Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 6.7e-102 374.0 188 100.0
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 2.2e-81 305.8 188 80.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.4e-78 296.6 186 78.5
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 1.4e-70 270.0 191 73.3
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 4.0e-70 268.5 191 70.7
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.4e-69 265.4 179 73.7
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 7.5e-69 264.2 181 72.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 9.8e-69 263.8 179 73.2
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 2.2e-68 262.7 176 72.7
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 6.3e-68 261.2 178 71.3
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 1.4e-67 260.0 179 72.6
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 1.4e-67 260.0 179 70.9
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.8e-67 259.6 180 71.7
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.8e-67 259.6 188 67.0
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 4.1e-67 258.5 180 69.4
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 9.1e-67 257.3 190 70.5
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.2e-66 256.9 177 71.2
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.2e-66 256.9 189 70.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.2e-66 256.9 186 69.4
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.6e-66 256.5 180 71.7
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.0e-66 256.1 188 67.6
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.0e-66 256.1 188 66.5
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 3.5e-66 255.4 182 71.4
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.5e-66 255.4 188 67.0
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 4.5e-66 255.0 179 71.5
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 4.5e-66 255.0 183 68.9
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 4.5e-66 255.0 181 69.6
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 5.9e-66 254.6 179 70.9
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.0e-65 253.8 183 72.1
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 1.3e-65 253.4 189 69.3
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.7e-65 253.1 179 69.8
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 2.3e-65 252.7 183 68.3
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.9e-65 252.3 188 66.5
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 3.8e-65 251.9 180 67.8
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 5.0e-65 251.5 165 73.3
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 5.0e-65 251.5 179 69.8
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 6.5e-65 251.1 188 66.0
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 8.6e-65 250.8 181 69.6
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.1e-64 250.4 159 76.7
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.1e-64 250.4 174 70.7
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 4.2e-64 248.4 179 70.9
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 5.5e-64 248.1 180 71.1
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.2e-64 247.7 181 68.5
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 7.2e-64 247.7 190 67.4
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 9.5e-64 247.3 165 70.3
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.2e-63 246.9 176 68.8
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.6e-63 246.5 181 68.0
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 2.8e-63 245.7 180 66.7
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 3.6e-63 245.4 183 68.9
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 6.1e-63 244.6 177 68.9
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.0e-62 243.8 180 66.7
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.4e-62 243.4 146 84.9
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 6.8e-62 241.1 183 68.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 8.8e-62 240.7 171 66.7
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.2e-61 240.4 161 71.4
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.5e-61 240.0 178 69.1
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 2.6e-61 239.2 179 69.3
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 2.6e-61 239.2 175 69.7
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 3.4e-61 238.8 179 67.0
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 4.4e-61 238.4 178 68.5
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 7.5e-61 237.7 177 61.6
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.3e-60 236.9 172 68.6
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.8e-60 235.7 177 68.4
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 2.8e-60 235.7 162 71.0
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 3.1e-59 232.3 180 66.1
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 3.1e-59 232.3 156 71.8
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.2e-58 230.3 173 66.5
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 3.5e-58 228.8 180 63.9
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 2.3e-57 226.1 180 65.6
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 6.6e-57 224.6 169 66.3
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.5e-56 223.4 169 65.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 1.9e-56 223.0 169 65.1
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 1.9e-56 223.0 169 65.1
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.5e-56 222.6 173 63.6
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 3.3e-56 222.2 170 68.2
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 4.3e-56 221.9 169 64.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 4.3e-56 221.9 169 64.5
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 5.6e-56 221.5 170 67.6
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 5.6e-56 221.5 169 64.5
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 7.3e-56 221.1 184 62.0
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.2e-55 220.3 240 50.0
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.8e-55 219.2 158 67.7
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.6e-55 218.8 147 70.7
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 8.0e-55 217.6 136 78.7
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.0e-54 217.2 162 66.0
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 5.2e-54 214.9 167 63.5
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 7.5e-53 211.1 152 70.4
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 6.4e-52 208.0 172 60.5
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.4e-51 206.8 172 58.7
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.0e-50 203.0 132 75.0
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 7.3e-48 194.5 136 70.6
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 2.8e-47 192.6 132 71.2
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 2.9e-44 182.6 168 53.6
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 6.0e-42 174.9 122 70.5
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.0e-41 172.6 183 51.9
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.4e-38 163.7 197 49.7
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 6.4e-36 154.8 146 53.4
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 8.3e-36 154.5 148 56.1
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.2e-35 151.0 167 52.1
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 8.9e-30 134.4 101 68.3
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 8.9e-30 134.4 83 73.5
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.2e-26 124.0 172 41.3
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 1.2e-23 114.0 122 48.4
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 2.8e-23 112.8 87 62.1
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 6.9e-22 108.2 185 34.6
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 3.4e-21 105.9 80 62.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.9e-19 100.1 168 40.5
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 4.2e-19 99.0 74 64.9
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 6.6e-17 91.7 138 38.4
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.3e-15 87.4 61 63.9
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.9e-08 63.5 40 75.0
CBR_g32467 Chara braunii HOM05D007018 ORTHO05D008887 9.0e-06 54.7 94 38.3


User provided reference genes

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