Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14556 Striga asiatica HOM05D024920 ORTHO05D023790 5.2e-63 244.2 123 100.0
SGA_v2.0_scaffold23G10207 Striga asiatica HOM05D024920 ORTHO05D023790 6.7e-18 94.4 69 65.2
Cc11_g13060 Coffea canephora HOM05D000030 ORTHO05D000009 1.1e-17 93.6 68 64.7
COL.COLO4_24257 Corchorus olitorius HOM05D000030 ORTHO05D007344 6.7e-10 67.8 75 45.3
EL10Ac8g19377 Beta vulgaris HOM05D000030 ORTHO05D000009 1.1e-09 67.0 78 42.3
COL.COLO4_20952 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.1e-09 67.0 75 45.3
COL.COLO4_24409 Corchorus olitorius HOM05D002632 ORTHO05D002881 1.1e-09 67.0 75 45.3
COL.COLO4_06728 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.5e-09 66.6 75 45.3
AUR62015261 Chenopodium quinoa HOM05D000030 ORTHO05D000009 2.0e-09 66.2 68 50.0
Duzib168G1506 Durio zibethinus HOM05D000030 ORTHO05D000009 3.3e-09 65.5 74 44.6
COL.COLO4_10262 Corchorus olitorius HOM05D000030 ORTHO05D007344 5.7e-09 64.7 75 41.3
Duzib068G1361 Durio zibethinus HOM05D000030 ORTHO05D000009 5.7e-09 64.7 70 45.7
MSTRG.4308 Avicennia marina HOM05D000030 ORTHO05D000009 1.3e-08 63.5 76 44.7
EL10Ac5g11471 Beta vulgaris HOM05D000030 ORTHO05D000009 1.3e-08 63.5 77 42.9
COL.COLO4_37582 Corchorus olitorius HOM05D000030 ORTHO05D007344 1.3e-08 63.5 75 42.7
SHI01642 Sapria himalayana HOM05D000030 ORTHO05D007344 1.3e-08 63.5 77 42.9
EL10Ac2g03260 Beta vulgaris HOM05D000030 ORTHO05D000009 2.8e-08 62.4 78 39.7
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 2.8e-08 62.4 106 41.5
Duzib235G0836 Durio zibethinus HOM05D000030 ORTHO05D000009 4.8e-08 61.6 57 45.6
Duzib264G0918 Durio zibethinus HOM05D000030 ORTHO05D007344 4.8e-08 61.6 40 60.0
Duzib268G1450 Durio zibethinus HOM05D000030 ORTHO05D000009 4.8e-08 61.6 40 60.0
COL.COLO4_36328 Corchorus olitorius HOM05D000030 ORTHO05D000009 8.2e-08 60.8 96 38.5
SHI32783 Sapria himalayana HOM05D000030 ORTHO05D000009 1.4e-07 60.1 75 42.7
COL.COLO4_33382 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.8e-07 59.7 75 38.7
COL.COLO4_35574 Corchorus olitorius HOM05D000030 ORTHO05D007344 3.1e-07 58.9 40 55.0
Duzib168G0986 Durio zibethinus HOM05D000030 ORTHO05D000009 3.1e-07 58.9 46 54.3
EL10As2g23188 Beta vulgaris HOM05D000030 ORTHO05D000009 4.1e-07 58.5 63 42.9
COL.COLO4_22873 Corchorus olitorius HOM05D000030 ORTHO05D000009 4.1e-07 58.5 40 55.0
Duzib187G1152 Durio zibethinus HOM05D000030 ORTHO05D000009 4.1e-07 58.5 40 57.5
COL.COLO4_25215 Corchorus olitorius HOM05D000030 ORTHO05D000009 5.3e-07 58.2 71 42.3
SHI06427 Sapria himalayana HOM05D000030 ORTHO05D000009 1.5e-06 56.6 43 51.2
SGA_v2.0_scaffold254G45216 Striga asiatica HOM05D024920 ORTHO05D023790 4.5e-06 55.1 43 62.8


User provided reference genes

Program Settings