Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 5.2e-223 777.3 372 100.0
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 9.3e-164 580.5 365 77.8
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 1.9e-161 572.8 367 77.1
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 2.8e-99 366.3 362 55.0
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 3.7e-43 179.9 411 33.6
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 2.0e-41 174.1 377 35.5
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 4.5e-41 172.9 318 37.4
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 4.5e-41 172.9 370 34.6
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-40 169.9 319 36.4
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 2.1e-38 164.1 360 36.1
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 3.6e-38 163.3 322 35.7
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 1.9e-36 157.5 349 36.1
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 2.3e-29 134.0 392 30.6
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 5.7e-28 129.4 335 31.0
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 7.4e-28 129.0 273 33.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 2.2e-27 127.5 258 36.4
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-26 125.2 354 31.9
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 5.3e-26 122.9 252 35.7
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 2.5e-23 114.0 268 32.8
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 4.2e-23 113.2 252 34.1
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 4.7e-22 109.8 262 31.7
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 3.9e-21 106.7 280 31.1
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 3.3e-20 103.6 233 30.9
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 7.4e-20 102.4 228 32.5
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 7.4e-20 102.4 224 33.0
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 3.7e-19 100.1 261 30.7
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 1.1e-18 98.6 253 32.0
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 1.1e-18 98.6 260 31.5
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-18 98.2 333 28.2
SGA_v2.0_scaffold404G51019 Striga asiatica HOM05D011185 ORTHO05D010595 2.6e-17 94.0 152 44.7
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 5.9e-17 92.8 189 34.4
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 1.9e-15 87.8 185 34.6
SGA_v2.0_scaffold223G42883 Striga asiatica HOM05D000002 ORTHO05D000001 7.2e-15 85.9 278 26.3
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 7.2e-15 85.9 206 32.0
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.2e-15 85.9 234 32.1
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 6.1e-14 82.8 164 34.8
Sopen04g026360 Solanum pennellii HOM05D000007 ORTHO05D000039 1.2e-12 78.6 248 28.6
Cfa007606 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.5e-12 78.2 228 27.6
PGSC0003DMG400024833 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.6e-12 77.4 237 30.0
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 3.3e-12 77.0 285 26.7
PGSC0003DMG400024834 Solanum tuberosum HOM05D000007 ORTHO05D000039 9.7e-12 75.5 237 30.0
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 2.2e-11 74.3 353 24.1
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.2e-11 74.3 235 26.8
Solyc04g063440.3 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.8e-11 73.9 247 27.5
Thecc.10G169100 Theobroma cacao HOM05D000007 ORTHO05D000039 4.8e-11 73.2 226 27.9
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.1e-10 72.0 226 28.8
Sopen04g026370 Solanum pennellii HOM05D000007 ORTHO05D000039 1.1e-10 72.0 230 27.4
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.1e-10 70.5 192 28.1
Sopen04g026320 Solanum pennellii HOM05D000007 ORTHO05D000039 4.1e-10 70.1 252 27.4
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 5.3e-10 69.7 131 33.6
Migut.M00112 Erythranthe guttata HOM05D000007 ORTHO05D000039 7.0e-10 69.3 197 27.4
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 9.1e-10 68.9 284 25.4
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.2e-09 68.6 230 26.5
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 1.6e-09 68.2 197 26.9
Gohir.D10G240616 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-09 68.2 240 27.5
Gohir.D10G241300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-09 68.2 240 27.5
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.0e-09 67.8 232 26.7
Nn2g13281 Nelumbo nucifera HOM05D000007 ORTHO05D000017 2.0e-09 67.8 121 33.1
SGA_v2.0_scaffold319G48536 Striga asiatica HOM05D029507 ORTHO05D010595 2.0e-09 67.8 93 45.2
CiPaw.03G025900 Carya illinoinensis HOM05D000007 ORTHO05D000039 2.7e-09 67.4 192 28.1
Lj5C168T5 Lonicera japonica HOM05D015266 ORTHO05D048446 3.5e-09 67.0 98 35.7
Aqoxy3G01256 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 4.5e-09 66.6 296 23.3
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 5.9e-09 66.2 106 34.9
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 7.7e-09 65.9 229 26.6
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-08 65.5 202 29.2
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-08 65.5 202 29.2
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.0e-08 65.5 202 29.2
QL04p029261 Quercus lobata HOM05D000007 ORTHO05D000039 1.0e-08 65.5 255 25.1
QL04p068200 Quercus lobata HOM05D000007 ORTHO05D000017 1.0e-08 65.5 264 25.0
Rhsim12G0135700 Rhododendron simsii HOM05D000298 ORTHO05D000039 1.0e-08 65.5 212 26.9
SGA_v2.0_scaffold208G41986 Striga asiatica HOM05D029507 ORTHO05D000735 1.0e-08 65.5 91 40.7
PGSC0003DMG400024825 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.3e-08 65.1 232 26.3
EL10Ac9g22770 Beta vulgaris HOM05D000007 ORTHO05D000039 1.7e-08 64.7 309 23.9
AUR62031045 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.7e-08 64.7 296 25.7
FvH4_3g39980 Fragaria vesca HOM05D000007 ORTHO05D005026 1.7e-08 64.7 234 26.1
FAN11G0170 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.7e-08 64.7 238 26.5
FAN16G2291 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.7e-08 64.7 234 26.1
FAN25G3524 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.7e-08 64.7 236 25.8
PSO017G6118 Papaver somniferum HOM05D000007 ORTHO05D000017 1.7e-08 64.7 200 29.5
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-08 64.3 213 26.8
Manes.07G011100 Manihot esculenta HOM05D000007 ORTHO05D000039 2.2e-08 64.3 285 24.6
QL04p068155 Quercus lobata HOM05D000007 ORTHO05D000017 2.2e-08 64.3 221 26.2
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.9e-08 63.9 226 27.0
Sed0014390 Sechium edule HOM05D007726 ORTHO05D008819 2.9e-08 63.9 228 25.4
SGA_v2.0_scaffold319G48540 Striga asiatica HOM05D029507 ORTHO05D010595 2.9e-08 63.9 96 41.7
Cfa000500 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.8e-08 63.5 210 28.1
Prupe.6G318300 Prunus persica HOM05D000007 ORTHO05D000039 3.8e-08 63.5 228 25.9
RcHm_v2.0_Chr5g0060691 Rosa chinensis HOM05D000007 ORTHO05D000017 3.8e-08 63.5 163 28.8
Sopen04g026420 Solanum pennellii HOM05D000007 ORTHO05D000039 3.8e-08 63.5 236 27.5
Oeu030915.1 Olea europaea HOM05D000007 ORTHO05D000039 5.0e-08 63.2 269 27.9
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 6.5e-08 62.8 200 24.0
Manes.18G107800 Manihot esculenta HOM05D007726 ORTHO05D008819 6.5e-08 62.8 228 25.4
QL01p045544 Quercus lobata HOM05D000007 ORTHO05D000521 6.5e-08 62.8 102 35.3
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.1e-07 62.0 95 33.7
CiPaw.07G037900 Carya illinoinensis HOM05D000007 ORTHO05D000017 1.1e-07 62.0 259 26.3
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 1.1e-07 62.0 179 28.5
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 1.1e-07 62.0 186 28.0
Rhsim07G0005800 Rhododendron simsii HOM05D000007 ORTHO05D000039 1.1e-07 62.0 260 22.7
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 1.1e-07 62.0 201 24.4
PSO717G0120 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 61.6 103 34.0
Potri.001G129400 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.5e-07 61.6 170 28.2
RcHm_v2.0_Chr5g0060711 Rosa chinensis HOM05D000007 ORTHO05D000017 2.5e-07 60.8 151 29.1
CANSAT54G1614 Cannabis sativa HOM05D000007 ORTHO05D000039 3.2e-07 60.5 213 24.9
Gohir.A10G227401 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.2e-07 60.5 164 28.0
Lj1A1095T30 Lonicera japonica HOM05D000007 ORTHO05D000039 3.2e-07 60.5 242 26.9
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-07 60.5 173 27.2
CANSAT11G2407 Cannabis sativa HOM05D000007 ORTHO05D000039 4.2e-07 60.1 212 26.4
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.2e-07 60.1 200 23.5
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 4.2e-07 60.1 200 23.0
CSS0045215 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 5.5e-07 59.7 174 25.9
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 5.5e-07 59.7 94 33.0
Sopen00g007910 Solanum pennellii HOM05D000007 ORTHO05D000039 5.5e-07 59.7 120 33.3
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.5e-07 59.7 173 27.2
Aqoxy3G01080 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 7.2e-07 59.3 116 34.5
Nitab4.5_0006722g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.2e-07 59.3 227 26.9
PGSC0003DMG400024829 Solanum tuberosum HOM05D000007 ORTHO05D000039 7.2e-07 59.3 234 25.2
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 9.4e-07 58.9 207 25.6
AUR62038902 Chenopodium quinoa HOM05D000007 ORTHO05D000039 9.4e-07 58.9 201 25.4
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 9.4e-07 58.9 202 23.8
MD09G1130400 Malus domestica HOM05D000007 ORTHO05D000039 9.4e-07 58.9 256 23.0
PSO675G8287 Papaver somniferum HOM05D000007 ORTHO05D000017 9.4e-07 58.9 223 28.7
QL04p045652 Quercus lobata HOM05D000007 ORTHO05D000039 9.4e-07 58.9 140 30.0
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.2e-06 58.5 208 28.8
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 1.2e-06 58.5 190 29.5
SalBow1G7064 Salvia bowleyana HOM05D000007 ORTHO05D000017 1.2e-06 58.5 146 26.7
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.6e-06 58.2 231 25.1
FAN25G0801 Fragaria x ananassa HOM05D003981 ORTHO05D003666 1.6e-06 58.2 144 28.5
PSO339G5766 Papaver somniferum HOM05D000007 ORTHO05D000017 1.6e-06 58.2 160 28.8
RcHm_v2.0_Chr5g0072021 Rosa chinensis HOM05D000007 ORTHO05D005026 2.1e-06 57.8 246 27.6
Eucgr.H02747 Eucalyptus grandis HOM05D000007 ORTHO05D000017 2.7e-06 57.4 193 24.9
PSO478G1750 Papaver somniferum HOM05D000007 ORTHO05D000017 2.7e-06 57.4 177 28.2
Haze_15767 Corylus avellana HOM05D000007 ORTHO05D000039 3.6e-06 57.0 171 25.7
QL04p029140 Quercus lobata HOM05D000007 ORTHO05D000039 3.6e-06 57.0 169 27.2
Glyma.20G073200 Glycine max HOM05D000007 ORTHO05D000017 4.7e-06 56.6 169 23.1
PSO478G4399 Papaver somniferum HOM05D000007 ORTHO05D000676 4.7e-06 56.6 229 24.9
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 4.7e-06 56.6 204 27.0
Aqoxy3G01081 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 6.1e-06 56.2 104 32.7
Cc05_g03750 Coffea canephora HOM05D000007 ORTHO05D000039 6.1e-06 56.2 176 28.4
Medtr2g025960 Medicago truncatula HOM05D000007 ORTHO05D000017 6.1e-06 56.2 172 29.7
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 56.2 203 26.1
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 56.2 203 26.1
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 56.2 203 26.1
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 6.1e-06 56.2 203 26.1
RcHm_v2.0_Chr5g0060681 Rosa chinensis HOM05D000007 ORTHO05D000017 6.1e-06 56.2 108 29.6
Actinidia35052 Actinidia chinensis HOM05D000007 ORTHO05D000676 8.0e-06 55.8 131 27.5
COL.COLO4_08318 Corchorus olitorius HOM05D000007 ORTHO05D034860 8.0e-06 55.8 201 23.4
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 8.0e-06 55.8 96 34.4
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 8.0e-06 55.8 153 28.1


User provided reference genes

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