Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14499 Striga asiatica HOM05D050145 ORTHO05D011229 1.0e-140 503.4 263 100.0
Hund05803 Selenicereus undatus HOM05D050145 ORTHO05D011229 1.8e-15 87.4 92 43.5
Migut.L01136 Erythranthe guttata HOM05D010804 ORTHO05D011229 6.9e-12 75.5 48 79.2
DCAR_023735 Daucus carota HOM05D011721 ORTHO05D013592 2.1e-08 63.9 46 67.4
Nitab4.5_0005310g0030 Nicotiana tabacum HOM05D010804 ORTHO05D011229 2.1e-08 63.9 42 71.4
Atru.chr11.1512 Acer truncatum HOM05D010804 ORTHO05D011229 3.9e-07 59.7 46 63.0
MD13G1053500 Malus domestica HOM05D010804 ORTHO05D011229 1.1e-06 58.2 40 75.0
Potri.008G113500 Populus trichocarpa HOM05D010804 ORTHO05D011229 1.5e-06 57.8 43 69.8
TWI31G0170 Tripterygium wilfordii HOM05D010804 ORTHO05D011229 2.5e-06 57.0 46 63.0
COL.COLO4_27752 Corchorus olitorius HOM05D010804 ORTHO05D011229 5.6e-06 55.8 46 60.9
Duzib248G1159 Durio zibethinus HOM05D010804 ORTHO05D011229 7.4e-06 55.5 40 70.0
Gohir.A13G092800 Gossypium hirsutum HOM05D010804 ORTHO05D011229 7.4e-06 55.5 37 75.7
Gohir.D13G090100 Gossypium hirsutum HOM05D010804 ORTHO05D011229 7.4e-06 55.5 37 75.7
Manes.06G077900 Manihot esculenta HOM05D010804 ORTHO05D011229 7.4e-06 55.5 46 60.9
Prupe.1G298600 Prunus persica HOM05D010804 ORTHO05D011229 9.6e-06 55.1 46 65.2


User provided reference genes

Program Settings