Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14435 Striga asiatica HOM05D002953 ORTHO05D003249 3.2e-108 395.6 283 100.0
Migut.L01214 Erythranthe guttata HOM05D002953 ORTHO05D003249 3.1e-34 149.8 324 50.6
SalBow2G1905 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.8e-27 125.9 294 46.6
SalBow2G2783 Salvia bowleyana HOM05D002953 ORTHO05D003249 4.8e-27 125.9 294 46.6
Actinidia19918 Actinidia chinensis HOM05D002953 ORTHO05D003249 4.2e-23 112.8 285 34.4
Rhsim12G0076400 Rhododendron simsii HOM05D002953 ORTHO05D003249 3.0e-21 106.7 338 35.2
unitig_8.g3188 Utricularia gibba HOM05D002953 ORTHO05D003249 1.9e-20 104.0 300 32.7
Nitab4.5_0000014g0320 Nicotiana tabacum HOM05D002953 ORTHO05D003249 5.7e-20 102.4 292 30.5
TWI75G0656 Tripterygium wilfordii HOM05D002953 ORTHO05D003249 9.7e-20 101.7 295 30.2
TAR622G0728 Trochodendron aralioides HOM05D002953 ORTHO05D003249 3.7e-19 99.8 280 31.8
Oeu016226.1 Olea europaea HOM05D002953 ORTHO05D003249 6.3e-19 99.0 322 32.0
Glyma.01G056000 Glycine max HOM05D002953 ORTHO05D003249 1.4e-18 97.8 282 29.4
Atru.chr11.1683 Acer truncatum HOM05D002953 ORTHO05D003249 4.1e-18 96.3 312 27.9
CANSAT64G0943 Cannabis sativa HOM05D002953 ORTHO05D003249 4.1e-18 96.3 304 29.3
Lj6C782G17 Lonicera japonica HOM05D002953 ORTHO05D003249 4.1e-18 96.3 289 34.6
CSS0004001 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 9.0e-18 95.1 282 30.9
Cc11_g12310 Coffea canephora HOM05D002953 ORTHO05D003249 4.5e-17 92.8 297 37.7
vmacro01327 Vaccinium macrocarpon HOM05D002953 ORTHO05D003249 4.5e-17 92.8 168 48.8
Sopen04g001490 Solanum pennellii HOM05D002953 ORTHO05D003249 7.7e-17 92.0 280 28.6
VMungo1215G1853 Vigna mungo HOM05D002953 ORTHO05D003249 1.7e-16 90.9 278 31.3
Haze_11930 Corylus avellana HOM05D002953 ORTHO05D003249 2.2e-16 90.5 288 35.1
Lalb_Chr17g0341061 Lupinus albus HOM05D002953 ORTHO05D003249 2.2e-16 90.5 297 27.3
SGA_v2.0_scaffold16G07764 Striga asiatica HOM05D002953 ORTHO05D003249 5.0e-16 89.4 127 45.7
DCAR_007182 Daucus carota HOM05D002953 ORTHO05D003249 1.1e-15 88.2 313 41.5
Peaxi162Scf00314g00019 Petunia axillaris HOM05D002953 ORTHO05D003249 1.9e-15 87.4 282 30.1
Ciclev10033969m.g Citrus clementina HOM05D002953 ORTHO05D003249 3.2e-15 86.7 332 28.6
Peaxi162Scf00187g01311 Petunia axillaris HOM05D002953 ORTHO05D003249 1.6e-14 84.3 282 29.8
Nitab4.5_0002806g0030 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.1e-14 84.0 287 28.9
PSO478G1910 Papaver somniferum HOM05D002953 ORTHO05D003249 2.7e-14 83.6 326 31.0
CiPaw.06G090600 Carya illinoinensis HOM05D002953 ORTHO05D003249 4.6e-14 82.8 303 34.0
Nn3g17381 Nelumbo nucifera HOM05D002953 ORTHO05D003249 6.1e-14 82.4 295 27.5
Sabra10G0122400 Salix brachista HOM05D002953 ORTHO05D003249 1.0e-13 81.6 274 28.5
PSO017G2547 Papaver somniferum HOM05D002953 ORTHO05D003249 1.4e-13 81.3 325 32.6
Aqoxy3G00465 Aquilegia oxysepala HOM05D002953 ORTHO05D003249 1.8e-13 80.9 277 32.1
Medtr4g082910 Medicago truncatula HOM05D002953 ORTHO05D003249 3.0e-13 80.1 328 28.7
QL03p071046 Quercus lobata HOM05D002953 ORTHO05D003249 1.1e-12 78.2 297 25.6
ECA246G1271 Erigeron canadensis HOM05D000773 ORTHO05D000588 1.5e-12 77.8 171 35.7
Potri.008G093300 Populus trichocarpa HOM05D002953 ORTHO05D003249 1.5e-12 77.8 314 26.8
Solyc04g005470.3 Solanum lycopersicum HOM05D002953 ORTHO05D003249 1.5e-12 77.8 313 26.8
CiPaw.05G127400 Carya illinoinensis HOM05D002953 ORTHO05D003249 3.3e-12 76.6 296 28.0
CARHR014290 Cardamine hirsuta HOM05D002953 ORTHO05D003249 5.7e-12 75.9 310 29.7
Hma1.2p1_0357F.1_g134470 Hydrangea macrophylla HOM05D002953 ORTHO05D003249 5.7e-12 75.9 286 41.3
Glyma.02G114300 Glycine max HOM05D002953 ORTHO05D003249 9.7e-12 75.1 268 28.7
CsaV3_1G005800 Cucumis sativus L. HOM05D002953 ORTHO05D003249 1.3e-11 74.7 279 26.9
Dinv16709 Davidia involucrata HOM05D002953 ORTHO05D003249 1.7e-11 74.3 200 30.5
TPR.G24432 Trifolium pratense HOM05D002953 ORTHO05D003249 2.2e-11 73.9 287 27.9
MD13G1065400 Malus domestica HOM05D002953 ORTHO05D003249 4.8e-11 72.8 168 32.7
Potri.010G160900 Populus trichocarpa HOM05D002953 ORTHO05D003249 4.8e-11 72.8 283 27.2
Sp1g12040 Schrenkiella parvula HOM05D002953 ORTHO05D003249 4.8e-11 72.8 314 27.1
Nitab4.5_0004304g0070 Nicotiana tabacum HOM05D000954 ORTHO05D000822 6.3e-11 72.4 283 27.6
Migut.E00059 Erythranthe guttata HOM05D002953 ORTHO05D003249 8.2e-11 72.0 326 37.1
FAN07G2390 Fragaria x ananassa HOM05D000954 ORTHO05D000822 1.4e-10 71.2 301 25.9
Lsat_1_v5_gn_4_12001 Lactuca sativa HOM05D002953 ORTHO05D003249 1.4e-10 71.2 277 26.7
FAN22G1160 Fragaria x ananassa HOM05D000954 ORTHO05D003249 2.4e-10 70.5 297 26.3
Glyma.20G027100 Glycine max HOM05D002953 ORTHO05D003249 2.4e-10 70.5 171 35.1
BcaB03g13124 Brassica carinata HOM05D002953 ORTHO05D003249 3.1e-10 70.1 309 32.0
Sed0013431 Sechium edule HOM05D002953 ORTHO05D003249 3.1e-10 70.1 279 26.9
Glyma.07G226700 Glycine max HOM05D002953 ORTHO05D003249 4.1e-10 69.7 118 39.0
PGR102G2110 Punica granatum HOM05D002953 ORTHO05D003249 5.3e-10 69.3 107 40.2
VMungo0251G2769 Vigna mungo HOM05D002953 ORTHO05D003249 5.3e-10 69.3 313 28.1
THA.LOC104807117 Tarenaya hassleriana HOM05D002953 ORTHO05D003249 6.9e-10 68.9 299 31.8
HanXRQChr12g0375351 Helianthus annuus HOM05D002953 ORTHO05D003249 1.2e-09 68.2 283 32.5
Thecc.02G335300 Theobroma cacao HOM05D002953 ORTHO05D003249 1.2e-09 68.2 299 24.1
BraA06t24181Z Brassica rapa HOM05D002953 ORTHO05D003249 1.5e-09 67.8 299 35.8
AL1G25750 Arabidopsis lyrata HOM05D002953 ORTHO05D003249 2.6e-09 67.0 307 30.9
Lalb_Chr16g0385611 Lupinus albus HOM05D002953 ORTHO05D003249 2.6e-09 67.0 323 38.7
Carub.0001s1362 Capsella rubella HOM05D002953 ORTHO05D003249 3.4e-09 66.6 309 32.0
CDE10G0450 Ceratophyllum demersum HOM05D002953 ORTHO05D003249 4.5e-09 66.2 285 26.7
Medtr5g043690 Medicago truncatula HOM05D002953 ORTHO05D003249 4.5e-09 66.2 285 26.0
A06p09930 Brassica napus HOM05D002953 ORTHO05D003249 5.9e-09 65.9 297 36.7
Phvul.002G068600 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 5.9e-09 65.9 197 32.0
Duzib205G1659 Durio zibethinus HOM05D002953 ORTHO05D003249 7.7e-09 65.5 137 31.4
Nitab4.5_0000334g0300 Nicotiana tabacum HOM05D000954 ORTHO05D000822 7.7e-09 65.5 308 26.9
Phvul.002G168100 Phaseolus vulgaris HOM05D002953 ORTHO05D003249 7.7e-09 65.5 292 26.0
TPR.G34076 Trifolium pratense HOM05D002953 ORTHO05D003249 7.7e-09 65.5 315 25.7
TAR371G0440 Trochodendron aralioides HOM05D002953 ORTHO05D003249 7.7e-09 65.5 303 26.7
BcaC05g25290 Brassica carinata HOM05D002953 ORTHO05D003249 1.0e-08 65.1 282 29.1
MELO3C002011.2 Cucumis melo HOM05D002953 ORTHO05D003249 1.0e-08 65.1 181 28.2
ClCG04G011980 Citrullus lanatus HOM05D002953 ORTHO05D003249 1.3e-08 64.7 282 26.6
C05p11700 Brassica napus HOM05D002953 ORTHO05D003249 2.2e-08 63.9 302 31.1
BolC5t29917H Brassica oleracea HOM05D002953 ORTHO05D003249 2.2e-08 63.9 302 31.1
MD06G1199500 Malus domestica HOM05D002953 ORTHO05D003249 2.2e-08 63.9 160 30.0
Psat7g135400 Pisum sativum HOM05D002953 ORTHO05D003249 2.2e-08 63.9 309 26.2
SGA_v2.0_scaffold28G11759 Striga asiatica HOM05D004749 ORTHO05D005995 2.2e-08 63.9 131 39.7
Gohir.D02G128400 Gossypium hirsutum HOM05D002953 ORTHO05D003249 2.9e-08 63.5 114 36.0
Gorai.005G144100 Gossypium raimondii HOM05D002953 ORTHO05D003249 2.9e-08 63.5 114 36.0
Ca_18812_v3 Cicer arietinum L. HOM05D002953 ORTHO05D003249 3.8e-08 63.2 108 45.4
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 5.0e-08 62.8 306 28.8
MSTRG.737 Avicennia marina HOM05D002953 ORTHO05D003249 5.0e-08 62.8 81 50.6
FvH4_5g14350 Fragaria vesca HOM05D002953 ORTHO05D003249 5.0e-08 62.8 156 28.8
Oeu048151.2 Olea europaea HOM05D002953 ORTHO05D003249 5.0e-08 62.8 41 73.2
Nn4g23349 Nelumbo nucifera HOM05D002953 ORTHO05D003249 6.5e-08 62.4 290 25.5
Gohir.A03G103200 Gossypium hirsutum HOM05D002953 ORTHO05D003249 8.5e-08 62.0 114 35.1
arahy.Tifrunner.gnm1.ann1.FH6P3F Arachis hypogaea HOM05D002953 ORTHO05D003249 1.1e-07 61.6 300 31.0
A08p32200 Brassica napus HOM05D002953 ORTHO05D003249 1.1e-07 61.6 312 26.3
BraA08t35143Z Brassica rapa HOM05D002953 ORTHO05D003249 1.1e-07 61.6 312 26.3
Lj4g0014446 Lotus japonicus HOM05D002953 ORTHO05D003249 1.1e-07 61.6 340 26.2
Medtr3g023650 Medicago truncatula HOM05D002953 ORTHO05D003249 1.1e-07 61.6 106 32.1
MD14G1208100 Malus domestica HOM05D002953 ORTHO05D003249 1.4e-07 61.2 108 50.0
Sopen05g007380 Solanum pennellii HOM05D002953 ORTHO05D003249 1.4e-07 61.2 366 24.6
Thecc.03G096500 Theobroma cacao HOM05D002953 ORTHO05D003249 1.4e-07 61.2 124 33.1
arahy.Tifrunner.gnm1.ann1.GA8N54 Arachis hypogaea HOM05D002953 ORTHO05D003249 1.9e-07 60.8 284 30.3
MD16G1063900 Malus domestica HOM05D002953 ORTHO05D003249 1.9e-07 60.8 153 32.7
RcHm_v2.0_Chr7g0182351 Rosa chinensis HOM05D002953 ORTHO05D003249 1.9e-07 60.8 106 33.0
Sp2g24510 Schrenkiella parvula HOM05D002953 ORTHO05D003249 1.9e-07 60.8 269 23.0
BolC8t49262H Brassica oleracea HOM05D002953 ORTHO05D003249 2.5e-07 60.5 318 24.5
COL.COLO4_27923 Corchorus olitorius HOM05D002953 ORTHO05D003249 3.2e-07 60.1 318 24.5
Gohir.D07G074100 Gossypium hirsutum HOM05D002953 ORTHO05D003249 3.2e-07 60.1 107 32.7
Gorai.001G078300 Gossypium raimondii HOM05D002953 ORTHO05D003249 3.2e-07 60.1 107 33.6
Prupe.1G282700 Prunus persica HOM05D002953 ORTHO05D003249 4.2e-07 59.7 294 32.7
BcaC07g38708 Brassica carinata HOM05D002953 ORTHO05D003249 5.5e-07 59.3 308 24.7
COL.COLO4_36882 Corchorus olitorius HOM05D002953 ORTHO05D003249 5.5e-07 59.3 292 21.2
Lj1g0024895 Lotus japonicus HOM05D002953 ORTHO05D003249 7.2e-07 58.9 179 25.1
Sc11g0002310 Simmondsia chinensis HOM05D002953 ORTHO05D003249 7.2e-07 58.9 144 45.1
C08p16380 Brassica napus HOM05D002953 ORTHO05D003249 9.4e-07 58.5 308 24.7
Peaxi162Scf00013g00538 Petunia axillaris HOM05D002953 ORTHO05D003249 9.4e-07 58.5 136 30.9
QL10p018596 Quercus lobata HOM05D002953 ORTHO05D003249 9.4e-07 58.5 284 24.6
Gohir.D12G183000 Gossypium hirsutum HOM05D002953 ORTHO05D003249 1.6e-06 57.8 107 31.8
Gorai.008G196300 Gossypium raimondii HOM05D002953 ORTHO05D003249 1.6e-06 57.8 107 31.8
SalBow5G1999 Salvia bowleyana HOM05D002953 ORTHO05D003249 1.6e-06 57.8 137 30.7
Gohir.A12G180300 Gossypium hirsutum HOM05D002953 ORTHO05D003249 2.1e-06 57.4 107 31.8
Lsat_1_v5_gn_3_56140 Lactuca sativa HOM05D002953 ORTHO05D003249 2.1e-06 57.4 302 24.5
CAN.G587.22 Capsicum annuum HOM05D002953 ORTHO05D003249 2.7e-06 57.0 130 31.5
DCAR_026019 Daucus carota HOM05D002953 ORTHO05D003249 2.7e-06 57.0 277 24.2
Duzib068G0795 Durio zibethinus HOM05D002953 ORTHO05D003249 2.7e-06 57.0 106 34.0
Nitab4.5_0001688g0010 Nicotiana tabacum HOM05D002953 ORTHO05D003249 2.7e-06 57.0 151 31.1
Solyc06g069590.3 Solanum lycopersicum HOM05D002953 ORTHO05D003249 2.7e-06 57.0 151 30.5
Nitab4.5_0006673g0090 Nicotiana tabacum HOM05D002953 ORTHO05D003249 3.6e-06 56.6 129 31.0
Thhalv10009533m.g Eutrema salsugineum HOM05D002953 ORTHO05D003249 4.7e-06 56.2 317 29.3
Prupe.5G200200 Prunus persica HOM05D002953 ORTHO05D003249 4.7e-06 56.2 105 32.4
CSS0035960 Camellia sinensis var. sinensis HOM05D002953 ORTHO05D003249 6.1e-06 55.8 276 24.6
Eucgr.B00564 Eucalyptus grandis HOM05D002953 ORTHO05D003249 6.1e-06 55.8 272 25.4
Actinidia19011 Actinidia chinensis HOM05D002953 ORTHO05D003249 7.9e-06 55.5 279 25.1
Cpa.g.sc1.99 Carica papaya HOM05D002953 ORTHO05D003249 7.9e-06 55.5 41 65.9
Psat5g198520 Pisum sativum HOM05D002953 ORTHO05D003249 7.9e-06 55.5 269 24.9


User provided reference genes

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