Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold366G50039 Striga asiatica HOM05D009041 ORTHO05D010054 2.8e-165 585.1 277 100.0
SGA_v2.0_scaffold160G37740 Striga asiatica HOM05D009041 ORTHO05D010054 7.4e-41 171.8 118 67.8
SGA_v2.0_scaffold21G09437 Striga asiatica HOM05D009041 ORTHO05D010054 6.5e-37 158.7 104 69.2
SGA_v2.0_scaffold347G49563 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-35 154.5 112 64.3
SGA_v2.0_scaffold668G53413 Striga asiatica HOM05D009041 ORTHO05D010054 3.6e-35 152.9 110 62.7
SGA_v2.0_scaffold115G32155 Striga asiatica HOM05D009041 ORTHO05D010054 4.0e-34 149.4 119 63.0
SGA_v2.0_scaffold548G52852 Striga asiatica HOM05D009041 ORTHO05D010054 4.0e-34 149.4 119 63.0
SGA_v2.0_scaffold47G17570 Striga asiatica HOM05D009041 ORTHO05D010054 2.0e-33 147.1 120 61.7
SGA_v2.0_scaffold211G42151 Striga asiatica HOM05D009041 ORTHO05D010054 2.2e-32 143.7 116 55.2
SGA_v2.0_scaffold13G06721 Striga asiatica HOM05D009041 ORTHO05D010054 2.4e-31 140.2 103 62.1
SGA_v2.0_scaffold26G11342 Striga asiatica HOM05D009041 ORTHO05D010054 2.4e-31 140.2 103 62.1
SGA_v2.0_scaffold6G03390 Striga asiatica HOM05D009041 ORTHO05D010054 4.1e-31 139.4 118 59.3
SGA_v2.0_scaffold63G21825 Striga asiatica HOM05D009041 ORTHO05D010054 4.5e-30 136.0 94 61.7
SGA_v2.0_scaffold180G39666 Striga asiatica HOM05D000045 ORTHO05D010054 1.7e-29 134.0 105 62.9
SGA_v2.0_scaffold25G10890 Striga asiatica HOM05D009041 ORTHO05D010054 2.9e-29 133.3 116 57.8
SGA_v2.0_scaffold130G34321 Striga asiatica HOM05D009041 ORTHO05D010054 8.5e-29 131.7 105 54.3
SGA_v2.0_scaffold21G09336 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-28 131.3 105 61.0
SGA_v2.0_scaffold5G02531 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-28 131.0 104 59.6
SGA_v2.0_scaffold11G05825 Striga asiatica HOM05D009041 ORTHO05D010054 3.2e-28 129.8 104 58.7
SGA_v2.0_scaffold79G25579 Striga asiatica HOM05D009041 ORTHO05D010054 2.7e-27 126.7 104 56.7
SGA_v2.0_scaffold270G46313 Striga asiatica HOM05D009041 ORTHO05D010054 1.5e-25 120.9 92 59.8
SGA_v2.0_scaffold142G35653 Striga asiatica HOM05D009041 ORTHO05D010054 4.1e-23 112.8 93 54.8
SGA_v2.0_scaffold577G53016 Striga asiatica HOM05D009041 ORTHO05D010054 1.6e-22 110.9 81 64.2
SGA_v2.0_scaffold27G11549 Striga asiatica HOM05D009041 ORTHO05D010054 3.5e-22 109.8 102 56.9
SGA_v2.0_scaffold46G17333 Striga asiatica HOM05D009041 ORTHO05D010054 2.9e-21 106.7 70 68.6
SGA_v2.0_scaffold18G08321 Striga asiatica HOM05D009041 ORTHO05D010054 8.3e-16 88.6 67 61.2
SGA_v2.0_scaffold86G26862 Striga asiatica HOM05D000045 ORTHO05D010054 1.4e-15 87.8 99 44.4
SGA_v2.0_scaffold147G36271 Striga asiatica HOM05D009041 ORTHO05D010054 3.1e-15 86.7 62 58.1
SGA_v2.0_scaffold249G44954 Striga asiatica HOM05D009041 ORTHO05D010054 5.4e-15 85.9 80 48.8
TPR.G30322 Trifolium pratense HOM05D009041 ORTHO05D010054 5.0e-13 79.3 70 50.0
TPR.G33858 Trifolium pratense HOM05D001572 ORTHO05D000733 1.5e-12 77.8 70 50.0
EL10Ac2g02717 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-12 77.0 101 39.6
EL10Ac3g06581 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-12 77.0 101 39.6
EL10Ac5g11586 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-12 77.0 102 39.2
EL10Ac6g13792 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-12 77.0 101 39.6
EL10As3g23329 Beta vulgaris HOM05D000045 ORTHO05D000067 2.5e-12 77.0 101 39.6
EL10Ac6g14806 Beta vulgaris HOM05D000045 ORTHO05D000067 3.3e-12 76.6 101 39.6
SGA_v2.0_scaffold278G46733 Striga asiatica HOM05D009041 ORTHO05D010054 5.6e-12 75.9 94 45.7
MBI14_g08022_MAGBIO Magnolia biondii HOM05D000045 ORTHO05D000611 7.3e-12 75.5 227 28.2
TAR633G0535 Trochodendron aralioides HOM05D000045 ORTHO05D000067 9.5e-12 75.1 218 27.5
SGA_v2.0_scaffold309G48184 Striga asiatica HOM05D014716 ORTHO05D010054 2.1e-11 73.9 99 34.3
EL10Ac5g12499 Beta vulgaris HOM05D000045 ORTHO05D000067 3.6e-11 73.2 101 38.6
EL10Ac8g19696 Beta vulgaris HOM05D000045 ORTHO05D000067 3.6e-11 73.2 101 38.6
CANSAT78G2279 Cannabis sativa HOM05D000045 ORTHO05D000067 6.1e-11 72.4 234 26.9
Lj4g0022113 Lotus japonicus HOM05D000045 ORTHO05D000067 1.0e-10 71.6 223 26.9
Lj6g0002917 Lotus japonicus HOM05D000045 ORTHO05D000067 1.0e-10 71.6 223 26.9
Nn6g35234 Nelumbo nucifera HOM05D000045 ORTHO05D000067 1.4e-10 71.2 230 27.8
SGA_v2.0_scaffold108G30934 Striga asiatica HOM05D000045 ORTHO05D010054 1.8e-10 70.9 99 35.4
Lj5g0021168 Lotus japonicus HOM05D000045 ORTHO05D000695 4.0e-10 69.7 63 46.0
Hund03678 Selenicereus undatus HOM05D004088 ORTHO05D010054 6.8e-10 68.9 77 39.0
SGA_v2.0_scaffold54G19493 Striga asiatica HOM05D009041 ORTHO05D010054 1.2e-09 68.2 59 45.8
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 2.0e-09 67.4 95 37.9
EL10Ac2g03240 Beta vulgaris HOM05D000045 ORTHO05D000695 4.4e-09 66.2 95 37.9
EL10Ac1g01998 Beta vulgaris HOM05D000045 ORTHO05D010054 5.7e-09 65.9 101 36.6
EL10Ac4g08128 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-09 65.5 95 37.9
EL10Ac4g09892 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-09 65.5 95 37.9
EL10Ac5g11529 Beta vulgaris HOM05D000045 ORTHO05D000067 7.5e-09 65.5 95 37.9
Hund10326 Selenicereus undatus HOM05D020589 ORTHO05D010054 7.5e-09 65.5 66 39.4
EL10Ac7g17203 Beta vulgaris HOM05D000045 ORTHO05D010054 9.8e-09 65.1 84 36.9
EL10Ac4g08127 Beta vulgaris HOM05D000045 ORTHO05D000067 1.3e-08 64.7 95 37.9
EL10Ac9g21079 Beta vulgaris HOM05D000045 ORTHO05D000695 1.3e-08 64.7 95 37.9
Medtr6g060410 Medicago truncatula HOM05D009041 ORTHO05D010054 1.7e-08 64.3 82 39.0
EL10Ac1g01956 Beta vulgaris HOM05D000045 ORTHO05D010054 2.9e-08 63.5 95 36.8
Medtr4g080290 Medicago truncatula HOM05D009041 ORTHO05D010054 4.9e-08 62.8 82 37.8
HanXRQChr14g0449641 Helianthus annuus HOM05D000045 ORTHO05D000067 6.4e-08 62.4 69 39.1
EL10Ac4g09061 Beta vulgaris HOM05D010653 ORTHO05D013151 8.3e-08 62.0 134 29.9
TPR.G36565 Trifolium pratense HOM05D009041 ORTHO05D010054 8.3e-08 62.0 86 43.0
SGA_v2.0_scaffold20G09063 Striga asiatica HOM05D009041 ORTHO05D010054 1.1e-07 61.6 37 75.7
HanXRQChr08g0223531 Helianthus annuus HOM05D000045 ORTHO05D000067 1.4e-07 61.2 68 44.1
EL10Ac5g11838 Beta vulgaris HOM05D000045 ORTHO05D010054 1.8e-07 60.8 103 35.0
Aqoxy2G04102 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 3.2e-07 60.1 84 38.1
AUR62035444 Chenopodium quinoa HOM05D009508 ORTHO05D000695 4.1e-07 59.7 108 34.3
Medtr1g013060 Medicago truncatula HOM05D000045 ORTHO05D010054 4.1e-07 59.7 68 41.2
ECA240G0952 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.4e-07 59.3 93 39.8
AUR62024057 Chenopodium quinoa HOM05D000045 ORTHO05D000695 7.0e-07 58.9 74 40.5
ECA248G3866 Erigeron canadensis HOM05D000045 ORTHO05D000067 7.0e-07 58.9 69 43.5
EL10Ac2g03825 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-07 58.5 103 34.0
EL10Ac6g15511 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-07 58.5 103 34.0
EL10Ac8g19823 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-07 58.5 103 34.0
EL10Ac9g21271 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-07 58.5 103 34.0
EL10Ac9g22734 Beta vulgaris HOM05D000045 ORTHO05D010054 9.2e-07 58.5 103 34.0
CDE05G1292 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 2.0e-06 57.4 97 35.1
CDE05G1679 Ceratophyllum demersum HOM05D000045 ORTHO05D000611 2.0e-06 57.4 97 35.1
PSO732G0561 Papaver somniferum HOM05D000045 ORTHO05D000611 2.0e-06 57.4 84 34.5
EL10Ac1g02190 Beta vulgaris HOM05D000045 ORTHO05D010054 2.7e-06 57.0 103 33.0
HanXRQChr09g0260181 Helianthus annuus HOM05D000045 ORTHO05D010054 2.7e-06 57.0 102 34.3
TAR376G0491 Trochodendron aralioides HOM05D000045 ORTHO05D000067 2.7e-06 57.0 88 33.0
EL10Ac8g19517 Beta vulgaris HOM05D000045 ORTHO05D010054 3.5e-06 56.6 108 31.5
ECA247G1397 Erigeron canadensis HOM05D000583 ORTHO05D000442 3.5e-06 56.6 86 38.4
EL10Ac8g19058 Beta vulgaris HOM05D000045 ORTHO05D010054 4.6e-06 56.2 89 33.7
ECA234G2985 Erigeron canadensis HOM05D003566 ORTHO05D005288 4.6e-06 56.2 80 36.2
ECA236G4481 Erigeron canadensis HOM05D000045 ORTHO05D000067 4.6e-06 56.2 80 36.2
GSVIVG01012789001 Vitis vinifera HOM05D000045 ORTHO05D037848 5.9e-06 55.8 71 39.4
EL10Ac1g01865 Beta vulgaris HOM05D000045 ORTHO05D010054 7.8e-06 55.5 103 33.0
ECA232G4828 Erigeron canadensis HOM05D000014 ORTHO05D000093 7.8e-06 55.5 93 38.7


User provided reference genes

Program Settings