Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold36G14267 Striga asiatica HOM05D002744 ORTHO05D008989 9.7e-110 400.2 210 100.0
MSTRG.12212 Avicennia marina HOM05D002744 ORTHO05D008989 3.1e-71 272.3 221 68.8
Migut.A01076 Erythranthe guttata HOM05D002744 ORTHO05D008989 2.6e-70 269.2 228 66.2
SalBow3G4547 Salvia bowleyana HOM05D002744 ORTHO05D008989 5.8e-62 241.5 222 61.7
GSVIVG01032723001 Vitis vinifera HOM05D002744 ORTHO05D008989 2.9e-61 239.2 181 71.8
Dinv21809 Davidia involucrata HOM05D002744 ORTHO05D008989 4.6e-59 231.9 182 70.3
Thecc.10G007100 Theobroma cacao HOM05D002744 ORTHO05D008989 1.7e-58 229.9 181 71.3
Peaxi162Scf00284g00123 Petunia axillaris HOM05D002744 ORTHO05D008989 3.0e-58 229.2 179 67.6
Gohir.D04G071200 Gossypium hirsutum HOM05D002744 ORTHO05D008989 7.3e-57 224.6 181 69.1
QL08p064284 Quercus lobata HOM05D002744 ORTHO05D008989 9.6e-57 224.2 181 70.7
Potri.008G075600 Populus trichocarpa HOM05D002744 ORTHO05D008989 1.3e-56 223.8 192 66.1
Actinidia00986 Actinidia chinensis HOM05D002744 ORTHO05D008989 1.6e-56 223.4 181 69.6
CiPaw.02G197300 Carya illinoinensis HOM05D002744 ORTHO05D008989 2.1e-56 223.0 182 68.1
arahy.Tifrunner.gnm1.ann1.HIE7A8 Arachis hypogaea HOM05D002744 ORTHO05D008989 2.8e-56 222.6 182 66.5
CsaV3_5G010720 Cucumis sativus L. HOM05D002744 ORTHO05D008989 3.6e-56 222.2 188 65.4
Gohir.A05G332500 Gossypium hirsutum HOM05D002744 ORTHO05D008989 4.8e-56 221.9 182 68.1
HanXRQChr17g0560791 Helianthus annuus HOM05D002744 ORTHO05D008989 4.8e-56 221.9 180 66.7
Rhsim09G0182800 Rhododendron simsii HOM05D002744 ORTHO05D008989 4.8e-56 221.9 177 68.4
Nitab4.5_0000928g0050 Nicotiana tabacum HOM05D002744 ORTHO05D008989 1.1e-55 220.7 181 65.7
Duzib114G0765 Durio zibethinus HOM05D002744 ORTHO05D008989 1.4e-55 220.3 182 67.6
MD07G1229300 Malus domestica HOM05D002744 ORTHO05D008989 1.8e-55 219.9 175 69.7
Sopen02g021690 Solanum pennellii HOM05D002744 ORTHO05D008989 1.8e-55 219.9 181 64.6
Ciclev10032836m.g Citrus clementina HOM05D002744 ORTHO05D008989 2.4e-55 219.5 181 66.9
Haze_17321 Corylus avellana HOM05D002744 ORTHO05D008989 4.0e-55 218.8 181 69.6
COL.COLO4_25825 Corchorus olitorius HOM05D002744 ORTHO05D006546 9.0e-55 217.6 190 63.7
RcHm_v2.0_Chr1g0371481 Rosa chinensis HOM05D002744 ORTHO05D008989 9.0e-55 217.6 180 67.2
Sabra08G0056200 Salix brachista HOM05D002744 ORTHO05D008989 2.0e-54 216.5 184 65.2
Gorai.012G080100 Gossypium raimondii HOM05D002744 ORTHO05D008989 2.6e-54 216.1 192 64.1
arahy.Tifrunner.gnm1.ann1.N80L0Z Arachis hypogaea HOM05D002744 ORTHO05D008989 4.4e-54 215.3 177 65.5
Hma1.2p1_1240F.1_g269640 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 4.4e-54 215.3 159 71.1
PGR142G3983 Punica granatum HOM05D002744 ORTHO05D008989 5.8e-54 214.9 185 63.8
Sed0024728 Sechium edule HOM05D002744 ORTHO05D008989 5.8e-54 214.9 182 64.8
TWI38G2197 Tripterygium wilfordii HOM05D002744 ORTHO05D008989 7.6e-54 214.5 181 66.3
FAN06G0491 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.3e-53 213.8 203 57.6
Glyma.18G022300 Glycine max HOM05D002744 ORTHO05D008989 1.3e-53 213.8 182 65.9
arahy.Tifrunner.gnm1.ann1.B5C26Y Arachis hypogaea HOM05D002744 ORTHO05D008989 2.2e-53 213.0 177 65.0
Cc02_g05720 Coffea canephora HOM05D002744 ORTHO05D008989 3.8e-53 212.2 177 66.7
Eucgr.G03110 Eucalyptus grandis HOM05D002744 ORTHO05D008989 4.9e-53 211.8 181 64.6
MD01G1161400 Malus domestica HOM05D002744 ORTHO05D008989 4.9e-53 211.8 177 67.8
Hund13513 Selenicereus undatus HOM05D002744 ORTHO05D008989 4.9e-53 211.8 184 62.0
FvH4_7g25501 Fragaria vesca HOM05D002744 ORTHO05D008989 6.4e-53 211.5 177 62.1
Glyma.11G234700 Glycine max HOM05D002744 ORTHO05D008989 6.4e-53 211.5 178 66.3
CANSAT56G2966 Cannabis sativa HOM05D002744 ORTHO05D008989 8.4e-53 211.1 181 63.5
Cpa.g.sc19.99 Carica papaya HOM05D002744 ORTHO05D008989 1.1e-52 210.7 179 65.9
FAN03G1008 Fragaria x ananassa HOM05D002744 ORTHO05D006546 1.9e-52 209.9 203 56.7
Nitab4.5_0000263g0100 Nicotiana tabacum HOM05D002744 ORTHO05D008989 2.4e-52 209.5 162 68.5
Lalb_Chr08g0231351 Lupinus albus HOM05D002744 ORTHO05D008989 4.2e-52 208.8 178 63.5
vmacro09984 Vaccinium macrocarpon HOM05D002744 ORTHO05D008989 1.2e-51 207.2 218 55.0
Manes.10G008400 Manihot esculenta HOM05D002744 ORTHO05D008989 1.6e-51 206.8 176 64.8
AUR62022976 Chenopodium quinoa HOM05D002744 ORTHO05D008989 2.1e-51 206.5 177 62.7
Phvul.001G248100 Phaseolus vulgaris HOM05D002744 ORTHO05D008989 4.6e-51 205.3 179 62.6
FAN10G0428 Fragaria x ananassa HOM05D002744 ORTHO05D006546 7.8e-51 204.5 175 61.7
CSS0017108 Camellia sinensis var. sinensis HOM05D002744 ORTHO05D006546 1.3e-50 203.8 160 68.1
Nn2g11068 Nelumbo nucifera HOM05D002744 ORTHO05D008989 2.3e-50 203.0 182 63.2
EL10Ac2g04293 Beta vulgaris HOM05D002744 ORTHO05D008989 3.9e-50 202.2 171 63.7
Medtr3g072120 Medicago truncatula HOM05D002744 ORTHO05D008989 3.9e-50 202.2 182 61.5
Ca_15179_v3 Cicer arietinum L. HOM05D002744 ORTHO05D008989 5.1e-50 201.8 182 62.1
TPR.G28641 Trifolium pratense HOM05D002744 ORTHO05D008989 8.7e-50 201.1 179 62.0
DCAR_011891 Daucus carota HOM05D002744 ORTHO05D008989 2.5e-49 199.5 156 69.2
Lj6g0011522 Lotus japonicus HOM05D002744 ORTHO05D008989 2.5e-49 199.5 180 61.1
ECA233G4001 Erigeron canadensis HOM05D002744 ORTHO05D008989 5.6e-49 198.4 184 62.0
VMungo1383G3724 Vigna mungo HOM05D002744 ORTHO05D008989 3.6e-48 195.7 217 52.1
Lju41C22T0 Lonicera japonica HOM05D002744 ORTHO05D008989 4.8e-48 195.3 159 67.9
Sp5g06290 Schrenkiella parvula HOM05D002744 ORTHO05D008989 4.8e-48 195.3 179 59.2
Atru.BG.256.p Acer truncatum HOM05D002744 ORTHO05D008989 6.2e-48 194.9 153 69.3
Lj8C58T1 Lonicera japonica HOM05D002744 ORTHO05D008989 6.2e-48 194.9 159 67.9
Thhalv10006252m.g Eutrema salsugineum HOM05D002744 ORTHO05D008989 1.1e-47 194.1 179 58.1
Lsat_1_v5_gn_8_13401 Lactuca sativa HOM05D002744 ORTHO05D008989 3.1e-47 192.6 155 67.1
Carub.0005s2299 Capsella rubella HOM05D002744 ORTHO05D008989 5.3e-47 191.8 179 57.5
AL5G37530 Arabidopsis lyrata HOM05D002744 ORTHO05D008989 6.9e-47 191.4 180 57.8
unitig_32.g11706 Utricularia gibba HOM05D002744 ORTHO05D008989 9.0e-47 191.0 188 58.5
unitig_33.g30211 Utricularia gibba HOM05D002744 ORTHO05D008989 9.0e-47 191.0 188 58.5
BcaB08g34630 Brassica carinata HOM05D002744 ORTHO05D008989 1.2e-46 190.7 165 59.4
ClCG07G004800 Citrullus lanatus HOM05D002744 ORTHO05D008989 1.2e-46 190.7 177 61.0
AUR62012334 Chenopodium quinoa HOM05D002744 ORTHO05D008989 1.5e-46 190.3 181 58.6
PSO017G6389 Papaver somniferum HOM05D002744 ORTHO05D008989 2.6e-46 189.5 187 56.1
CARHR166360 Cardamine hirsuta HOM05D002744 ORTHO05D008989 7.6e-46 188.0 171 59.6
THA.LOC104824346 Tarenaya hassleriana HOM05D002744 ORTHO05D008989 1.3e-45 187.2 172 58.7
PSO170G0776 Papaver somniferum HOM05D002744 ORTHO05D008989 3.8e-45 185.7 187 55.1
FAN01G1994 Fragaria x ananassa HOM05D002744 ORTHO05D006546 4.9e-45 185.3 225 48.4
Prupe.2G259500 Prunus persica HOM05D002744 ORTHO05D008989 4.9e-45 185.3 123 78.0
AT3G56210 Arabidopsis thaliana HOM05D002744 ORTHO05D008989 8.4e-45 184.5 181 56.4
A09p49190 Brassica napus HOM05D002744 ORTHO05D008989 5.4e-44 181.8 172 57.0
Os03g0665800 Oryza sativa ssp. japonica HOM05D002744 ORTHO05D008989 2.1e-43 179.9 154 59.1
BraA09t40372Z Brassica rapa HOM05D002744 ORTHO05D008989 2.7e-43 179.5 180 55.0
Oeu026180.1 Olea europaea HOM05D002744 ORTHO05D008989 3.5e-43 179.1 137 70.1
PGSC0003DMG400010239 Solanum tuberosum HOM05D002744 ORTHO05D008989 3.0e-42 176.0 124 74.2
HPP92_013966 Vanilla planifolia HOM05D002744 ORTHO05D008989 1.1e-41 174.1 210 48.1
Solyc02g076790.4 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.5e-41 172.9 124 71.8
ATR0681G046 Amborella trichopoda HOM05D000826 ORTHO05D008989 4.3e-41 172.2 162 59.3
Hma1.2p1_1240F.1_g269630 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 7.4e-41 171.4 132 68.9
TAR623G0678 Trochodendron aralioides HOM05D002744 ORTHO05D008989 1.0e-37 161.0 122 69.7
Gohir.A10G240750 Gossypium hirsutum HOM05D002744 ORTHO05D008989 1.9e-36 156.8 124 65.3
TAR369G0133 Trochodendron aralioides HOM05D000826 ORTHO05D001831 1.9e-36 156.8 175 53.7
Lj1A963T49 Lonicera japonica HOM05D002744 ORTHO05D008989 1.2e-35 154.1 111 74.8
SEGI_09795 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 1.6e-35 153.7 179 50.8
Aa31LG10G11120 Aethionema arabicum HOM05D002744 ORTHO05D008989 3.5e-35 152.5 123 62.6
EL10Ac2g04295 Beta vulgaris HOM05D002744 ORTHO05D008989 6.0e-35 151.8 135 61.5
BcaB01g00016 Brassica carinata HOM05D002744 ORTHO05D008989 7.9e-35 151.4 143 55.9
MELO3C020107.2 Cucumis melo HOM05D002744 ORTHO05D008989 3.9e-34 149.1 188 49.5
BcaC07g39936 Brassica carinata HOM05D002744 ORTHO05D008989 1.9e-33 146.7 123 64.2
C08p31530 Brassica napus HOM05D002744 ORTHO05D008989 1.9e-33 146.7 129 62.0
Zm00001eb065520 Zea mays HOM05D002744 ORTHO05D008989 1.6e-32 143.7 112 62.5
CDE02G4284 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 2.1e-32 143.3 122 64.8
BcaB01g00017 Brassica carinata HOM05D002744 ORTHO05D008989 2.4e-31 139.8 168 48.8
BolC8t50775H Brassica oleracea HOM05D002744 ORTHO05D008989 8.4e-29 131.3 164 46.3
SEGI_38813 Sequoiadendron giganteum HOM05D002744 ORTHO05D008989 2.2e-24 116.7 115 53.9
Mapoly0001s0439 Marchantia polymorpha HOM05D002744 ORTHO05D008989 1.7e-21 107.1 161 40.4
Hma1.2p1_0322F.1_g124790 Hydrangea macrophylla HOM05D002744 ORTHO05D008989 2.2e-21 106.7 153 43.8
Psat5g130160 Pisum sativum HOM05D002744 ORTHO05D008989 8.5e-21 104.8 92 66.3
Sc10g0002800 Simmondsia chinensis HOM05D002744 ORTHO05D008989 4.8e-16 89.0 113 52.2
CDE01G0559 Ceratophyllum demersum HOM05D002744 ORTHO05D008989 1.1e-15 87.8 143 40.6
Pp3c8_1670 Physcomitrium patens HOM05D002744 ORTHO05D008989 3.2e-12 76.3 132 37.1
SMO147G0318 Selaginella moellendorffii HOM05D002744 ORTHO05D008989 2.7e-11 73.2 132 36.4
CAN.G118.19 Capsicum annuum HOM05D002744 ORTHO05D008989 2.0e-09 67.0 50 64.0
Solyc06g050837.1 Solanum lycopersicum HOM05D002744 ORTHO05D008989 2.6e-06 56.6 54 50.0
Psat5g125520 Pisum sativum HOM05D002744 ORTHO05D008989 3.5e-06 56.2 47 66.0


User provided reference genes

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