Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14477 Striga asiatica HOM05D008285 ORTHO05D010431 1.0e-81 306.6 148 100.0
Hma1.2p1_0859F.1_g229500 Hydrangea macrophylla HOM05D008285 ORTHO05D010431 6.0e-13 78.2 74 63.5
SalBow1G4672 Salvia bowleyana HOM05D008285 ORTHO05D010431 7.8e-13 77.8 46 87.0
SalBow1G6462 Salvia bowleyana HOM05D008285 ORTHO05D010431 7.8e-13 77.8 46 87.0
DCAR_032534 Daucus carota HOM05D008285 ORTHO05D010431 1.3e-12 77.0 58 74.1
Gohir.1Z049481 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.7e-12 76.6 46 84.8
Gohir.1Z049931 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.7e-12 76.6 46 84.8
Gohir.A02G134106 Gossypium hirsutum HOM05D008285 ORTHO05D010431 1.7e-12 76.6 46 84.8
Gorai.009G442800 Gossypium raimondii HOM05D008285 ORTHO05D010431 1.7e-12 76.6 46 84.8
CSS0043912 Camellia sinensis var. sinensis HOM05D008285 ORTHO05D010431 2.3e-12 76.3 46 84.8
PGSC0003DMG400000878 Solanum tuberosum HOM05D008285 ORTHO05D010431 3.0e-12 75.9 46 82.6
Nn031s41612 Nelumbo nucifera HOM05D008285 ORTHO05D010431 5.1e-12 75.1 46 82.6
Nn064s42214 Nelumbo nucifera HOM05D008285 ORTHO05D010431 5.1e-12 75.1 46 82.6
RcHm_v2.0_CPg0502841 Rosa chinensis HOM05D008285 ORTHO05D010431 5.1e-12 75.1 46 82.6
Gohir.A01G140110 Gossypium hirsutum HOM05D008285 ORTHO05D010431 6.6e-12 74.7 46 82.6
PGR111G0120 Punica granatum HOM05D008285 ORTHO05D010431 1.1e-11 73.9 46 82.6
ATCG01020 Arabidopsis thaliana HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
C09p40390 Brassica napus HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BolSC29t60502H Brassica oleracea HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BolSC35t60700H Brassica oleracea HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BolSC44t60819H Brassica oleracea HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BraSC103t45425Z Brassica rapa HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BraSC138t45538Z Brassica rapa HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BraSC25t45906Z Brassica rapa HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
BraSC59t46547Z Brassica rapa HOM05D008285 ORTHO05D010431 1.5e-11 73.6 46 80.4
C02p28770 Brassica napus HOM05D008285 ORTHO05D010431 2.5e-11 72.8 50 74.0
BolC2t08924H Brassica oleracea HOM05D008285 ORTHO05D010431 2.5e-11 72.8 50 74.0
BolC9t56809H Brassica oleracea HOM05D008285 ORTHO05D010431 2.5e-11 72.8 46 80.4
Gohir.A12G229600 Gossypium hirsutum HOM05D008285 ORTHO05D010431 2.5e-11 72.8 46 80.4
RcHm_v2.0_Chr4g0421191 Rosa chinensis HOM05D008285 ORTHO05D010431 2.5e-11 72.8 46 80.4
Nn212s45209 Nelumbo nucifera HOM05D008285 ORTHO05D010431 5.6e-11 71.6 47 83.0
Manes.18G138300 Manihot esculenta HOM05D008285 ORTHO05D010431 9.5e-11 70.9 46 78.3
CARHR282410 Cardamine hirsuta HOM05D008285 ORTHO05D010431 1.2e-10 70.5 46 80.4
PSO063G2603 Papaver somniferum HOM05D008285 ORTHO05D010431 1.2e-10 70.5 62 61.3
HanXRQCPg0580381 Helianthus annuus HOM05D008285 ORTHO05D010431 2.8e-10 69.3 46 80.4
PSO339G5238 Papaver somniferum HOM05D008285 ORTHO05D010431 2.8e-10 69.3 50 70.0
Aqoxy1G03262 Aquilegia oxysepala HOM05D008285 ORTHO05D010431 3.6e-10 68.9 55 65.5
MBI10_g47591_MAGBIO Magnolia biondii HOM05D005034 ORTHO05D006234 3.6e-10 68.9 46 73.9
PSO548G0110 Papaver somniferum HOM05D008285 ORTHO05D010431 3.6e-10 68.9 46 80.4
BolC9t56929H Brassica oleracea HOM05D008285 ORTHO05D010431 4.7e-10 68.6 46 76.1
Nn8g41105 Nelumbo nucifera HOM05D008285 ORTHO05D010431 4.7e-10 68.6 46 76.1
CAN.G1045.12 Capsicum annuum HOM05D008285 ORTHO05D010431 8.1e-10 67.8 55 65.5
CAN.G1045.15 Capsicum annuum HOM05D008285 ORTHO05D010431 8.1e-10 67.8 55 65.5
CAN.G222.14 Capsicum annuum HOM05D008285 ORTHO05D010431 8.1e-10 67.8 55 65.5
CAN.G413.8 Capsicum annuum HOM05D008285 ORTHO05D010431 8.1e-10 67.8 55 65.5
CAN.G657.10 Capsicum annuum HOM05D008285 ORTHO05D010431 1.1e-09 67.4 70 55.7
CAN.G1324.6 Capsicum annuum HOM05D008285 ORTHO05D010431 1.4e-09 67.0 55 65.5
CAN.G1431.2 Capsicum annuum HOM05D008285 ORTHO05D010431 2.4e-09 66.2 55 63.6
Nitab4.5_0015353g0010 Nicotiana tabacum HOM05D008285 ORTHO05D010431 3.1e-09 65.9 45 77.8
BolSC45t60913H Brassica oleracea HOM05D008285 ORTHO05D010431 4.0e-09 65.5 57 66.7
CAN.G262.5 Capsicum annuum HOM05D008285 ORTHO05D010431 4.0e-09 65.5 54 61.1
CAN.G965.8 Capsicum annuum HOM05D008285 ORTHO05D010431 4.0e-09 65.5 55 63.6
CAN.G213.15 Capsicum annuum HOM05D008285 ORTHO05D010431 5.2e-09 65.1 48 66.7
Nn1g08636 Nelumbo nucifera HOM05D008285 ORTHO05D010431 5.2e-09 65.1 46 73.9
BolC2t10592H Brassica oleracea HOM05D008285 ORTHO05D010431 1.2e-08 63.9 42 76.2
CAN.G8.24 Capsicum annuum HOM05D008285 ORTHO05D010431 1.2e-08 63.9 55 61.8
Solyc03g013610.1 Solanum lycopersicum HOM05D008285 ORTHO05D010431 1.2e-08 63.9 46 73.9
Lalb_Chr07g0191721 Lupinus albus HOM05D008285 ORTHO05D010431 1.5e-08 63.5 47 70.2
Medtr4g006140 Medicago truncatula HOM05D008285 ORTHO05D010431 5.8e-08 61.6 44 70.5
Psat5g142800 Pisum sativum HOM05D008285 ORTHO05D010431 1.7e-07 60.1 46 67.4
Potri.009G163200 Populus trichocarpa HOM05D008285 ORTHO05D010431 4.9e-07 58.5 49 67.3


User provided reference genes

Program Settings