Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14549 Striga asiatica HOM05D008908 ORTHO05D010362 7.6e-166 587.0 285 100.0
Nitab4.5_0000057g0070 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.5e-25 120.9 258 32.2
Migut.L01035 Erythranthe guttata HOM05D000260 ORTHO05D000318 2.0e-25 120.6 228 40.8
Nitab4.5_0000057g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 5.9e-25 119.0 219 34.2
PGSC0003DMG400006000 Solanum tuberosum HOM05D000072 ORTHO05D000026 1.7e-24 117.5 241 34.9
Peaxi162Scf00564g00519 Petunia axillaris HOM05D000260 ORTHO05D000318 5.0e-24 115.9 249 33.7
Migut.L01038 Erythranthe guttata HOM05D000072 ORTHO05D000026 8.5e-24 115.2 232 39.2
Sopen04g002450 Solanum pennellii HOM05D000260 ORTHO05D000318 8.5e-24 115.2 255 29.4
Lj3P880T62 Lonicera japonica HOM05D016466 ORTHO05D010362 5.5e-23 112.5 242 32.2
Oeu027710.1 Olea europaea HOM05D000072 ORTHO05D000026 7.2e-23 112.1 239 32.6
Solyc04g007390.4 Solanum lycopersicum HOM05D000260 ORTHO05D000318 9.4e-23 111.7 231 31.2
SGA_v2.0_scaffold36G14559 Striga asiatica HOM05D008908 ORTHO05D010362 1.4e-21 107.8 255 34.1
Nitab4.5_0001616g0130 Nicotiana tabacum HOM05D000072 ORTHO05D000026 2.3e-21 107.1 276 31.2
SalBow8G2767 Salvia bowleyana HOM05D008908 ORTHO05D010362 5.7e-20 102.4 239 33.5
Oeu054975.1 Olea europaea HOM05D000072 ORTHO05D000026 7.4e-20 102.1 255 32.2
SalBow8G5092 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.7e-19 100.9 239 33.5
Sopen05g004710 Solanum pennellii HOM05D000260 ORTHO05D000318 2.2e-19 100.5 224 33.0
vmacro10593 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 8.2e-19 98.6 262 31.3
Nitab4.5_0005528g0080 Nicotiana tabacum HOM05D000260 ORTHO05D000318 1.1e-18 98.2 247 32.0
SalBow8G3049 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.4e-18 97.1 241 32.4
Migut.L01037 Erythranthe guttata HOM05D000072 ORTHO05D000026 3.1e-18 96.7 239 32.2
Actinidia16679 Actinidia chinensis HOM05D000260 ORTHO05D000318 4.1e-18 96.3 221 31.7
Hma1.2p1_2390F.1_g321190 Hydrangea macrophylla HOM05D000072 ORTHO05D000026 4.1e-18 96.3 277 31.4
Peaxi162Scf00179g00126 Petunia axillaris HOM05D000072 ORTHO05D000026 9.1e-18 95.1 226 31.4
PGSC0003DMG400030579 Solanum tuberosum HOM05D000072 ORTHO05D000026 1.2e-17 94.7 247 30.4
Nitab4.5_0014879g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 1.6e-17 94.4 239 31.8
QL01p002259 Quercus lobata HOM05D000072 ORTHO05D000026 1.6e-17 94.4 264 29.2
Solyc05g008940.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 2.0e-17 94.0 247 29.6
Oeu059491.1 Olea europaea HOM05D000072 ORTHO05D000026 3.5e-17 93.2 227 29.5
QL01p040233 Quercus lobata HOM05D000260 ORTHO05D000318 3.5e-17 93.2 258 29.5
SalBow8G1428 Salvia bowleyana HOM05D008908 ORTHO05D010362 4.5e-17 92.8 239 33.1
PGSC0003DMG400014063 Solanum tuberosum HOM05D008908 ORTHO05D010362 4.5e-17 92.8 243 32.1
PGSC0003DMG402030531 Solanum tuberosum HOM05D000260 ORTHO05D000318 4.5e-17 92.8 244 31.1
Sopen05g004700 Solanum pennellii HOM05D000260 ORTHO05D000318 5.9e-17 92.4 247 28.7
Nitab4.5_0005528g0040 Nicotiana tabacum HOM05D000072 ORTHO05D000026 7.7e-17 92.0 214 32.7
CAN.G610.32 Capsicum annuum HOM05D000260 ORTHO05D000318 1.0e-16 91.7 255 30.6
Peaxi162Scf00179g00316 Petunia axillaris HOM05D000260 ORTHO05D000318 1.3e-16 91.3 231 31.2
SalBow8G5443 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.2e-16 90.5 266 27.8
Actinidia37053 Actinidia chinensis HOM05D000260 ORTHO05D000318 2.9e-16 90.1 204 28.9
SalBow8G0487 Salvia bowleyana HOM05D000260 ORTHO05D000318 2.9e-16 90.1 245 30.6
Lj3A880G112 Lonicera japonica HOM05D000260 ORTHO05D010362 3.8e-16 89.7 265 27.5
PGSC0003DMG400014577 Solanum tuberosum HOM05D000072 ORTHO05D000026 3.8e-16 89.7 256 29.3
Oeu054969.1 Olea europaea HOM05D000072 ORTHO05D000026 5.0e-16 89.4 289 30.8
SalBow8G2526 Salvia bowleyana HOM05D008908 ORTHO05D010362 5.0e-16 89.4 232 30.6
CAN.G610.53 Capsicum annuum HOM05D000072 ORTHO05D000026 8.5e-16 88.6 280 31.4
Sopen05g004740 Solanum pennellii HOM05D000260 ORTHO05D000318 8.5e-16 88.6 245 28.6
CAN.G610.42 Capsicum annuum HOM05D000072 ORTHO05D000026 1.1e-15 88.2 239 31.8
CSS0044018 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 1.5e-15 87.8 234 29.5
SalBow8G3152 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.5e-15 87.8 245 29.0
SalBow8G4693 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.5e-15 87.8 241 29.5
SalBow8G3684 Salvia bowleyana HOM05D000260 ORTHO05D000318 1.9e-15 87.4 245 30.2
Nitab4.5_0000694g0060 Nicotiana tabacum HOM05D000260 ORTHO05D000318 2.5e-15 87.0 232 30.2
SalBow8G0525 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.5e-15 87.0 245 29.0
Solyc05g008990.3 Solanum lycopersicum HOM05D000260 ORTHO05D000318 5.5e-15 85.9 234 28.2
Solyc05g009090.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 5.5e-15 85.9 250 28.8
CSS0009724 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 7.2e-15 85.5 247 26.7
CAN.G610.38 Capsicum annuum HOM05D000260 ORTHO05D000318 1.2e-14 84.7 236 28.8
Peaxi162Scf00179g00222 Petunia axillaris HOM05D000260 ORTHO05D000318 1.2e-14 84.7 245 29.8
PGSC0003DMG400030536 Solanum tuberosum HOM05D000260 ORTHO05D000318 1.6e-14 84.3 231 28.6
Oeu054974.1 Olea europaea HOM05D000260 ORTHO05D000318 2.1e-14 84.0 247 30.4
ClCG05G022530 Citrullus lanatus HOM05D000260 ORTHO05D000318 2.7e-14 83.6 222 30.2
CsaV3_5G034550 Cucumis sativus L. HOM05D000072 ORTHO05D000026 2.7e-14 83.6 221 30.3
CsaV3_5G034530 Cucumis sativus L. HOM05D000260 ORTHO05D000318 8.0e-14 82.0 221 29.4
SalBow8G0389 Salvia bowleyana HOM05D008908 ORTHO05D010362 8.0e-14 82.0 245 28.6
arahy.Tifrunner.gnm1.ann1.HNK57V Arachis hypogaea HOM05D008908 ORTHO05D010362 1.4e-13 81.3 262 27.1
SalBow8G5024 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.8e-13 80.9 238 29.0
CSS0021340 Camellia sinensis var. sinensis HOM05D000260 ORTHO05D000318 3.0e-13 80.1 230 28.3
Nitab4.5_0000694g0040 Nicotiana tabacum HOM05D008908 ORTHO05D010362 3.0e-13 80.1 173 34.7
PGSC0003DMG400030535 Solanum tuberosum HOM05D000260 ORTHO05D000318 5.2e-13 79.3 214 29.0
SalBow8G0723 Salvia bowleyana HOM05D008908 ORTHO05D010362 6.8e-13 79.0 250 26.4
Dinv31612 Davidia involucrata HOM05D016466 ORTHO05D010362 1.2e-12 78.2 231 32.0
QL05p056320 Quercus lobata HOM05D000072 ORTHO05D000026 1.2e-12 78.2 249 29.3
SalBow8G3654 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.5e-12 77.8 231 28.1
vmacro10588 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.0e-12 77.4 240 28.8
vmacro10594 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 2.6e-12 77.0 255 26.7
vmacro10591 Vaccinium macrocarpon HOM05D000072 ORTHO05D000026 3.4e-12 76.6 230 27.8
CAN.G610.47 Capsicum annuum HOM05D008908 ORTHO05D010362 5.7e-12 75.9 199 29.6
Actinidia16678 Actinidia chinensis HOM05D000260 ORTHO05D000318 9.7e-12 75.1 277 24.9
Phvul.007G030900 Phaseolus vulgaris HOM05D000260 ORTHO05D000318 2.2e-11 73.9 247 29.6
Oeu027004.1 Olea europaea HOM05D000260 ORTHO05D000318 8.3e-11 72.0 218 29.8
FAN12G0686 Fragaria x ananassa HOM05D000260 ORTHO05D000318 2.4e-10 70.5 244 28.3
BraA09t39426Z Brassica rapa HOM05D000260 ORTHO05D000318 4.1e-10 69.7 249 26.9
FAN12G0680 Fragaria x ananassa HOM05D000260 ORTHO05D000318 7.0e-10 68.9 244 27.9
FvH4_4g26892 Fragaria vesca HOM05D000072 ORTHO05D000026 9.1e-10 68.6 256 28.9
arahy.Tifrunner.gnm1.ann1.S2DFEG Arachis hypogaea HOM05D000260 ORTHO05D000318 1.6e-09 67.8 254 25.6
SalBow8G1962 Salvia bowleyana HOM05D008908 ORTHO05D010362 1.6e-09 67.8 149 32.9
Sopen05g004820 Solanum pennellii HOM05D000072 ORTHO05D011910 1.6e-09 67.8 222 29.3
FvH4_4g26841 Fragaria vesca HOM05D000260 ORTHO05D000318 2.7e-09 67.0 233 27.5
SalBow8G0014 Salvia bowleyana HOM05D000260 ORTHO05D000318 2.7e-09 67.0 254 28.3
Aqoxy3G00215 Aquilegia oxysepala HOM05D000260 ORTHO05D000318 1.0e-08 65.1 248 26.6
Lj3P881T45 Lonicera japonica HOM05D008908 ORTHO05D010362 1.0e-08 65.1 174 23.6
CARHR026090 Cardamine hirsuta HOM05D000260 ORTHO05D000318 1.3e-08 64.7 247 25.9
Ca_11131_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 1.7e-08 64.3 236 25.8
CiPaw.06G017800 Carya illinoinensis HOM05D000072 ORTHO05D000026 2.2e-08 63.9 266 24.4
SalBow8G4649 Salvia bowleyana HOM05D008908 ORTHO05D010362 2.2e-08 63.9 127 33.9
A07p12570 Brassica napus HOM05D000260 ORTHO05D000318 5.0e-08 62.8 246 26.0
Glyma.20G119700 Glycine max HOM05D000260 ORTHO05D000318 1.5e-07 61.2 173 28.9
BcaC06g35216 Brassica carinata HOM05D000260 ORTHO05D000318 3.2e-07 60.1 222 27.0
C07p18570 Brassica napus HOM05D000260 ORTHO05D000318 3.2e-07 60.1 222 27.0
BolC7t42368H Brassica oleracea HOM05D000260 ORTHO05D000318 3.2e-07 60.1 222 27.0
BraA07t29035Z Brassica rapa HOM05D000260 ORTHO05D000318 3.2e-07 60.1 246 26.0
Haze_00644 Corylus avellana HOM05D000260 ORTHO05D000318 4.2e-07 59.7 252 27.4
Oeu054968.1 Olea europaea HOM05D000260 ORTHO05D000318 5.5e-07 59.3 140 30.7
RcHm_v2.0_Chr4g0434531 Rosa chinensis HOM05D000260 ORTHO05D000318 7.2e-07 58.9 206 30.6
SalBow8G3380 Salvia bowleyana HOM05D000260 ORTHO05D000318 7.2e-07 58.9 251 27.5
Oeu027003.1 Olea europaea HOM05D000072 ORTHO05D000026 8.0e-06 55.5 190 25.8


User provided reference genes

Program Settings