9
EL10Ac6g15302 Beta vulgaris HOM05D005188 ORTHO05D006153 5.1e-50 201.4 126 78.6
PSO541G2775 Papaver somniferum HOM05D005188 ORTHO05D006153 1.5e-49 199.9 167 61.7
THA.LOC104800083 Tarenaya hassleriana HOM05D005188 ORTHO05D006153 1.9e-49 199.5 174 63.2
Oeu050119.1 Olea europaea HOM05D005188 ORTHO05D006153 2.5e-49 199.1 161 64.6
PSO675G9377 Papaver somniferum HOM05D005188 ORTHO05D006153 2.8e-48 195.7 167 61.1
BolC3t18491H Brassica oleracea HOM05D005188 ORTHO05D006153 2.4e-47 192.6 175 61.7
Os12g0189400 Oryza sativa ssp. japonica HOM05D005188 ORTHO05D006153 3.4e-46 188.7 132 71.2
Zm00001eb409220 Zea mays HOM05D005188 ORTHO05D006153 7.1e-44 181.0 158 58.9
Zm00001eb138650 Zea mays HOM05D005188 ORTHO05D006153 9.2e-44 180.6 141 63.8
A09p08510 Brassica napus HOM05D005188 ORTHO05D006153 3.5e-43 178.7 169 60.9
BraA09t36500Z Brassica rapa HOM05D005188 ORTHO05D006153 3.5e-43 178.7 169 60.9
Duzib264G0557 Durio zibethinus HOM05D005188 ORTHO05D006153 1.5e-41 173.3 144 68.1
SEGI_16120 Sequoiadendron giganteum HOM05D005188 ORTHO05D006153 2.8e-40 169.1 160 56.9
Eucgr.I00200 Eucalyptus grandis HOM05D005188 ORTHO05D006153 1.4e-39 166.8 144 65.3
Duzib147G0711 Durio zibethinus HOM05D005188 ORTHO05D006153 6.9e-39 164.5 144 66.7
C03p62290 Brassica napus HOM05D005188 ORTHO05D006153 4.2e-36 155.2 141 62.4
Sc16g0003820 Simmondsia chinensis HOM05D005188 ORTHO05D006153 5.4e-36 154.8 142 66.9
BraA06t26017Z Brassica rapa HOM05D005188 ORTHO05D006153 2.3e-34 149.4 141 61.0
SMO144G0055 Selaginella moellendorffii HOM05D005188 ORTHO05D006153 3.9e-34 148.7 82 81.7
BcaB04g17222 Brassica carinata HOM05D005188 ORTHO05D006153 4.5e-30 135.2 121 57.9
BcaB08g36594 Brassica carinata HOM05D005188 ORTHO05D006153 4.5e-30 135.2 74 86.5
BolC2t07163H Brassica oleracea HOM05D005188 ORTHO05D006153 9.9e-30 134.0 74 85.1
BolC7t41311H Brassica oleracea HOM05D005188 ORTHO05D006153 1.3e-29 133.7 72 87.5
BcaC04g18786 Brassica carinata HOM05D005188 ORTHO05D006153 4.9e-29 131.7 74 83.8
Duzib187G0538 Durio zibethinus HOM05D005188 ORTHO05D006153 2.4e-28 129.4 127 61.4
AUR62003566 Chenopodium quinoa HOM05D005188 ORTHO05D006153 1.0e-26 124.0 166 48.8
Mapoly0116s0042 Marchantia polymorpha HOM05D005188 ORTHO05D006153 1.9e-25 119.8 156 44.9
Cre02.g082500 Chlamydomonas reinhardtii HOM05D005188 ORTHO05D006153 9.0e-23 110.9 136 49.3
AagrBONN_evm.TU.Sc2ySwM_362.2803 Anthoceros agrestis HOM05D005188 ORTHO05D006153 2.0e-22 109.8 93 63.4
BcaC03g13890 Brassica carinata HOM05D005188 ORTHO05D006153 8.4e-21 104.4 74 68.9
CBR_g45633 Chara braunii HOM05D005188 ORTHO05D006153 4.3e-17 92.0 121 46.3
MCO09G058 Micromonas commoda HOM05D005188 ORTHO05D006153 1.6e-16 90.1 136 43.4
Nn5g28540 Nelumbo nucifera HOM05D005188 ORTHO05D006153 1.6e-16 90.1 102 56.9
PRCOL_00004565 Prasinoderma coloniale HOM05D005188 ORTHO05D006153 1.6e-16 90.1 70 62.9
Nitab4.5_0005544g0070 Nicotiana tabacum HOM05D005188 ORTHO05D006153 2.1e-16 89.7 105 59.0
BraA02t09233Z Brassica rapa HOM05D005188 ORTHO05D006153 1.0e-13 80.9 113 50.4
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 2.5e-12 76.3 107 49.5
A02p43130 Brassica napus HOM05D005188 ORTHO05D006153 6.7e-10 68.2 98 48.0
C02p10930 Brassica napus HOM05D005188 ORTHO05D006153 9.7e-09 64.3 30 90.0


User provided reference genes

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