Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14316 Striga asiatica HOM05D006624 ORTHO05D008209 2.5e-217 758.4 375 100.0
Migut.N01377 Erythranthe guttata HOM05D006624 ORTHO05D008209 1.8e-130 469.9 369 62.1
MSTRG.12153 Avicennia marina HOM05D006624 ORTHO05D008209 3.0e-125 452.6 369 63.4
Dinv25186 Davidia involucrata HOM05D006624 ORTHO05D008209 3.4e-105 386.0 376 54.0
Actinidia10881 Actinidia chinensis HOM05D006624 ORTHO05D008209 9.3e-103 377.9 380 52.9
CSS0000809 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 1.1e-100 370.9 358 53.9
Cc08_g02070 Coffea canephora HOM05D006624 ORTHO05D008209 1.1e-100 370.9 380 51.3
SalBow6G4456 Salvia bowleyana HOM05D006624 ORTHO05D008209 1.5e-100 370.5 475 44.4
Nitab4.5_0004327g0020 Nicotiana tabacum HOM05D006624 ORTHO05D008209 4.3e-100 369.0 360 51.1
CSS0049781 Camellia sinensis var. sinensis HOM05D006624 ORTHO05D008209 5.6e-100 368.6 358 53.6
Rhsim07G0122500 Rhododendron simsii HOM05D006624 ORTHO05D008209 1.3e-99 367.5 345 54.5
Actinidia31470 Actinidia chinensis HOM05D006624 ORTHO05D008209 2.1e-99 366.7 375 50.4
HanXRQChr08g0227961 Helianthus annuus HOM05D006624 ORTHO05D008209 1.1e-98 364.4 375 51.5
Solyc08g077250.4 Solanum lycopersicum HOM05D006624 ORTHO05D008209 3.1e-98 362.8 361 50.1
PGSC0003DMG400024215 Solanum tuberosum HOM05D006624 ORTHO05D008209 1.2e-97 360.9 342 52.3
Sopen08g025830 Solanum pennellii HOM05D006624 ORTHO05D008209 3.4e-97 359.4 361 49.9
Nitab4.5_0002055g0180 Nicotiana tabacum HOM05D006624 ORTHO05D008209 5.8e-97 358.6 360 50.6
QL12p007008 Quercus lobata HOM05D006624 ORTHO05D008209 2.9e-96 356.3 377 48.5
Haze_08295 Corylus avellana HOM05D006624 ORTHO05D008209 1.1e-95 354.4 321 53.3
Sabra01G0115200 Salix brachista HOM05D006624 ORTHO05D008209 1.4e-95 354.0 382 48.4
CiPaw.11G087800 Carya illinoinensis HOM05D006624 ORTHO05D008209 5.4e-95 352.1 360 49.4
TAR629G2579 Trochodendron aralioides HOM05D006624 ORTHO05D008209 2.7e-94 349.7 383 49.6
Ciclev10031769m.g Citrus clementina HOM05D006624 ORTHO05D008209 6.0e-94 348.6 337 51.3
GSVIVG01013232001 Vitis vinifera HOM05D006624 ORTHO05D008209 3.9e-93 345.9 369 50.7
TWI15G0738 Tripterygium wilfordii HOM05D006624 ORTHO05D008209 1.1e-92 344.4 367 48.2
Duzib068G0530 Durio zibethinus HOM05D006624 ORTHO05D008209 7.3e-92 341.7 353 48.4
CAN.G799.14 Capsicum annuum HOM05D006624 ORTHO05D008209 2.1e-91 340.1 367 48.8
Sc01g0007740 Simmondsia chinensis HOM05D006624 ORTHO05D008209 4.8e-91 339.0 341 50.4
Gorai.003G180000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.4e-90 337.4 377 47.5
vmacro14109 Vaccinium macrocarpon HOM05D006624 ORTHO05D008209 1.8e-90 337.0 449 43.9
ECA233G2124 Erigeron canadensis HOM05D006624 ORTHO05D008209 9.0e-90 334.7 375 46.1
Potri.001G146500 Populus trichocarpa HOM05D006624 ORTHO05D008209 9.0e-90 334.7 372 47.8
COL.COLO4_17108 Corchorus olitorius HOM05D000087 ORTHO05D008209 6.4e-88 328.6 368 45.4
Aqoxy7G00644 Aquilegia oxysepala HOM05D006624 ORTHO05D008209 8.4e-88 328.2 341 50.1
Prupe.5G046100 Prunus persica HOM05D006624 ORTHO05D008209 1.1e-87 327.8 373 47.7
PGR042G3682 Punica granatum HOM05D006624 ORTHO05D008209 1.4e-87 327.4 378 46.6
QL12p007057 Quercus lobata HOM05D006624 ORTHO05D008209 5.4e-87 325.5 374 47.3
MD06G1040000 Malus domestica HOM05D006624 ORTHO05D008209 7.1e-87 325.1 343 49.9
Gohir.A03G002600 Gossypium hirsutum HOM05D006624 ORTHO05D008209 9.3e-87 324.7 382 46.1
Glyma.11G041200 Glycine max HOM05D006624 ORTHO05D008209 1.2e-86 324.3 352 47.7
Hund14427 Selenicereus undatus HOM05D006624 ORTHO05D008209 7.9e-86 321.6 349 47.9
Manes.17G019300 Manihot esculenta HOM05D006624 ORTHO05D008209 5.1e-85 318.9 365 47.1
Phvul.002G004700 Phaseolus vulgaris HOM05D006624 ORTHO05D008209 1.9e-84 317.0 381 45.4
Psat2g174640 Pisum sativum HOM05D006624 ORTHO05D008209 1.9e-84 317.0 355 46.8
Sed0020690 Sechium edule HOM05D006624 ORTHO05D008209 1.9e-84 317.0 369 44.2
DCAR_031785 Daucus carota HOM05D006624 ORTHO05D008209 3.3e-84 316.2 372 47.6
Glyma.01G200900 Glycine max HOM05D006624 ORTHO05D008209 3.3e-84 316.2 353 48.2
Ah.07g200030 Amaranthus hybridus HOM05D006624 ORTHO05D008209 7.4e-84 315.1 329 48.6
THA.LOC104827742 Tarenaya hassleriana HOM05D006624 ORTHO05D008209 7.4e-84 315.1 370 46.5
VMungo1215G2954 Vigna mungo HOM05D006624 ORTHO05D008209 7.4e-84 315.1 370 45.9
CsaV3_3G049520 Cucumis sativus L. HOM05D006624 ORTHO05D008209 2.1e-83 313.5 347 46.1
TPR.G21431 Trifolium pratense HOM05D006624 ORTHO05D008209 2.1e-83 313.5 365 46.6
Eucgr.E00310 Eucalyptus grandis HOM05D006624 ORTHO05D008209 2.8e-83 313.2 356 47.5
EL10Ac5g12192 Beta vulgaris HOM05D006624 ORTHO05D008209 4.8e-83 312.4 323 48.9
Thecc.03G233800 Theobroma cacao HOM05D006624 ORTHO05D008209 8.1e-83 311.6 368 45.9
ClCG09G012360 Citrullus lanatus HOM05D006624 ORTHO05D008209 1.1e-82 311.2 336 46.1
Aa31LG9G6360 Aethionema arabicum HOM05D006624 ORTHO05D008209 1.8e-82 310.5 375 44.8
Lj2g0021367 Lotus japonicus HOM05D006624 ORTHO05D008209 3.1e-82 309.7 364 46.2
RcHm_v2.0_Chr7g0208351 Rosa chinensis HOM05D006624 ORTHO05D008209 3.1e-82 309.7 352 47.2
AUR62018767 Chenopodium quinoa HOM05D006624 ORTHO05D008209 5.3e-82 308.9 317 48.9
Medtr5g014010 Medicago truncatula HOM05D006624 ORTHO05D008209 5.3e-82 308.9 368 44.6
Gohir.D03G169701 Gossypium hirsutum HOM05D006624 ORTHO05D008209 1.2e-81 307.8 288 51.0
Lalb_Chr16g0379211 Lupinus albus HOM05D006624 ORTHO05D008209 2.0e-81 307.0 332 46.7
Lsat_1_v5_gn_6_68241 Lactuca sativa HOM05D006624 ORTHO05D008209 2.6e-81 306.6 386 46.4
AUR62007233 Chenopodium quinoa HOM05D006624 ORTHO05D008209 1.3e-80 304.3 338 46.4
FvH4_5g21210 Fragaria vesca HOM05D006624 ORTHO05D008209 1.2e-78 297.7 352 45.7
BcaC06g31468 Brassica carinata HOM05D006624 ORTHO05D008209 2.1e-78 297.0 370 43.0
PSO339G2002 Papaver somniferum HOM05D006624 ORTHO05D008209 4.6e-78 295.8 378 44.4
C07p29750 Brassica napus HOM05D006624 ORTHO05D008209 3.0e-77 293.1 348 44.8
A06p45890 Brassica napus HOM05D006624 ORTHO05D008209 2.5e-76 290.0 363 43.0
BolC7t43526H Brassica oleracea HOM05D006624 ORTHO05D008209 2.5e-76 290.0 365 43.6
FAN08G0242 Fragaria x ananassa HOM05D006624 ORTHO05D008209 2.5e-76 290.0 364 44.0
arahy.Tifrunner.gnm1.ann1.A7V6P3 Arachis hypogaea HOM05D006624 ORTHO05D008209 4.3e-76 289.3 388 42.3
FAN04G0639 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.3e-76 289.3 353 44.5
BraA06t27456Z Brassica rapa HOM05D006624 ORTHO05D008209 5.7e-76 288.9 363 43.0
Atru.chr6.1770 Acer truncatum HOM05D006624 ORTHO05D008209 7.4e-76 288.5 386 42.7
PSO565G0001 Papaver somniferum HOM05D006624 ORTHO05D008209 1.3e-75 287.7 377 43.8
arahy.Tifrunner.gnm1.ann1.76B0S0 Arachis hypogaea HOM05D006624 ORTHO05D008209 2.8e-75 286.6 395 41.5
BcaC06g34373 Brassica carinata HOM05D006624 ORTHO05D008209 3.7e-75 286.2 360 42.5
AL8G11790 Arabidopsis lyrata HOM05D006624 ORTHO05D008209 1.4e-74 284.3 373 42.6
Carub.0008s0136 Capsella rubella HOM05D006624 ORTHO05D008209 1.3e-72 277.7 337 44.2
MELO3C003374.2 Cucumis melo HOM05D006624 ORTHO05D008209 1.7e-72 277.3 347 43.2
AT5G46560 Arabidopsis thaliana HOM05D006624 ORTHO05D008209 2.2e-72 276.9 366 42.1
ATR1101G009 Amborella trichopoda HOM05D006624 ORTHO05D008209 2.5e-71 273.5 330 42.1
Lj2A246G27 Lonicera japonica HOM05D006624 ORTHO05D008209 5.5e-71 272.3 291 48.1
FAN18G2886 Fragaria x ananassa HOM05D006624 ORTHO05D008209 4.8e-67 259.2 387 41.9
Zm00001eb000170 Zea mays HOM05D006624 ORTHO05D008209 1.2e-65 254.6 362 39.8
CDE04G3153 Ceratophyllum demersum HOM05D006624 ORTHO05D008209 1.6e-62 244.2 327 41.3
Cpa.g.sc6.412 Carica papaya HOM05D006624 ORTHO05D008209 1.8e-61 240.7 226 50.4
MBI04_g31972_MAGBIO Magnolia biondii HOM05D006624 ORTHO05D008209 1.5e-60 237.7 412 37.9
Mapoly0037s0054 Marchantia polymorpha HOM05D006624 ORTHO05D008209 5.3e-58 229.2 353 37.7
Peaxi162Scf00084g00925 Petunia axillaris HOM05D006624 ORTHO05D008209 9.1e-58 228.4 201 53.7
QL12p007029 Quercus lobata HOM05D006624 ORTHO05D008209 9.1e-58 228.4 262 43.5
Thhalv10000965m.g Eutrema salsugineum HOM05D006624 ORTHO05D008209 2.6e-57 226.9 308 40.3
Pp3c26_11390 Physcomitrium patens HOM05D006624 ORTHO05D008209 1.0e-56 224.9 322 39.4
SEGI_35168 Sequoiadendron giganteum HOM05D006624 ORTHO05D008209 1.8e-53 214.2 303 40.3
Ca_24634_v3 Cicer arietinum L. HOM05D006624 ORTHO05D008209 3.8e-48 196.4 184 52.7
Hma1.2p1_3049F.1_g332130 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 5.2e-45 186.0 302 40.4
FAN13G3188 Fragaria x ananassa HOM05D006624 ORTHO05D008209 7.4e-44 182.2 191 49.7
Gorai.001G276000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.8e-37 161.0 266 36.8
CBR_g18557 Chara braunii HOM05D006624 ORTHO05D008209 2.3e-37 160.6 250 34.4
CARHR175020 Cardamine hirsuta HOM05D006624 ORTHO05D008209 4.0e-37 159.8 235 39.6
Hma1.2p1_3049F.1_g332131 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 2.4e-34 150.6 129 61.2
SpUn0632_0010 Schrenkiella parvula HOM05D006624 ORTHO05D008209 2.2e-32 144.1 231 37.2
Gorai.004G193000 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.1e-31 141.7 227 36.6
Hma1.2p1_0414F.1_g147760 Hydrangea macrophylla HOM05D006624 ORTHO05D008209 6.3e-27 125.9 144 46.5
AagrBONN_evm.TU.Sc2ySwM_362.2673 Anthoceros agrestis HOM05D006624 ORTHO05D008209 4.5e-25 119.8 203 31.0
Gorai.013G102100 Gossypium raimondii HOM05D006624 ORTHO05D008209 1.7e-24 117.9 136 41.2
Duzib084G0908 Durio zibethinus HOM05D006624 ORTHO05D008209 9.5e-23 112.1 119 42.0
Peaxi162Scf00084g00918 Petunia axillaris HOM05D006624 ORTHO05D008209 1.4e-18 98.2 117 45.3
arahy.Tifrunner.gnm1.ann1.PE2WYP Arachis hypogaea HOM05D006624 ORTHO05D008209 3.5e-17 93.6 184 34.8
Gorai.004G213700 Gossypium raimondii HOM05D006624 ORTHO05D008209 9.8e-12 75.5 229 27.9
Gorai.001G079600 Gossypium raimondii HOM05D006624 ORTHO05D008209 2.4e-10 70.9 80 37.5
Gohir.D11G288800 Gossypium hirsutum HOM05D000724 ORTHO05D011687 4.1e-10 70.1 92 35.9
Gohir.D08G202450 Gossypium hirsutum HOM05D006624 ORTHO05D008209 4.6e-09 66.6 63 44.4
Gohir.D07G137300 Gossypium hirsutum HOM05D006624 ORTHO05D008209 3.0e-08 63.9 61 42.6
Os03g0100050 Oryza sativa ssp. japonica HOM05D006624 ORTHO05D008209 3.0e-08 63.9 118 38.1
CBR_g30426 Chara braunii HOM05D006624 ORTHO05D008209 9.5e-07 58.9 56 48.2


User provided reference genes

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