Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14460 Striga asiatica HOM05D003672 ORTHO05D004121 1.8e-207 725.7 366 100.0
SalBow2G2767 Salvia bowleyana HOM05D003672 ORTHO05D004121 1.0e-42 178.3 463 34.8
Migut.L01189 Erythranthe guttata HOM05D003672 ORTHO05D004121 2.2e-40 170.6 404 37.4
Dinv34068 Davidia involucrata HOM05D003672 ORTHO05D004121 1.0e-21 108.6 215 39.1
Oeu004585.2 Olea europaea HOM05D003672 ORTHO05D004121 1.3e-21 108.2 234 36.8
TAR629G1848 Trochodendron aralioides HOM05D003672 ORTHO05D004121 1.9e-20 104.4 212 38.2
TAR629G0952 Trochodendron aralioides HOM05D003672 ORTHO05D004121 3.3e-20 103.6 212 38.2
Actinidia31938 Actinidia chinensis HOM05D003672 ORTHO05D004121 5.6e-20 102.8 447 28.2
Sabra08G0072400 Salix brachista HOM05D003672 ORTHO05D004121 2.1e-19 100.9 190 40.0
Dinv22781 Davidia involucrata HOM05D003672 ORTHO05D004121 1.4e-18 98.2 241 32.8
Lj5C102T25 Lonicera japonica HOM05D003672 ORTHO05D004121 1.4e-18 98.2 231 33.8
Rhsim12G0074700 Rhododendron simsii HOM05D003672 ORTHO05D004121 4.0e-18 96.7 159 44.0
Rhsim12G0075200 Rhododendron simsii HOM05D003672 ORTHO05D004121 4.0e-18 96.7 159 43.4
Lsat_1_v5_gn_4_111040 Lactuca sativa HOM05D003672 ORTHO05D004121 8.9e-18 95.5 423 28.6
GSVIVG01012221001 Vitis vinifera HOM05D003672 ORTHO05D004121 3.4e-17 93.6 210 36.7
HanXRQChr09g0270231 Helianthus annuus HOM05D003672 ORTHO05D004121 1.3e-16 91.7 470 28.1
HanXRQChr16g0502451 Helianthus annuus HOM05D003672 ORTHO05D004121 3.8e-16 90.1 459 27.5
CSS0037619 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D004121 6.4e-16 89.4 252 32.1
Nn3g17451 Nelumbo nucifera HOM05D003672 ORTHO05D004121 6.4e-16 89.4 212 36.3
arahy.Tifrunner.gnm1.ann1.03S8MC Arachis hypogaea HOM05D003672 ORTHO05D004121 1.1e-15 88.6 213 36.2
ECA232G2426 Erigeron canadensis HOM05D003672 ORTHO05D004121 1.9e-15 87.8 476 26.3
Peaxi162Scf00175g00022 Petunia axillaris HOM05D003672 ORTHO05D004121 2.4e-15 87.4 375 28.0
arahy.Tifrunner.gnm1.ann1.R6LVKU Arachis hypogaea HOM05D003672 ORTHO05D004121 4.2e-15 86.7 213 35.7
Potri.008G096100 Populus trichocarpa HOM05D003672 ORTHO05D004121 5.4e-15 86.3 196 35.2
Solyc05g012230.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 4.6e-14 83.2 344 27.0
BraA10t44910Z Brassica rapa HOM05D003672 ORTHO05D004121 7.8e-14 82.4 385 25.7
A10p28610 Brassica napus HOM05D003672 ORTHO05D004121 1.3e-13 81.6 373 25.5
AL8G37700 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.7e-13 81.3 444 23.9
Lsat_1_v5_gn_8_46340 Lactuca sativa HOM05D003672 ORTHO05D004121 2.3e-13 80.9 402 25.4
Atru.chr9.577 Acer truncatum HOM05D003672 ORTHO05D004121 3.9e-13 80.1 247 31.6
Gohir.A12G182700 Gossypium hirsutum HOM05D003672 ORTHO05D004121 5.1e-13 79.7 209 34.9
FvH4_5g13830 Fragaria vesca HOM05D003672 ORTHO05D004121 6.6e-13 79.3 245 31.8
FAN18G3332 Fragaria x ananassa HOM05D003672 ORTHO05D004121 6.6e-13 79.3 245 31.8
Actinidia18990 Actinidia chinensis HOM05D003672 ORTHO05D004121 1.9e-12 77.8 255 32.2
Nitab4.5_0000231g0260 Nicotiana tabacum HOM05D003672 ORTHO05D004121 1.9e-12 77.8 205 32.2
Peaxi162Scf00201g00329 Petunia axillaris HOM05D003672 ORTHO05D004121 1.9e-12 77.8 206 33.5
AT5G61040 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 3.3e-12 77.0 440 24.1
Nitab4.5_0009401g0050 Nicotiana tabacum HOM05D003672 ORTHO05D004121 3.3e-12 77.0 239 31.4
Atru.chr11.1624 Acer truncatum HOM05D003672 ORTHO05D004121 4.3e-12 76.6 206 33.5
Aa31LG11G2260 Aethionema arabicum HOM05D003672 ORTHO05D004121 4.3e-12 76.6 396 26.0
DCAR_023172 Daucus carota HOM05D003672 ORTHO05D004121 4.3e-12 76.6 231 30.3
Thecc.03G101900 Theobroma cacao HOM05D003672 ORTHO05D004121 4.3e-12 76.6 208 31.7
Cpa.g.sc94.57 Carica papaya HOM05D003672 ORTHO05D004121 5.6e-12 76.3 183 36.1
Ca_14345_v3 Cicer arietinum L. HOM05D003672 ORTHO05D004121 5.6e-12 76.3 196 33.2
Gorai.008G199200 Gossypium raimondii HOM05D003672 ORTHO05D004121 7.3e-12 75.9 209 34.0
QL03p074101 Quercus lobata HOM05D003672 ORTHO05D004121 7.3e-12 75.9 156 35.9
Rhsim12G0148200 Rhododendron simsii HOM05D003672 ORTHO05D004121 7.3e-12 75.9 216 31.5
Manes.14G085800 Manihot esculenta HOM05D003672 ORTHO05D004121 9.6e-12 75.5 214 32.2
Nitab4.5_0001485g0140 Nicotiana tabacum HOM05D003672 ORTHO05D004121 9.6e-12 75.5 239 31.0
AL6G18360 Arabidopsis lyrata HOM05D003672 ORTHO05D004121 1.3e-11 75.1 374 24.3
PGR083G2392 Punica granatum HOM05D003672 ORTHO05D004121 1.3e-11 75.1 323 26.6
BraA03t13796Z Brassica rapa HOM05D003672 ORTHO05D004121 2.1e-11 74.3 427 25.8
Duzib205G1655 Durio zibethinus HOM05D003672 ORTHO05D004121 2.1e-11 74.3 207 31.4
Eucgr.B00592 Eucalyptus grandis HOM05D003672 ORTHO05D004121 2.1e-11 74.3 201 32.3
Thhalv10003875m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 2.1e-11 74.3 451 23.9
Sp2g24340 Schrenkiella parvula HOM05D003672 ORTHO05D004121 2.1e-11 74.3 425 23.3
Gorai.001G077200 Gossypium raimondii HOM05D003672 ORTHO05D004121 2.8e-11 73.9 203 34.0
Carub.0008s2173 Capsella rubella HOM05D003672 ORTHO05D004121 3.6e-11 73.6 455 25.1
Manes.01G028000 Manihot esculenta HOM05D003672 ORTHO05D004121 3.6e-11 73.6 197 33.0
Eucgr.B03149 Eucalyptus grandis HOM05D003672 ORTHO05D004121 4.8e-11 73.2 202 31.7
PGR102G2240 Punica granatum HOM05D003672 ORTHO05D004121 4.8e-11 73.2 211 31.8
Cc11_g11950 Coffea canephora HOM05D003672 ORTHO05D004121 6.2e-11 72.8 213 32.9
THA.LOC104819401 Tarenaya hassleriana HOM05D003672 ORTHO05D004121 6.2e-11 72.8 209 34.0
FAN13G1740 Fragaria x ananassa HOM05D003672 ORTHO05D004121 1.1e-10 72.0 245 30.2
Gohir.D12G185800 Gossypium hirsutum HOM05D003672 ORTHO05D004121 1.1e-10 72.0 209 33.0
Oeu044870.1 Olea europaea HOM05D003672 ORTHO05D004121 1.1e-10 72.0 226 31.4
Manes.06G084700 Manihot esculenta HOM05D003672 ORTHO05D004121 1.8e-10 71.2 201 28.9
MSTRG.22965 Avicennia marina HOM05D003672 ORTHO05D004121 2.4e-10 70.9 216 31.9
Migut.D01656 Erythranthe guttata HOM05D003672 ORTHO05D004121 2.4e-10 70.9 286 28.0
Glyma.06G203700 Glycine max HOM05D003672 ORTHO05D004121 2.4e-10 70.9 343 25.1
Nn4g23428 Nelumbo nucifera HOM05D003672 ORTHO05D004121 2.4e-10 70.9 206 31.6
VMungo0331G1159 Vigna mungo HOM05D003672 ORTHO05D004121 2.4e-10 70.9 206 30.1
CDE04G0191 Ceratophyllum demersum HOM05D003672 ORTHO05D004121 3.1e-10 70.5 225 31.1
Prupe.5G205200 Prunus persica HOM05D003672 ORTHO05D004121 3.1e-10 70.5 217 32.3
CARHR274750 Cardamine hirsuta HOM05D003672 ORTHO05D004121 4.0e-10 70.1 226 30.1
Thhalv10013089m.g Eutrema salsugineum HOM05D003672 ORTHO05D004121 4.0e-10 70.1 408 23.3
Lj1g0027425 Lotus japonicus HOM05D003672 ORTHO05D004121 4.0e-10 70.1 244 29.9
Sopen03g034170 Solanum pennellii HOM05D003672 ORTHO05D004121 4.0e-10 70.1 239 30.1
Gohir.A07G068500 Gossypium hirsutum HOM05D003672 ORTHO05D004121 5.3e-10 69.7 217 31.8
Gohir.D07G073000 Gossypium hirsutum HOM05D003672 ORTHO05D004121 5.3e-10 69.7 203 33.0
HanXRQChr12g0363081 Helianthus annuus HOM05D003672 ORTHO05D004121 5.3e-10 69.7 371 25.3
Actinidia35037 Actinidia chinensis HOM05D003672 ORTHO05D004121 6.9e-10 69.3 239 31.0
Ciclev10019089m.g Citrus clementina HOM05D003672 ORTHO05D004121 6.9e-10 69.3 256 30.1
MSTRG.7745 Avicennia marina HOM05D003672 ORTHO05D004121 9.0e-10 68.9 120 36.7
Haze_07732 Corylus avellana HOM05D003672 ORTHO05D004121 9.0e-10 68.9 171 34.5
Haze_11907 Corylus avellana HOM05D003672 ORTHO05D004121 9.0e-10 68.9 321 25.9
QL03p074186 Quercus lobata HOM05D003672 ORTHO05D004121 1.2e-09 68.6 139 36.0
TPR.G12189 Trifolium pratense HOM05D003672 ORTHO05D004121 1.2e-09 68.6 197 32.0
arahy.Tifrunner.gnm1.ann1.N0JE3Z Arachis hypogaea HOM05D003672 ORTHO05D004121 1.5e-09 68.2 217 30.9
Cc00_g14840 Coffea canephora HOM05D003672 ORTHO05D004121 1.5e-09 68.2 223 31.8
CsaV3_1G002930 Cucumis sativus L. HOM05D003672 ORTHO05D004121 1.5e-09 68.2 200 29.0
Duzib084G0362 Durio zibethinus HOM05D003672 ORTHO05D004121 1.5e-09 68.2 213 31.9
MD14G1212000 Malus domestica HOM05D003672 ORTHO05D004121 1.5e-09 68.2 213 33.3
Hma1.2p1_0060F.1_g033090 Hydrangea macrophylla HOM05D003672 ORTHO05D004121 2.0e-09 67.8 263 27.8
Nitab4.5_0009585g0010 Nicotiana tabacum HOM05D003672 ORTHO05D004121 2.0e-09 67.8 340 27.6
Potri.015G057600 Populus trichocarpa HOM05D003672 ORTHO05D004121 2.0e-09 67.8 210 32.9
CiPaw.05G125000 Carya illinoinensis HOM05D003672 ORTHO05D004121 2.6e-09 67.4 190 32.1
Oeu061164.2 Olea europaea HOM05D003672 ORTHO05D004121 2.6e-09 67.4 245 29.4
ClCG06G015630 Citrullus lanatus HOM05D003672 ORTHO05D004121 3.4e-09 67.0 278 26.6
TWI60G1197 Tripterygium wilfordii HOM05D003672 ORTHO05D004121 3.4e-09 67.0 209 31.6
BcaC06g33181 Brassica carinata HOM05D003672 ORTHO05D004121 4.5e-09 66.6 422 24.4
ATR0177G058 Amborella trichopoda HOM05D003672 ORTHO05D004121 5.8e-09 66.2 236 28.8
BolC9t59636H Brassica oleracea HOM05D003672 ORTHO05D004121 5.8e-09 66.2 394 24.1
arahy.Tifrunner.gnm1.ann1.SKH1UB Arachis hypogaea HOM05D003672 ORTHO05D004121 7.6e-09 65.9 217 30.4
Phvul.010G007200 Phaseolus vulgaris HOM05D003672 ORTHO05D004121 7.6e-09 65.9 206 29.6
Sopen05g007060 Solanum pennellii HOM05D003672 ORTHO05D004121 7.6e-09 65.9 340 26.5
Cfa019341 Carpinus fangiana HOM05D003672 ORTHO05D004121 9.9e-09 65.5 244 28.3
Sed0002350 Sechium edule HOM05D003672 ORTHO05D004121 1.3e-08 65.1 278 27.7
CANSAT80G1081 Cannabis sativa HOM05D003672 ORTHO05D004121 1.7e-08 64.7 212 31.1
BolC7t45002H Brassica oleracea HOM05D003672 ORTHO05D004121 2.2e-08 64.3 403 24.6
CiPaw.12G008500 Carya illinoinensis HOM05D003672 ORTHO05D004121 2.2e-08 64.3 248 29.0
Psat2g037720 Pisum sativum HOM05D003672 ORTHO05D004121 2.2e-08 64.3 197 32.0
C07p44780 Brassica napus HOM05D003672 ORTHO05D004121 3.8e-08 63.5 418 23.4
C09p68900 Brassica napus HOM05D003672 ORTHO05D004121 3.8e-08 63.5 395 23.8
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 3.8e-08 63.5 202 31.7
Lalb_Chr07g0178301 Lupinus albus HOM05D003672 ORTHO05D004121 3.8e-08 63.5 478 23.4
Hund02585 Selenicereus undatus HOM05D003672 ORTHO05D004121 4.9e-08 63.2 245 31.0
FAN08G3423 Fragaria x ananassa HOM05D003672 ORTHO05D004121 6.4e-08 62.8 264 27.7
Solyc03g115100.4 Solanum lycopersicum HOM05D003672 ORTHO05D004121 6.4e-08 62.8 239 28.9
PGSC0003DMG400028369 Solanum tuberosum HOM05D003672 ORTHO05D004121 6.4e-08 62.8 217 28.6
Aa31LG3G18520 Aethionema arabicum HOM05D003672 ORTHO05D004121 8.4e-08 62.4 440 24.1
EL10Ac5g11131 Beta vulgaris HOM05D003672 ORTHO05D004121 8.4e-08 62.4 265 27.9
Glyma.04G162600 Glycine max HOM05D003672 ORTHO05D004121 1.4e-07 61.6 205 29.3
COL.COLO4_06856 Corchorus olitorius HOM05D003672 ORTHO05D004121 3.2e-07 60.5 208 28.8
ECA233G1662 Erigeron canadensis HOM05D000677 ORTHO05D000727 3.2e-07 60.5 202 28.7
HPP92_000460 Vanilla planifolia HOM05D003672 ORTHO05D004121 3.2e-07 60.5 227 29.5
Aqoxy1G00151 Aquilegia oxysepala HOM05D003672 ORTHO05D004121 4.2e-07 60.1 218 29.4
CAN.G3169.1 Capsicum annuum HOM05D002946 ORTHO05D003299 4.2e-07 60.1 240 28.8
MELO3C017225.2 Cucumis melo HOM05D003672 ORTHO05D004121 2.7e-06 57.4 149 31.5
Lalb_Chr13g0302861 Lupinus albus HOM05D003672 ORTHO05D004121 3.5e-06 57.0 205 28.8
Actinidia19914 Actinidia chinensis HOM05D000020 ORTHO05D000156 4.6e-06 56.6 117 40.2
Ah.02g114040 Amaranthus hybridus HOM05D003672 ORTHO05D004121 4.6e-06 56.6 139 30.2
Ah.11g047770 Amaranthus hybridus HOM05D003672 ORTHO05D004121 6.0e-06 56.2 140 32.1
AT5G08010 Arabidopsis thaliana HOM05D003672 ORTHO05D004121 6.0e-06 56.2 373 22.8
CiPaw.11G053900 Carya illinoinensis HOM05D003672 ORTHO05D004121 6.0e-06 56.2 240 28.3
Medtr3g025870 Medicago truncatula HOM05D003672 ORTHO05D004121 6.0e-06 56.2 191 28.3
Sc12g0007260 Simmondsia chinensis HOM05D003672 ORTHO05D004121 6.0e-06 56.2 143 35.0
VMungo1215G2632 Vigna mungo HOM05D003672 ORTHO05D004121 7.9e-06 55.8 130 36.2


User provided reference genes

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