Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold365G50016 Striga asiatica HOM05D011572 ORTHO05D006517 9.9e-222 773.1 374 100.0
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 8.9e-215 750.0 374 97.3
SGA_v2.0_scaffold41G15869 Striga asiatica HOM05D011572 ORTHO05D006517 9.6e-185 650.2 318 97.8
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 3.4e-182 641.7 360 87.2
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 5.9e-166 587.8 376 78.2
SGA_v2.0_scaffold12G06313 Striga asiatica HOM05D011572 ORTHO05D006517 1.0e-130 470.7 308 76.3
SGA_v2.0_scaffold9G04869 Striga asiatica HOM05D011572 ORTHO05D006517 2.8e-43 180.3 246 42.7
SGA_v2.0_scaffold502G52512 Striga asiatica HOM05D011572 ORTHO05D006517 2.6e-36 157.1 85 88.2
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.4e-26 124.8 183 38.3
Thecc.02G036800 Theobroma cacao HOM05D008181 ORTHO05D010459 4.4e-20 103.2 379 25.3
SGA_v2.0_scaffold187G40267 Striga asiatica HOM05D011572 ORTHO05D006517 6.3e-19 99.4 118 41.5
SalBow7G0014 Salvia bowleyana HOM05D008082 ORTHO05D006517 8.3e-19 99.0 266 28.9
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 3.1e-18 97.1 322 27.0
SalBow8G0214 Salvia bowleyana HOM05D031689 ORTHO05D006517 7.0e-18 95.9 305 28.2
SalBow8G1323 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.2e-17 95.1 264 27.3
SalBow2G3428 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.6e-17 94.7 264 27.3
SalBow2G3580 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.6e-17 94.7 264 27.3
SalBow4G1611 Salvia bowleyana HOM05D009699 ORTHO05D006517 1.7e-16 91.3 253 26.1
SalBow1G3545 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.3e-16 90.9 266 27.4
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 2.9e-16 90.5 274 25.5
SalBow1G5862 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.9e-15 87.8 264 26.9
SalBow4G1541 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.5e-15 85.5 264 27.7
Thecc.05G196700 Theobroma cacao HOM05D008181 ORTHO05D010459 9.5e-15 85.5 256 26.6
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 4.7e-14 83.2 264 28.0
SalBow1G5422 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.8e-13 81.3 226 25.2
SalBow2G0951 Salvia bowleyana HOM05D015320 ORTHO05D006517 6.8e-13 79.3 213 27.7
Thecc.02G255800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.2e-12 78.6 156 29.5
SalBow3G1893 Salvia bowleyana HOM05D008082 ORTHO05D006517 1.5e-12 78.2 226 26.1
SalBow8G1146 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.5e-12 78.2 126 34.9
Thecc.05G178300 Theobroma cacao HOM05D008181 ORTHO05D010459 1.5e-12 78.2 203 25.6
SalBow3G1743 Salvia bowleyana HOM05D000011 ORTHO05D006517 2.0e-12 77.8 210 27.6
Thecc.07G103000 Theobroma cacao HOM05D008181 ORTHO05D021025 3.4e-12 77.0 198 27.8
SalBow1G7044 Salvia bowleyana HOM05D009699 ORTHO05D006517 4.4e-12 76.6 264 24.2
Thecc.05G225100 Theobroma cacao HOM05D008181 ORTHO05D010459 4.4e-12 76.6 181 24.9
SGA_v2.0_scaffold6G03233 Striga asiatica HOM05D001567 ORTHO05D001409 9.8e-12 75.5 36 80.6
SalBow5G1923 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.2e-11 74.3 229 25.3
Thecc.01G399000 Theobroma cacao HOM05D008181 ORTHO05D010459 2.2e-11 74.3 215 26.0
SalBow1G7517 Salvia bowleyana HOM05D010599 ORTHO05D006517 2.8e-11 73.9 140 30.7
SalBow1G6861 Salvia bowleyana HOM05D010599 ORTHO05D006517 3.7e-11 73.6 276 22.8
SalBow2G1190 Salvia bowleyana HOM05D010599 ORTHO05D006517 3.7e-11 73.6 276 22.8
Thecc.09G272400 Theobroma cacao HOM05D008181 ORTHO05D010459 3.7e-11 73.6 128 31.2
SalBow3G2968 Salvia bowleyana HOM05D031689 ORTHO05D006517 4.9e-11 73.2 140 33.6
Thecc.02G178200 Theobroma cacao HOM05D008181 ORTHO05D021025 1.1e-10 72.0 159 27.0
SalBow6G2617 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.2e-10 70.5 207 28.0
Thecc.06G125800 Theobroma cacao HOM05D008181 ORTHO05D010459 3.2e-10 70.5 154 31.2
SalBow3G2414 Salvia bowleyana HOM05D009699 ORTHO05D006517 4.1e-10 70.1 249 24.5
Thecc.04G033000 Theobroma cacao HOM05D008181 ORTHO05D010459 7.0e-10 69.3 156 28.2
Thecc.02G200300 Theobroma cacao HOM05D008181 ORTHO05D010459 9.2e-10 68.9 249 24.5
SalBow6G3176 Salvia bowleyana HOM05D010599 ORTHO05D006517 1.6e-09 68.2 274 23.7
Thecc.06G088800 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-09 68.2 251 25.1
Thecc.09G213300 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-09 68.2 234 22.2
PGSC0003DMG400000873 Solanum tuberosum HOM05D000679 ORTHO05D000137 2.0e-09 67.8 241 23.2
SalBow2G1060 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.7e-09 67.4 115 31.3
Thecc.05G143600 Theobroma cacao HOM05D008181 ORTHO05D021025 2.7e-09 67.4 108 32.4
SalBow3G1903 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.5e-09 67.0 146 30.1
SalBow6G1465 Salvia bowleyana HOM05D009699 ORTHO05D006517 3.5e-09 67.0 208 25.0
SalBow3G2031 Salvia bowleyana HOM05D011572 ORTHO05D006517 5.9e-09 66.2 153 26.8
SalBow1G5610 Salvia bowleyana HOM05D010599 ORTHO05D006517 2.3e-08 64.3 129 31.0
SalBow4G1733 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.3e-08 64.3 241 25.3
Thecc.10G115900 Theobroma cacao HOM05D008181 ORTHO05D010459 2.3e-08 64.3 127 27.6
SGA_v2.0_scaffold74G24697 Striga asiatica HOM05D011572 ORTHO05D006517 2.9e-08 63.9 64 51.6
CANSAT56G3729 Cannabis sativa HOM05D008058 ORTHO05D010564 3.9e-08 63.5 151 29.8
SalBow8G1284 Salvia bowleyana HOM05D008082 ORTHO05D006517 5.0e-08 63.2 241 23.7
SalBow6G6558 Salvia bowleyana HOM05D010599 ORTHO05D006517 8.6e-08 62.4 132 30.3
SGA_v2.0_scaffold844G53665 Striga asiatica HOM05D213144 ORTHO05D006517 8.6e-08 62.4 35 77.1
Thecc.06G009500 Theobroma cacao HOM05D008181 ORTHO05D010459 1.1e-07 62.0 109 31.2
CAN.G162.75 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-07 61.2 164 28.0
CANSAT56G1907 Cannabis sativa HOM05D008058 ORTHO05D010564 2.5e-07 60.8 140 27.9
SalBow1G7890 Salvia bowleyana HOM05D009699 ORTHO05D006517 2.5e-07 60.8 140 27.1
Thecc.02G184700 Theobroma cacao HOM05D008181 ORTHO05D021025 2.5e-07 60.8 87 32.2
SalBow7G1548 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.3e-07 60.5 212 23.6
SalBow7G3634 Salvia bowleyana HOM05D008082 ORTHO05D006517 3.3e-07 60.5 212 23.6
SalBow5G3432 Salvia bowleyana HOM05D009699 ORTHO05D006517 4.3e-07 60.1 181 25.4
Thecc.10G099400 Theobroma cacao HOM05D008181 ORTHO05D010459 4.3e-07 60.1 232 25.0
Lsat_1_v5_gn_8_18001 Lactuca sativa HOM05D009439 ORTHO05D010404 7.3e-07 59.3 151 25.2
Thecc.02G219700 Theobroma cacao HOM05D008181 ORTHO05D021025 7.3e-07 59.3 163 23.9
MELO3C033961.2 Cucumis melo HOM05D010240 ORTHO05D011271 9.5e-07 58.9 195 24.6
SalBow1G2008 Salvia bowleyana HOM05D008082 ORTHO05D006517 9.5e-07 58.9 175 28.0
CANSAT64G1886 Cannabis sativa HOM05D008058 ORTHO05D010564 1.2e-06 58.5 151 29.1
CANSAT64G1644 Cannabis sativa HOM05D008058 ORTHO05D010564 2.1e-06 57.8 213 24.4
Thecc.06G050300 Theobroma cacao HOM05D008181 ORTHO05D021025 2.8e-06 57.4 49 42.9
CAN.G698.12 Capsicum annuum HOM05D000541 ORTHO05D000137 3.6e-06 57.0 161 26.7
CAN.G179.14 Capsicum annuum HOM05D000541 ORTHO05D000137 4.7e-06 56.6 86 33.7


User provided reference genes

Program Settings