Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14383 Striga asiatica HOM05D007068 ORTHO05D008590 3.3e-226 788.1 414 100.0
Migut.D01541 Erythranthe guttata HOM05D007068 ORTHO05D008590 4.3e-101 372.5 447 49.2
SalBow1G5613 Salvia bowleyana HOM05D007068 ORTHO05D008590 8.9e-99 364.8 413 52.1
Oeu031766.1 Olea europaea HOM05D007068 ORTHO05D008590 1.7e-81 307.4 449 44.1
CAN.G843.56 Capsicum annuum HOM05D007068 ORTHO05D008590 4.1e-67 259.6 432 41.2
PGSC0003DMG400005672 Solanum tuberosum HOM05D007068 ORTHO05D008590 2.9e-65 253.4 444 39.2
Solyc03g118700.3 Solanum lycopersicum HOM05D007068 ORTHO05D008590 1.9e-64 250.8 440 39.8
Nitab4.5_0003401g0040 Nicotiana tabacum HOM05D007068 ORTHO05D008590 4.2e-64 249.6 428 40.4
Nitab4.5_0004556g0050 Nicotiana tabacum HOM05D007068 ORTHO05D008590 2.1e-63 247.3 443 37.5
Peaxi162Scf00683g00453 Petunia axillaris HOM05D007068 ORTHO05D008590 3.6e-63 246.5 450 39.8
Dinv17551 Davidia involucrata HOM05D007068 ORTHO05D008590 9.7e-61 238.4 427 41.7
Cc04_g06260 Coffea canephora HOM05D007068 ORTHO05D008590 1.1e-59 235.0 458 39.5
CSS0009831 Camellia sinensis var. sinensis HOM05D007068 ORTHO05D008590 2.1e-55 220.7 438 38.4
Thecc.03G056900 Theobroma cacao HOM05D007068 ORTHO05D008590 2.7e-55 220.3 449 38.3
Cfa019656 Carpinus fangiana HOM05D007068 ORTHO05D008590 1.8e-54 217.6 442 36.4
Rhsim08G0124500 Rhododendron simsii HOM05D007068 ORTHO05D008590 3.9e-54 216.5 420 39.3
Hma1.2p1_0669F.1_g200120 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 8.8e-54 215.3 481 38.7
Peaxi162Scf00683g00454 Petunia axillaris HOM05D007068 ORTHO05D008590 1.5e-53 214.5 422 37.2
GSVIVG01011540001 Vitis vinifera HOM05D007068 ORTHO05D008590 6.3e-52 209.1 419 36.5
Ca_17189_v3 Cicer arietinum L. HOM05D007068 ORTHO05D008590 2.6e-50 203.8 435 36.3
Duzib084G0836 Durio zibethinus HOM05D007068 ORTHO05D008590 3.8e-49 199.9 450 36.7
CiPaw.16G093400 Carya illinoinensis HOM05D007068 ORTHO05D008590 8.5e-49 198.7 447 34.7
TAR622G0435 Trochodendron aralioides HOM05D007068 ORTHO05D008590 1.1e-48 198.4 486 35.0
COL.COLO4_04377 Corchorus olitorius HOM05D007068 ORTHO05D008590 1.4e-48 198.0 455 36.7
CANSAT80G0386 Cannabis sativa HOM05D007068 ORTHO05D008590 1.9e-48 197.6 421 36.1
Actinidia39838 Actinidia chinensis HOM05D007068 ORTHO05D008590 4.2e-48 196.4 460 35.2
Atru.chr9.1734 Acer truncatum HOM05D007068 ORTHO05D008590 1.2e-47 194.9 455 35.8
Eucgr.K02273 Eucalyptus grandis HOM05D007068 ORTHO05D008590 6.1e-47 192.6 458 35.2
Haze_18849 Corylus avellana HOM05D007068 ORTHO05D008590 7.9e-47 192.2 471 32.9
MELO3C017359.2 Cucumis melo HOM05D007068 ORTHO05D008590 7.9e-47 192.2 474 33.8
Medtr8g107330 Medicago truncatula HOM05D007068 ORTHO05D008590 3.9e-46 189.9 434 34.6
Nn3g18277 Nelumbo nucifera HOM05D007068 ORTHO05D008590 3.9e-46 189.9 517 31.5
Psat7g003560 Pisum sativum HOM05D007068 ORTHO05D008590 5.2e-46 189.5 435 35.4
Carub.0001s3769 Capsella rubella HOM05D007068 ORTHO05D008590 1.1e-45 188.3 459 34.6
ECA238G2622 Erigeron canadensis HOM05D007068 ORTHO05D008590 1.5e-45 188.0 428 36.7
arahy.Tifrunner.gnm1.ann1.N01HH5 Arachis hypogaea HOM05D007068 ORTHO05D008590 2.0e-45 187.6 327 41.3
Lalb_Chr16g0386991 Lupinus albus HOM05D007068 ORTHO05D008590 4.4e-45 186.4 446 34.3
Lj4g0019727 Lotus japonicus HOM05D007068 ORTHO05D008590 5.7e-45 186.0 423 34.8
AL1G55220 Arabidopsis lyrata HOM05D007068 ORTHO05D008590 1.3e-44 184.9 461 33.6
Aqoxy3G00060 Aquilegia oxysepala HOM05D007068 ORTHO05D008590 2.2e-44 184.1 448 35.5
A06p04350 Brassica napus HOM05D007068 ORTHO05D008590 2.8e-44 183.7 441 34.2
Sp1g35530 Schrenkiella parvula HOM05D007068 ORTHO05D008590 2.8e-44 183.7 450 33.3
Prupe.5G233500 Prunus persica HOM05D007068 ORTHO05D008590 1.4e-43 181.4 460 32.6
C06p03180 Brassica napus HOM05D007068 ORTHO05D008590 5.3e-43 179.5 444 33.3
CsaV3_1G004370 Cucumis sativus L. HOM05D007068 ORTHO05D008590 5.3e-43 179.5 473 33.2
CARHR038180 Cardamine hirsuta HOM05D007068 ORTHO05D008590 7.0e-43 179.1 451 31.5
Gohir.A07G061700 Gossypium hirsutum HOM05D007068 ORTHO05D008590 7.0e-43 179.1 439 33.9
Sed0003101 Sechium edule HOM05D007068 ORTHO05D008590 7.0e-43 179.1 485 32.0
Gohir.D07G066400 Gossypium hirsutum HOM05D007068 ORTHO05D008590 3.5e-42 176.8 442 34.6
PSO478G2297 Papaver somniferum HOM05D007068 ORTHO05D008590 3.5e-42 176.8 464 32.1
AT1G48580 Arabidopsis thaliana HOM05D007068 ORTHO05D008590 1.0e-41 175.3 468 32.1
Gorai.001G070000 Gossypium raimondii HOM05D007068 ORTHO05D008590 1.0e-41 175.3 444 34.5
QL10p029594 Quercus lobata HOM05D007068 ORTHO05D008590 1.0e-41 175.3 413 33.2
TPR.G1401 Trifolium pratense HOM05D007068 ORTHO05D008590 1.0e-41 175.3 457 32.2
Thhalv10011472m.g Eutrema salsugineum HOM05D007068 ORTHO05D008590 2.2e-41 174.1 459 32.0
Lsat_1_v5_gn_2_14700 Lactuca sativa HOM05D007068 ORTHO05D008590 2.2e-41 174.1 488 33.0
PSO017G3869 Papaver somniferum HOM05D007068 ORTHO05D008590 6.5e-41 172.6 446 32.3
BcaB07g33743 Brassica carinata HOM05D007068 ORTHO05D008590 8.5e-41 172.2 460 33.7
Potri.012G047000 Populus trichocarpa HOM05D007068 ORTHO05D008590 2.5e-40 170.6 461 34.1
VMungo0251G0101 Vigna mungo HOM05D007068 ORTHO05D008590 4.2e-40 169.9 430 32.1
BcaC08g43059 Brassica carinata HOM05D007068 ORTHO05D008590 9.4e-40 168.7 469 30.9
BolC6t35436H Brassica oleracea HOM05D007068 ORTHO05D008590 9.4e-40 168.7 469 30.9
DCAR_014504 Daucus carota HOM05D007068 ORTHO05D008590 1.2e-39 168.3 447 33.8
arahy.Tifrunner.gnm1.ann1.ZH8P6D Arachis hypogaea HOM05D007068 ORTHO05D008590 1.6e-39 167.9 241 46.5
BraA06t23639Z Brassica rapa HOM05D007068 ORTHO05D008590 1.6e-39 167.9 469 32.4
unitig_8.g4506 Utricularia gibba HOM05D007068 ORTHO05D008590 1.6e-39 167.9 424 35.4
ClCG06G014310 Citrullus lanatus HOM05D007068 ORTHO05D008590 1.8e-38 164.5 472 33.5
FvH4_5g17330 Fragaria vesca HOM05D007068 ORTHO05D008590 1.8e-38 164.5 431 33.2
FAN18G2889 Fragaria x ananassa HOM05D007068 ORTHO05D008590 1.8e-38 164.5 431 33.2
Aa31LG10G5220 Aethionema arabicum HOM05D007068 ORTHO05D008590 6.7e-38 162.5 454 31.1
Glyma.08G054400 Glycine max HOM05D007068 ORTHO05D008590 1.2e-37 161.8 434 32.3
FAN13G0457 Fragaria x ananassa HOM05D007068 ORTHO05D008590 7.5e-37 159.1 426 33.3
Sabra12G0033000 Salix brachista HOM05D007068 ORTHO05D008590 7.5e-37 159.1 500 31.4
MD06G1227000 Malus domestica HOM05D007068 ORTHO05D008590 2.2e-36 157.5 259 42.9
EL10Ac4g08480 Beta vulgaris HOM05D007068 ORTHO05D008590 3.7e-36 156.8 221 46.2
RcHm_v2.0_Chr7g0178441 Rosa chinensis HOM05D007068 ORTHO05D008590 8.2e-36 155.6 435 32.9
Phvul.002G330100 Phaseolus vulgaris HOM05D007068 ORTHO05D008590 7.0e-35 152.5 453 29.6
Cpa.g.sc3.397 Carica papaya HOM05D007068 ORTHO05D008590 1.2e-34 151.8 440 30.5
Hma1.2p1_0669F.1_g200130 Hydrangea macrophylla HOM05D007068 ORTHO05D008590 2.7e-34 150.6 458 34.5
Ah.06g187490 Amaranthus hybridus HOM05D007068 ORTHO05D008590 1.5e-32 144.8 221 41.6
AUR62037972 Chenopodium quinoa HOM05D007068 ORTHO05D008590 1.9e-32 144.4 165 47.9
Sopen03g037660 Solanum pennellii HOM05D007068 ORTHO05D008590 4.2e-32 143.3 191 46.1
FAN04G2769 Fragaria x ananassa HOM05D007068 ORTHO05D008590 5.5e-32 142.9 427 31.1
Manes.14G171300 Manihot esculenta HOM05D007068 ORTHO05D008590 1.2e-31 141.7 466 31.8
MBI13_g47078_MAGBIO Magnolia biondii HOM05D007068 ORTHO05D008590 8.0e-31 139.0 267 36.7
CDE02G3810 Ceratophyllum demersum HOM05D007068 ORTHO05D008590 6.8e-30 136.0 254 36.6
Hund10357 Selenicereus undatus HOM05D007068 ORTHO05D008590 8.8e-30 135.6 232 40.5
VMungo0251G0567 Vigna mungo HOM05D007068 ORTHO05D008590 1.4e-27 128.3 256 35.2
Sc10g0009180 Simmondsia chinensis HOM05D007068 ORTHO05D008590 2.5e-24 117.5 250 34.8
ATR0618G302 Amborella trichopoda HOM05D007068 ORTHO05D008590 2.1e-23 114.4 360 30.0
Ciclev10008793m.g Citrus clementina HOM05D007068 ORTHO05D008590 3.0e-22 110.5 352 28.4
HPP92_002012 Vanilla planifolia HOM05D007068 ORTHO05D008590 5.2e-22 109.8 438 26.9
SEGI_36605 Sequoiadendron giganteum HOM05D007068 ORTHO05D008590 6.8e-22 109.4 124 46.0
SMO164G0186 Selaginella moellendorffii HOM05D007068 ORTHO05D008590 2.6e-21 107.5 124 45.2
HanXRQChr14g0431751 Helianthus annuus HOM05D007068 ORTHO05D008590 2.8e-20 104.0 79 64.6
Mapoly0060s0110 Marchantia polymorpha HOM05D007068 ORTHO05D008590 4.1e-19 100.1 135 43.7
Zm00001eb304630 Zea mays HOM05D007068 ORTHO05D008590 4.1e-19 100.1 260 33.5
SMO164G0105 Selaginella moellendorffii HOM05D020476 ORTHO05D008590 7.8e-18 95.9 136 39.7
vmacro17572 Vaccinium macrocarpon HOM05D007068 ORTHO05D008590 5.0e-17 93.2 82 54.9
Pp3c3_22100 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.3e-12 78.6 262 27.5
Pp3c3_22103 Physcomitrium patens HOM05D007068 ORTHO05D008590 1.3e-12 78.6 262 27.5
FAN08G2700 Fragaria x ananassa HOM05D007068 ORTHO05D008590 4.9e-12 76.6 115 37.4
arahy.Tifrunner.gnm1.ann1.USF1F6 Arachis hypogaea HOM05D007068 ORTHO05D008590 6.4e-12 76.3 56 60.7
VMungo1215G1321 Vigna mungo HOM05D007068 ORTHO05D008590 3.2e-11 73.9 69 53.6
AagrBONN_evm.TU.Sc2ySwM_362.2609 Anthoceros agrestis HOM05D007068 ORTHO05D008590 5.4e-11 73.2 96 38.5
CBR_g21755 Chara braunii HOM05D007068 ORTHO05D008590 8.6e-09 65.9 294 27.2
VMungo0251G2390 Vigna mungo HOM05D007068 ORTHO05D008590 2.3e-06 57.8 105 33.3


User provided reference genes

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