Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14535 Striga asiatica HOM05D007757 ORTHO05D009619 7.1e-55 217.2 127 100.0
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 5.5e-15 84.7 72 48.6
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 6.7e-13 77.8 62 59.7
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 8.8e-13 77.4 69 47.8
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 1.8e-10 69.7 68 45.6
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 1.0e-08 63.9 76 39.5
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 1.7e-08 63.2 60 41.7
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 2.2e-08 62.8 79 41.8
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 2.2e-08 62.8 57 43.9
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 6.5e-08 61.2 61 36.1
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 6.5e-08 61.2 61 36.1
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 6.5e-08 61.2 125 30.4
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 6.5e-08 61.2 57 43.9
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 8.5e-08 60.8 67 41.8
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 8.5e-08 60.8 67 41.8
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 8.5e-08 60.8 67 41.8
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 8.5e-08 60.8 67 41.8
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 8.5e-08 60.8 67 41.8
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 1.4e-07 60.1 60 41.7
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 3.2e-07 58.9 57 36.8
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 1.6e-06 56.6 70 32.9
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 1.6e-06 56.6 71 33.8
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 2.1e-06 56.2 72 36.1
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 3.6e-06 55.5 57 35.1
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 3.6e-06 55.5 55 38.2
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 7.9e-06 54.3 58 41.4


User provided reference genes

Program Settings