Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14570 Striga asiatica HOM05D000538 ORTHO05D000614 1.8e-81 306.2 202 100.0
SGA_v2.0_scaffold469G52068 Striga asiatica HOM05D000538 ORTHO05D000614 2.4e-41 172.9 130 95.4
SGA_v2.0_scaffold62G21345 Striga asiatica HOM05D000538 ORTHO05D000614 6.9e-36 154.8 181 65.2
SGA_v2.0_scaffold52G19087 Striga asiatica HOM05D000538 ORTHO05D000614 2.9e-34 149.4 197 52.3
SGA_v2.0_scaffold12G06174 Striga asiatica HOM05D000538 ORTHO05D000614 3.8e-34 149.1 181 69.6
SGA_v2.0_scaffold52G19112 Striga asiatica HOM05D000538 ORTHO05D000614 2.1e-29 133.3 181 54.7
SGA_v2.0_scaffold62G21349 Striga asiatica HOM05D000538 ORTHO05D000614 7.6e-27 124.8 82 81.7
SGA_v2.0_scaffold52G19083 Striga asiatica HOM05D000538 ORTHO05D000614 4.9e-26 122.1 181 53.0
SGA_v2.0_scaffold52G19146 Striga asiatica HOM05D000538 ORTHO05D000614 2.1e-21 106.7 81 70.4
SGA_v2.0_scaffold52G19092 Striga asiatica HOM05D000538 ORTHO05D000614 4.8e-21 105.5 177 53.7
SGA_v2.0_scaffold52G19155 Striga asiatica HOM05D000538 ORTHO05D000614 2.6e-19 99.8 181 53.6
SGA_v2.0_scaffold52G19085 Striga asiatica HOM05D000538 ORTHO05D000614 1.0e-18 97.8 82 64.6
SGA_v2.0_scaffold20G09190 Striga asiatica HOM05D000538 ORTHO05D000614 1.3e-18 97.4 160 49.4
SGA_v2.0_scaffold52G19080 Striga asiatica HOM05D000538 ORTHO05D000614 1.7e-18 97.1 237 38.4
SGA_v2.0_scaffold52G19023 Striga asiatica HOM05D000538 ORTHO05D000614 3.9e-15 85.9 238 40.3
SGA_v2.0_scaffold157G37398 Striga asiatica HOM05D000538 ORTHO05D000614 1.1e-14 84.3 155 64.5
SGA_v2.0_scaffold24G10697 Striga asiatica HOM05D000538 ORTHO05D000614 1.1e-09 67.8 127 59.1
SalBow5G1539 Salvia bowleyana HOM05D000538 ORTHO05D000614 2.5e-09 66.6 81 46.9
Oeu058171.1 Olea europaea HOM05D000538 ORTHO05D000614 3.2e-09 66.2 223 30.0
Manes.07G017600 Manihot esculenta HOM05D000538 ORTHO05D000614 1.2e-08 64.3 85 45.9
Potri.009G088400 Populus trichocarpa HOM05D000538 ORTHO05D000614 1.2e-08 64.3 60 53.3
Dinv15618 Davidia involucrata HOM05D000538 ORTHO05D000614 2.7e-08 63.2 47 57.4
Manes.16G016900 Manihot esculenta HOM05D000538 ORTHO05D000614 2.7e-08 63.2 88 44.3
Oeu063070.2 Olea europaea HOM05D000538 ORTHO05D000614 2.7e-08 63.2 92 44.6
MELO3C027126.2 Cucumis melo HOM05D000538 ORTHO05D000614 6.1e-08 62.0 53 49.1
Lj2C275T5 Lonicera japonica HOM05D000538 ORTHO05D000614 7.9e-08 61.6 84 44.0
MSTRG.14651 Avicennia marina HOM05D000538 ORTHO05D000614 1.0e-07 61.2 80 42.5
Atru.chr1.3753 Acer truncatum HOM05D000538 ORTHO05D000614 1.3e-07 60.8 48 52.1
Actinidia26763 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.8e-07 60.5 87 41.4
Sabra16G0183500 Salix brachista HOM05D000538 ORTHO05D000614 2.3e-07 60.1 71 43.7
Cpa.g.sc1622.1 Carica papaya HOM05D000538 ORTHO05D000614 3.0e-07 59.7 77 44.2
CsaV3_6G049420 Cucumis sativus L. HOM05D000538 ORTHO05D000614 3.0e-07 59.7 72 43.1
Migut.H01546 Erythranthe guttata HOM05D000538 ORTHO05D000614 3.0e-07 59.7 82 41.5
Actinidia26954 Actinidia chinensis HOM05D000538 ORTHO05D000614 3.9e-07 59.3 58 50.0
Migut.M01263 Erythranthe guttata HOM05D000538 ORTHO05D000614 3.9e-07 59.3 49 51.0
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.9e-07 59.3 89 40.4
Potri.001G293900 Populus trichocarpa HOM05D000538 ORTHO05D000614 3.9e-07 59.3 85 38.8
PGR004G2796 Punica granatum HOM05D000538 ORTHO05D000614 3.9e-07 59.3 81 39.5
MSTRG.9015 Avicennia marina HOM05D000538 ORTHO05D000614 5.1e-07 58.9 82 47.6
Sabra11G0087800 Salix brachista HOM05D000538 ORTHO05D000614 5.1e-07 58.9 87 41.4
MELO3C032586.2 Cucumis melo HOM05D000538 ORTHO05D000614 6.7e-07 58.5 95 40.0
Sabra11G0087400 Salix brachista HOM05D000538 ORTHO05D000614 6.7e-07 58.5 87 41.4
Sopen04g029590 Solanum pennellii HOM05D000538 ORTHO05D000614 6.7e-07 58.5 81 40.7
SGA_v2.0_scaffold52G19076 Striga asiatica HOM05D000538 ORTHO05D000614 6.7e-07 58.5 82 46.3
PGSC0003DMG400030831 Solanum tuberosum HOM05D000538 ORTHO05D000614 8.7e-07 58.2 81 40.7
ClCG01G022290 Citrullus lanatus HOM05D000538 ORTHO05D000614 1.1e-06 57.8 95 37.9
Nitab4.5_0000786g0080 Nicotiana tabacum HOM05D000538 ORTHO05D000614 1.1e-06 57.8 91 39.6
Peaxi162Scf00030g00224 Petunia axillaris HOM05D000538 ORTHO05D000614 1.5e-06 57.4 79 39.2
MSTRG.13164 Avicennia marina HOM05D000538 ORTHO05D000614 1.9e-06 57.0 88 40.9
Cfa016408 Carpinus fangiana HOM05D000538 ORTHO05D000614 1.9e-06 57.0 51 41.2
Actinidia05541 Actinidia chinensis HOM05D000538 ORTHO05D000614 2.5e-06 56.6 62 40.3
BcaC06g31859 Brassica carinata HOM05D000538 ORTHO05D000614 2.5e-06 56.6 85 38.8
Haze_06686 Corylus avellana HOM05D000538 ORTHO05D000614 2.5e-06 56.6 51 41.2
unitig_8.g3763 Utricularia gibba HOM05D000538 ORTHO05D000614 2.5e-06 56.6 78 41.0
Sed0014375 Sechium edule HOM05D000538 ORTHO05D000614 3.3e-06 56.2 85 43.5
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 4.3e-06 55.8 89 34.8
CARHR232610 Cardamine hirsuta HOM05D000538 ORTHO05D000614 5.7e-06 55.5 103 33.0
Duzib213G0266 Durio zibethinus HOM05D000538 ORTHO05D000614 5.7e-06 55.5 81 40.7
CiPaw.09G080200 Carya illinoinensis HOM05D000538 ORTHO05D000614 7.4e-06 55.1 53 39.6
Ciclev10015528m.g Citrus clementina HOM05D000538 ORTHO05D000614 7.4e-06 55.1 71 42.3
COL.COLO4_13007 Corchorus olitorius HOM05D000538 ORTHO05D000614 9.7e-06 54.7 39 51.3
Manes.17G030100 Manihot esculenta HOM05D000538 ORTHO05D000614 9.7e-06 54.7 90 41.1
SalBow6G4402 Salvia bowleyana HOM05D000538 ORTHO05D000614 9.7e-06 54.7 68 42.6


User provided reference genes

Program Settings