Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14463 Striga asiatica HOM05D003787 ORTHO05D001736 7.7e-246 853.6 501 100.0
Migut.L01187 Erythranthe guttata HOM05D003787 ORTHO05D001736 2.5e-26 124.4 152 53.3
Oeu004587.1 Olea europaea HOM05D011975 ORTHO05D001736 5.7e-23 113.2 247 36.8
PGR119G1736 Punica granatum HOM05D003787 ORTHO05D001736 2.8e-22 110.9 170 45.3
Hma1.2p1_0566F.1_g179820 Hydrangea macrophylla HOM05D003787 ORTHO05D001736 1.5e-20 105.1 181 40.9
Rhsim09G0127000 Rhododendron simsii HOM05D003787 ORTHO05D001736 3.2e-18 97.4 166 45.2
MSTRG.755 Avicennia marina HOM05D011975 ORTHO05D001736 2.1e-17 94.7 157 45.2
Actinidia13966 Actinidia chinensis HOM05D003787 ORTHO05D001736 1.4e-16 92.0 207 38.6
QL03p074082 Quercus lobata HOM05D003787 ORTHO05D001736 3.9e-16 90.5 170 41.8
CiPaw.05G124800 Carya illinoinensis HOM05D003787 ORTHO05D001736 6.7e-16 89.7 248 35.5
Ciclev10033684m.g Citrus clementina HOM05D003787 ORTHO05D001736 7.4e-15 86.3 176 39.2
GSVIVG01012223001 Vitis vinifera HOM05D003787 ORTHO05D001736 7.4e-15 86.3 122 44.3
Nitab4.5_0007460g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.3e-14 85.5 165 43.0
SHI15724 Sapria himalayana HOM05D003787 ORTHO05D001736 1.7e-14 85.1 189 40.7
CAN.G1377.3 Capsicum annuum HOM05D011975 ORTHO05D001736 8.2e-14 82.8 172 42.4
Duzib268G1106 Durio zibethinus HOM05D003787 ORTHO05D001736 2.4e-13 81.3 171 39.8
Peaxi162Scf00667g00065 Petunia axillaris HOM05D011975 ORTHO05D001736 2.4e-13 81.3 160 39.4
Cpa.g.sc1.128 Carica papaya HOM05D003787 ORTHO05D001736 3.1e-13 80.9 193 38.3
Potri.008G096300 Populus trichocarpa HOM05D003787 ORTHO05D001736 7.0e-13 79.7 167 37.1
vmacro10428 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 7.0e-13 79.7 99 51.5
Atru.chr11.1622 Acer truncatum HOM05D003787 ORTHO05D001736 1.2e-12 79.0 265 32.8
COL.COLO4_27878 Corchorus olitorius HOM05D003787 ORTHO05D001736 4.5e-12 77.0 166 36.1
Lalb_Chr04g0255641 Lupinus albus HOM05D014318 ORTHO05D001736 4.5e-12 77.0 194 34.0
Nitab4.5_0001118g0030 Nicotiana tabacum HOM05D011975 ORTHO05D001736 4.5e-12 77.0 155 39.4
Sabra10G0120000 Salix brachista HOM05D003787 ORTHO05D001736 5.9e-12 76.6 138 37.7
Thecc.02G330000 Theobroma cacao HOM05D003787 ORTHO05D001736 5.9e-12 76.6 242 32.2
DCAR_024124 Daucus carota HOM05D003787 ORTHO05D001736 1.0e-11 75.9 229 30.6
Nitab4.5_0026364g0010 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.0e-11 75.9 154 41.6
Potri.010G158000 Populus trichocarpa HOM05D003787 ORTHO05D001736 1.0e-11 75.9 162 35.8
Sabra08G0072600 Salix brachista HOM05D003787 ORTHO05D001736 1.3e-11 75.5 140 39.3
TAR622G0628 Trochodendron aralioides HOM05D003787 ORTHO05D001736 1.3e-11 75.5 161 40.4
CSS0023913 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 1.7e-11 75.1 153 39.9
Peaxi162Scf00026g00163 Petunia axillaris HOM05D011975 ORTHO05D001736 1.7e-11 75.1 155 40.6
CANSAT64G2286 Cannabis sativa HOM05D003787 ORTHO05D001736 2.2e-11 74.7 88 51.1
Lalb_Chr10g0098891 Lupinus albus HOM05D014318 ORTHO05D001736 2.2e-11 74.7 152 36.2
Solyc01g010280.3 Solanum lycopersicum HOM05D011975 ORTHO05D001736 2.2e-11 74.7 158 41.1
Duzib251G0768 Durio zibethinus HOM05D003787 ORTHO05D001736 2.9e-11 74.3 233 33.5
Sopen01g005900 Solanum pennellii HOM05D011975 ORTHO05D001736 2.9e-11 74.3 158 41.1
Nn4g23435 Nelumbo nucifera HOM05D006637 ORTHO05D001736 3.8e-11 73.9 168 40.5
TAR374G1256 Trochodendron aralioides HOM05D003787 ORTHO05D001736 6.5e-11 73.2 183 37.7
DCAR_030042 Daucus carota HOM05D003787 ORTHO05D001736 8.5e-11 72.8 208 33.2
TWI79G0236 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 8.5e-11 72.8 169 42.0
Haze_11903 Corylus avellana HOM05D003787 ORTHO05D001736 1.1e-10 72.4 163 38.7
TAR371G0370 Trochodendron aralioides HOM05D006637 ORTHO05D001736 1.5e-10 72.0 180 37.8
Nitab4.5_0003583g0020 Nicotiana tabacum HOM05D011975 ORTHO05D001736 1.9e-10 71.6 150 38.7
Psat2g130920 Pisum sativum HOM05D014318 ORTHO05D001736 1.9e-10 71.6 129 41.1
ClCG05G023700 Citrullus lanatus HOM05D003787 ORTHO05D001736 2.5e-10 71.2 147 42.2
Atru.chr9.567 Acer truncatum HOM05D006637 ORTHO05D001736 3.2e-10 70.9 145 36.6
Dinv34065 Davidia involucrata HOM05D003787 ORTHO05D001736 3.2e-10 70.9 159 39.0
Actinidia17586 Actinidia chinensis HOM05D003787 ORTHO05D001736 4.2e-10 70.5 87 47.1
CsaV3_5G033340 Cucumis sativus L. HOM05D003787 ORTHO05D001736 4.2e-10 70.5 174 39.1
TWI75G0087 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 4.2e-10 70.5 177 39.5
Cfa007670 Carpinus fangiana HOM05D003787 ORTHO05D001736 5.5e-10 70.1 74 58.1
MD13G1062500 Malus domestica HOM05D003787 ORTHO05D001736 5.5e-10 70.1 182 35.7
PGSC0003DMG400021892 Solanum tuberosum HOM05D011975 ORTHO05D001736 5.5e-10 70.1 146 42.5
Lalb_Chr17g0341211 Lupinus albus HOM05D014318 ORTHO05D001736 7.2e-10 69.7 260 27.7
Nn3g17457 Nelumbo nucifera HOM05D003787 ORTHO05D001736 7.2e-10 69.7 172 39.0
Nitab4.5_0007320g0010 Nicotiana tabacum HOM05D003787 ORTHO05D001736 7.2e-10 69.7 164 36.6
Haze_14428 Corylus avellana HOM05D003787 ORTHO05D001736 9.4e-10 69.3 119 42.9
Dinv16736 Davidia involucrata HOM05D003787 ORTHO05D001736 9.4e-10 69.3 160 35.6
CDE04G2454 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 1.2e-09 68.9 176 39.8
Lsat_1_v5_gn_2_90140 Lactuca sativa HOM05D003787 ORTHO05D001736 1.2e-09 68.9 105 45.7
Aqoxy3G03685 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 1.6e-09 68.6 109 46.8
Medtr5g045480 Medicago truncatula HOM05D003787 ORTHO05D001736 1.6e-09 68.6 126 39.7
TWI31G1463 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 1.6e-09 68.6 166 38.6
Actinidia16162 Actinidia chinensis HOM05D003787 ORTHO05D001736 2.1e-09 68.2 61 57.4
Migut.H00622 Erythranthe guttata HOM05D003787 ORTHO05D001736 2.1e-09 68.2 97 44.3
Potri.017G094300 Populus trichocarpa HOM05D003787 ORTHO05D001736 2.1e-09 68.2 116 38.8
MELO3C012154.2 Cucumis melo HOM05D003787 ORTHO05D001736 2.7e-09 67.8 112 44.6
Glyma.01G060001 Glycine max HOM05D014318 ORTHO05D001736 2.7e-09 67.8 136 39.0
Nitab4.5_0003841g0060 Nicotiana tabacum HOM05D003787 ORTHO05D001736 2.7e-09 67.8 164 36.0
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 4.7e-09 67.0 152 36.2
Dinv33830 Davidia involucrata HOM05D003787 ORTHO05D001736 4.7e-09 67.0 77 50.6
Gohir.A12G161000 Gossypium hirsutum HOM05D039012 ORTHO05D001736 4.7e-09 67.0 58 65.5
Gohir.D05G306900 Gossypium hirsutum HOM05D003787 ORTHO05D001736 4.7e-09 67.0 184 34.8
Gorai.009G326900 Gossypium raimondii HOM05D003787 ORTHO05D001736 4.7e-09 67.0 184 34.8
Nitab4.5_0001637g0040 Nicotiana tabacum HOM05D003787 ORTHO05D001736 4.7e-09 67.0 225 26.7
PSO017G1216 Papaver somniferum HOM05D006637 ORTHO05D001736 4.7e-09 67.0 85 51.8
PSO478G3423 Papaver somniferum HOM05D006637 ORTHO05D001736 4.7e-09 67.0 85 51.8
Prupe.1G287500 Prunus persica HOM05D003787 ORTHO05D001736 4.7e-09 67.0 134 38.1
unitig_8.g3183 Utricularia gibba HOM05D003787 ORTHO05D001736 4.7e-09 67.0 194 35.1
VMungo1215G1514 Vigna mungo HOM05D014318 ORTHO05D001736 4.7e-09 67.0 185 33.0
Thhalv10005553m.g Eutrema salsugineum HOM05D003787 ORTHO05D001736 6.1e-09 66.6 162 35.8
MD16G1060800 Malus domestica HOM05D003787 ORTHO05D001736 6.1e-09 66.6 193 34.7
Zm00001eb305470 Zea mays HOM05D003787 ORTHO05D001736 6.1e-09 66.6 155 33.5
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 8.0e-09 66.2 69 50.7
Cc07_g04250 Coffea canephora HOM05D003787 ORTHO05D001736 1.0e-08 65.9 78 50.0
CDE02G2765 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 2.3e-08 64.7 159 33.3
FvH4_4g29990 Fragaria vesca HOM05D003787 ORTHO05D001736 2.3e-08 64.7 100 39.0
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 2.3e-08 64.7 100 39.0
Glyma.19G030300 Glycine max HOM05D003787 ORTHO05D001736 2.3e-08 64.7 105 40.0
Nitab4.5_0002960g0050 Nicotiana tabacum HOM05D003787 ORTHO05D001736 3.0e-08 64.3 200 29.0
Phvul.004G037400 Phaseolus vulgaris HOM05D003787 ORTHO05D001736 3.0e-08 64.3 58 55.2
SalBow1G3309 Salvia bowleyana HOM05D003787 ORTHO05D001736 3.0e-08 64.3 113 39.8
SalBow1G5677 Salvia bowleyana HOM05D003787 ORTHO05D001736 3.0e-08 64.3 113 39.8
Sc11g0002500 Simmondsia chinensis HOM05D003787 ORTHO05D001736 3.0e-08 64.3 158 34.2
Ca_04304_v3 Cicer arietinum L. HOM05D003787 ORTHO05D001736 4.0e-08 63.9 78 50.0
Gorai.008G176900 Gossypium raimondii HOM05D039012 ORTHO05D001736 4.0e-08 63.9 103 45.6
Lju41C3T13 Lonicera japonica HOM05D003787 ORTHO05D001736 4.0e-08 63.9 144 36.8
Sabra17G0083100 Salix brachista HOM05D003787 ORTHO05D001736 4.0e-08 63.9 93 43.0
FAN22G0001 Fragaria x ananassa HOM05D003787 ORTHO05D001736 5.2e-08 63.5 100 41.0
RcHm_v2.0_Chr4g0438271 Rosa chinensis HOM05D003787 ORTHO05D001736 5.2e-08 63.5 85 48.2
arahy.Tifrunner.gnm1.ann1.NP9FW8 Arachis hypogaea HOM05D003787 ORTHO05D001736 6.7e-08 63.2 59 49.2
FAN17G0759 Fragaria x ananassa HOM05D003787 ORTHO05D001736 6.7e-08 63.2 100 38.0
PSO478G0913 Papaver somniferum HOM05D006637 ORTHO05D001736 6.7e-08 63.2 67 58.2
Sed0025283 Sechium edule HOM05D003787 ORTHO05D001736 6.7e-08 63.2 166 36.7
CSS0001662 Camellia sinensis var. sinensis HOM05D003787 ORTHO05D001736 8.8e-08 62.8 55 60.0
CDE05G3272 Ceratophyllum demersum HOM05D003787 ORTHO05D001736 8.8e-08 62.8 156 32.1
Glyma.13G056300 Glycine max HOM05D003787 ORTHO05D001736 8.8e-08 62.8 73 46.6
PSO017G7320 Papaver somniferum HOM05D006637 ORTHO05D001736 8.8e-08 62.8 67 58.2
THA.LOC104805198 Tarenaya hassleriana HOM05D003787 ORTHO05D001736 8.8e-08 62.8 61 60.7
HPP92_011441 Vanilla planifolia HOM05D003787 ORTHO05D001736 8.8e-08 62.8 61 59.0
Potri.004G120400 Populus trichocarpa HOM05D003787 ORTHO05D001736 1.1e-07 62.4 82 43.9
Sp2g14470 Schrenkiella parvula HOM05D003787 ORTHO05D001736 1.1e-07 62.4 101 42.6
TPR.G24475 Trifolium pratense HOM05D003787 ORTHO05D000653 1.1e-07 62.4 123 40.7
Gohir.D12G164300 Gossypium hirsutum HOM05D039012 ORTHO05D001736 1.5e-07 62.0 93 47.3
Oeu007068.1 Olea europaea HOM05D003787 ORTHO05D001736 1.5e-07 62.0 108 38.0
arahy.Tifrunner.gnm1.ann1.MG99FN Arachis hypogaea HOM05D003787 ORTHO05D001736 2.0e-07 61.6 152 28.9
Peaxi162Scf00451g00113 Petunia axillaris HOM05D003787 ORTHO05D001736 2.0e-07 61.6 231 28.6
Sc04g0007550 Simmondsia chinensis HOM05D003787 ORTHO05D001736 2.0e-07 61.6 228 29.8
TAR629G2847 Trochodendron aralioides HOM05D003787 ORTHO05D001736 2.0e-07 61.6 143 35.7
CAN.G83.4 Capsicum annuum HOM05D003787 ORTHO05D001736 2.6e-07 61.2 211 28.4
Lj2g0027532 Lotus japonicus HOM05D014318 ORTHO05D001736 2.6e-07 61.2 79 48.1
THA.LOC104800368 Tarenaya hassleriana HOM05D011628 ORTHO05D014769 2.6e-07 61.2 59 55.9
BolC9t56002H Brassica oleracea HOM05D005523 ORTHO05D007089 3.3e-07 60.8 107 41.1
Peaxi162Scf00166g00047 Petunia axillaris HOM05D003787 ORTHO05D001736 3.3e-07 60.8 213 30.5
Sopen02g033550 Solanum pennellii HOM05D003787 ORTHO05D001736 3.3e-07 60.8 76 47.4
VMungo0464G0106 Vigna mungo HOM05D003787 ORTHO05D001736 3.3e-07 60.8 107 39.3
Rhsim12G0148600 Rhododendron simsii HOM05D006637 ORTHO05D001736 4.4e-07 60.5 92 45.7
SGA_v2.0_scaffold154G37113 Striga asiatica HOM05D003787 ORTHO05D001736 4.4e-07 60.5 145 35.2
vmacro18147 Vaccinium macrocarpon HOM05D003787 ORTHO05D001736 4.4e-07 60.5 146 37.0
Ah.02g126850 Amaranthus hybridus HOM05D003787 ORTHO05D001736 5.7e-07 60.1 119 35.3
Carub.0005s0277 Capsella rubella HOM05D003787 ORTHO05D001736 5.7e-07 60.1 84 50.0
Ciclev10023416m.g Citrus clementina HOM05D006637 ORTHO05D001736 5.7e-07 60.1 65 53.8
MELO3C017227.2 Cucumis melo HOM05D006637 ORTHO05D001736 5.7e-07 60.1 116 38.8
Dinv22776 Davidia involucrata HOM05D006637 ORTHO05D001736 5.7e-07 60.1 89 48.3
Lalb_Chr02g0158901 Lupinus albus HOM05D003787 ORTHO05D001736 5.7e-07 60.1 82 46.3
BcaB07g30663 Brassica carinata HOM05D003787 ORTHO05D001736 7.4e-07 59.7 118 37.3
CiPaw.04G055500 Carya illinoinensis HOM05D003787 ORTHO05D001736 7.4e-07 59.7 155 34.2
CsaV3_5G038510 Cucumis sativus L. HOM05D003787 ORTHO05D001736 7.4e-07 59.7 80 46.2
Rhsim08G0075000 Rhododendron simsii HOM05D003787 ORTHO05D001736 7.4e-07 59.7 61 50.8
Solyc03g059470.1 Solanum lycopersicum HOM05D003787 ORTHO05D001736 7.4e-07 59.7 57 52.6
TWI60G0888 Tripterygium wilfordii HOM05D003787 ORTHO05D001736 7.4e-07 59.7 146 37.0
Eucgr.I02036 Eucalyptus grandis HOM05D003787 ORTHO05D001736 9.7e-07 59.3 180 28.9
Lj2g0021607 Lotus japonicus HOM05D003787 ORTHO05D001736 9.7e-07 59.3 117 38.5
MBI19_g14007_MAGBIO Magnolia biondii HOM05D006637 ORTHO05D001736 9.7e-07 59.3 172 34.9
SalBow2G2473 Salvia bowleyana HOM05D011975 ORTHO05D001736 9.7e-07 59.3 162 31.5
Solyc02g088840.3 Solanum lycopersicum HOM05D003787 ORTHO05D001736 9.7e-07 59.3 119 38.7
Manes.02G055200 Manihot esculenta HOM05D003787 ORTHO05D001736 1.3e-06 58.9 117 37.6
PGSC0003DMG400001359 Solanum tuberosum HOM05D003787 ORTHO05D001736 1.3e-06 58.9 118 36.4
Atru.chr8.428 Acer truncatum HOM05D003787 ORTHO05D001736 1.7e-06 58.5 116 39.7
Aa31LG2G7040 Aethionema arabicum HOM05D003787 ORTHO05D001736 1.7e-06 58.5 95 40.0
Aqoxy3G00509 Aquilegia oxysepala HOM05D006637 ORTHO05D001736 1.7e-06 58.5 172 31.4
Rhsim10G0049700 Rhododendron simsii HOM05D003787 ORTHO05D001736 1.7e-06 58.5 73 49.3
Sc10g0009690 Simmondsia chinensis HOM05D006637 ORTHO05D001736 1.7e-06 58.5 117 41.9
vmacro16493 Vaccinium macrocarpon HOM05D006637 ORTHO05D001736 1.7e-06 58.5 120 41.7
Cpa.g.sc14.178 Carica papaya HOM05D003787 ORTHO05D001736 2.2e-06 58.2 45 62.2
ClCG06G015610 Citrullus lanatus HOM05D006637 ORTHO05D001736 2.2e-06 58.2 116 39.7
Gorai.013G094300 Gossypium raimondii HOM05D003787 ORTHO05D001736 2.2e-06 58.2 171 31.6
Lalb_Chr06g0174951 Lupinus albus HOM05D003787 ORTHO05D001736 2.2e-06 58.2 81 49.4
MD06G1225400 Malus domestica HOM05D006637 ORTHO05D001736 2.2e-06 58.2 127 40.2
Os07g0298100 Oryza sativa ssp. japonica HOM05D003787 ORTHO05D001736 2.8e-06 57.8 85 43.5
CANSAT64G1049 Cannabis sativa HOM05D003787 ORTHO05D001736 3.7e-06 57.4 47 57.4
MELO3C022033.2 Cucumis melo HOM05D003787 ORTHO05D001736 3.7e-06 57.4 80 43.8
ECA238G2630 Erigeron canadensis HOM05D003787 ORTHO05D001736 3.7e-06 57.4 137 36.5
PGSC0003DMG400012377 Solanum tuberosum HOM05D003787 ORTHO05D001736 3.7e-06 57.4 100 39.0
AT2G03630 Arabidopsis thaliana HOM05D003787 ORTHO05D001736 4.8e-06 57.0 120 39.2
BcaC04g21469 Brassica carinata HOM05D000070 ORTHO05D006344 4.8e-06 57.0 82 46.3
C09p31430 Brassica napus HOM05D000070 ORTHO05D006344 4.8e-06 57.0 82 46.3
ClCG11G004790 Citrullus lanatus HOM05D003787 ORTHO05D001736 4.8e-06 57.0 98 39.8
Cc00_g04710 Coffea canephora HOM05D006637 ORTHO05D001736 4.8e-06 57.0 88 43.2
Migut.K01274 Erythranthe guttata HOM05D003787 ORTHO05D001736 4.8e-06 57.0 90 40.0
Gohir.D13G082500 Gossypium hirsutum HOM05D003787 ORTHO05D001736 4.8e-06 57.0 175 30.9
MD14G1212300 Malus domestica HOM05D006637 ORTHO05D001736 4.8e-06 57.0 98 43.9
MD17G1059900 Malus domestica HOM05D003787 ORTHO05D001736 4.8e-06 57.0 123 39.0
PGSC0003DMG400017799 Solanum tuberosum HOM05D011975 ORTHO05D001736 4.8e-06 57.0 151 35.1
unitig_32.g11770 Utricularia gibba HOM05D003787 ORTHO05D001736 4.8e-06 57.0 76 47.4
AUR62003095 Chenopodium quinoa HOM05D000094 ORTHO05D002350 8.2e-06 56.2 149 32.9


User provided reference genes

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