Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold365G50015 Striga asiatica HOM05D011572 ORTHO05D012893 1.1e-275 952.6 459 100.0
SGA_v2.0_scaffold954G53748 Striga asiatica HOM05D011572 ORTHO05D010459 7.1e-206 720.7 425 82.1
SGA_v2.0_scaffold45G17094 Striga asiatica HOM05D011572 ORTHO05D006517 5.1e-63 246.1 163 76.1
SGA_v2.0_scaffold125G33657 Striga asiatica HOM05D011572 ORTHO05D010459 1.5e-59 234.6 163 73.6
SGA_v2.0_scaffold22G09842 Striga asiatica HOM05D011572 ORTHO05D006517 4.8e-53 213.0 127 83.5
SGA_v2.0_scaffold2719G54189 Striga asiatica HOM05D011572 ORTHO05D010459 4.0e-47 193.4 128 75.0
SGA_v2.0_scaffold206G41802 Striga asiatica HOM05D011572 ORTHO05D006517 1.8e-36 157.9 85 94.1
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 7.0e-28 129.4 140 55.0
Atru.chr8.857 Acer truncatum HOM05D008181 ORTHO05D010459 1.1e-20 105.5 220 30.5
Sed0000312 Sechium edule HOM05D007907 ORTHO05D009079 1.1e-20 105.5 312 27.2
CsaV3_6G042820 Cucumis sativus L. HOM05D007907 ORTHO05D009079 3.9e-18 97.1 308 26.6
PSO339G4311 Papaver somniferum HOM05D009891 ORTHO05D009626 1.5e-17 95.1 239 28.0
PSO384G0927 Papaver somniferum HOM05D009891 ORTHO05D009626 1.5e-17 95.1 284 26.1
Thecc.10G054600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.5e-17 95.1 284 26.8
MELO3C007522.2 Cucumis melo HOM05D007907 ORTHO05D009079 2.5e-17 94.4 311 26.0
PSO339G5530 Papaver somniferum HOM05D009891 ORTHO05D009626 9.5e-17 92.4 271 26.2
HanXRQChr04g0099511 Helianthus annuus HOM05D010915 ORTHO05D010404 1.2e-16 92.0 276 27.5
PSO339G4551 Papaver somniferum HOM05D009891 ORTHO05D009626 1.2e-16 92.0 404 22.8
Thecc.01G188500 Theobroma cacao HOM05D008181 ORTHO05D010459 1.2e-16 92.0 268 26.1
Atru.chr7.61 Acer truncatum HOM05D008181 ORTHO05D010459 1.6e-16 91.7 169 32.5
Thecc.03G161900 Theobroma cacao HOM05D008181 ORTHO05D010459 1.6e-16 91.7 342 24.6
TWI18G0509 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.1e-16 91.3 276 27.5
HanXRQChr04g0099501 Helianthus annuus HOM05D010915 ORTHO05D010404 4.7e-16 90.1 269 26.0
PSO339G2393 Papaver somniferum HOM05D009891 ORTHO05D009626 8.0e-16 89.4 269 26.0
HanXRQChr04g0099531 Helianthus annuus HOM05D010915 ORTHO05D010404 1.1e-15 89.0 211 28.0
Atru.chr4.282 Acer truncatum HOM05D008181 ORTHO05D010459 2.3e-15 87.8 215 28.4
Oeu037738.1 Olea europaea HOM05D002262 ORTHO05D000482 4.0e-15 87.0 275 24.4
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 5.2e-15 86.7 263 27.4
TWI63G0135 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 5.2e-15 86.7 276 26.8
PSO384G3001 Papaver somniferum HOM05D009891 ORTHO05D009626 1.5e-14 85.1 266 26.3
PSO063G4195 Papaver somniferum HOM05D007816 ORTHO05D000397 5.8e-14 83.2 278 26.3
Lsat_1_v5_gn_4_99201 Lactuca sativa HOM05D009439 ORTHO05D010827 9.8e-14 82.4 389 22.4
PSO421G0071 Papaver somniferum HOM05D007816 ORTHO05D000397 9.8e-14 82.4 278 25.9
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 2.2e-13 81.3 256 22.3
TWI75G0282 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.2e-13 81.3 294 24.5
TWI75G0551 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.2e-13 81.3 276 25.7
TWI59G0262 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 2.9e-13 80.9 294 24.5
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 6.4e-13 79.7 257 23.7
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.3e-13 79.3 280 22.9
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 8.3e-13 79.3 235 25.1
TWI14G0228 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.1e-12 79.0 295 24.1
Atru.chr2.2590 Acer truncatum HOM05D008181 ORTHO05D010459 1.9e-12 78.2 177 27.7
Thecc.09G121600 Theobroma cacao HOM05D008181 ORTHO05D010459 1.9e-12 78.2 310 23.2
Thecc.04G032800 Theobroma cacao HOM05D008181 ORTHO05D010459 2.4e-12 77.8 215 26.0
PSO339G1629 Papaver somniferum HOM05D010112 ORTHO05D000397 4.1e-12 77.0 324 23.8
ECA234G3585 Erigeron canadensis HOM05D010915 ORTHO05D010404 5.4e-12 76.6 252 26.6
PSO170G4386 Papaver somniferum HOM05D007816 ORTHO05D000397 5.4e-12 76.6 283 25.8
Atru.chr13.1945 Acer truncatum HOM05D008181 ORTHO05D000397 7.0e-12 76.3 199 26.1
SalBow8G4995 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.0e-12 76.3 125 36.8
CANSAT21G1491 Cannabis sativa HOM05D001081 ORTHO05D001269 1.2e-11 75.5 254 28.3
Oeu048688.1 Olea europaea HOM05D002749 ORTHO05D000708 1.2e-11 75.5 234 24.8
Thecc.10G113200 Theobroma cacao HOM05D008181 ORTHO05D010459 2.7e-11 74.3 182 27.5
SGA_v2.0_scaffold5241G54611 Striga asiatica HOM05D008585 ORTHO05D000397 4.6e-11 73.6 198 26.3
PSO339G4394 Papaver somniferum HOM05D009891 ORTHO05D009626 6.0e-11 73.2 256 24.2
Atru.chr7.854 Acer truncatum HOM05D008181 ORTHO05D010459 7.8e-11 72.8 158 27.8
ECA240G4572 Erigeron canadensis HOM05D010915 ORTHO05D010404 7.8e-11 72.8 273 23.8
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.0e-10 72.4 219 23.3
Nitab4.5_0010313g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.0e-10 72.4 298 22.8
Nitab4.5_0007360g0050 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.7e-10 71.6 281 22.8
SalBow6G4797 Salvia bowleyana HOM05D008082 ORTHO05D006517 2.3e-10 71.2 124 33.9
TWI77G0435 Tripterygium wilfordii HOM05D007816 ORTHO05D000482 2.3e-10 71.2 266 24.4
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 3.9e-10 70.5 339 23.6
Lsat_1_v5_gn_0_25881 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
Lsat_1_v5_gn_2_108261 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
Lsat_1_v5_gn_3_109740 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
Lsat_1_v5_gn_5_133480 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
Lsat_1_v5_gn_5_151300 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
Lsat_1_v5_gn_7_108221 Lactuca sativa HOM05D009439 ORTHO05D010404 3.9e-10 70.5 268 23.5
MBI11_g20915_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 5.0e-10 70.1 172 27.9
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 5.0e-10 70.1 257 23.7
Lsat_1_v5_gn_7_48561 Lactuca sativa HOM05D009439 ORTHO05D010404 6.6e-10 69.7 268 23.5
ECA234G1148 Erigeron canadensis HOM05D010915 ORTHO05D010404 1.5e-09 68.6 162 27.2
Nitab4.5_0001308g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-09 67.8 220 21.8
Oeu001559.1 Olea europaea HOM05D002749 ORTHO05D000708 2.5e-09 67.8 236 25.0
MELO3C033233.2 Cucumis melo HOM05D007907 ORTHO05D009079 3.3e-09 67.4 210 27.1
ECA234G3300 Erigeron canadensis HOM05D010915 ORTHO05D010404 3.3e-09 67.4 165 28.5
Oeu037089.1 Olea europaea HOM05D002262 ORTHO05D000708 3.3e-09 67.4 278 21.9
HanXRQChr11g0345531 Helianthus annuus HOM05D009439 ORTHO05D010404 4.3e-09 67.0 192 24.5
Lsat_1_v5_gn_4_80421 Lactuca sativa HOM05D009439 ORTHO05D010404 4.3e-09 67.0 268 23.1
MBI18_g31800_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 4.3e-09 67.0 177 27.7
CANSAT56G1481 Cannabis sativa HOM05D009472 ORTHO05D000482 5.6e-09 66.6 283 26.9
MBI13_g33565_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 7.3e-09 66.2 168 26.2
MBI17_g47059_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 7.3e-09 66.2 170 26.5
SalBow8G4192 Salvia bowleyana HOM05D008082 ORTHO05D006517 7.3e-09 66.2 108 33.3
TWI38G0271 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 9.5e-09 65.9 234 24.8
Lsat_1_v5_gn_6_59841 Lactuca sativa HOM05D009439 ORTHO05D010404 1.2e-08 65.5 265 23.8
TWI73G0375 Tripterygium wilfordii HOM05D007816 ORTHO05D000397 1.2e-08 65.5 273 23.4
Lsat_1_v5_gn_9_102201 Lactuca sativa HOM05D009439 ORTHO05D010404 1.6e-08 65.1 277 23.5
CANSAT01G1142 Cannabis sativa HOM05D009472 ORTHO05D000482 2.1e-08 64.7 281 24.2
Oeu038220.1 Olea europaea HOM05D002262 ORTHO05D000482 2.1e-08 64.7 208 26.4
SalBow1G1842 Salvia bowleyana HOM05D021438 ORTHO05D012893 2.8e-08 64.3 99 33.3
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 2.8e-08 64.3 288 19.4
PGSC0003DMG400041208 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.6e-08 63.9 195 27.7
Oeu046189.1 Olea europaea HOM05D002749 ORTHO05D000708 4.7e-08 63.5 208 25.0
BcaB06g29622 Brassica carinata HOM05D000977 ORTHO05D001094 6.2e-08 63.2 245 23.3
Nitab4.5_0007137g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.2e-08 63.2 265 23.4
SalBow3G1891 Salvia bowleyana HOM05D008082 ORTHO05D006517 6.2e-08 63.2 108 38.0
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 8.1e-08 62.8 153 30.1
Thecc.06G057400 Theobroma cacao HOM05D008181 ORTHO05D010459 8.1e-08 62.8 287 22.0
Nitab4.5_0008423g0020 Nicotiana tabacum HOM05D005877 ORTHO05D000482 1.1e-07 62.4 170 29.4
Oeu027636.1 Olea europaea HOM05D002749 ORTHO05D000708 1.1e-07 62.4 185 23.8
SalBow6G6055 Salvia bowleyana HOM05D019042 ORTHO05D012893 1.1e-07 62.4 200 26.0
Lsat_1_v5_gn_4_153261 Lactuca sativa HOM05D009439 ORTHO05D010404 1.4e-07 62.0 269 23.0
Oeu012179.1 Olea europaea HOM05D002749 ORTHO05D000708 1.4e-07 62.0 235 23.0
ECA238G1550 Erigeron canadensis HOM05D010915 ORTHO05D010404 1.8e-07 61.6 233 26.6
Thecc.07G175000 Theobroma cacao HOM05D008181 ORTHO05D010459 1.8e-07 61.6 192 26.0
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 4.0e-07 60.5 346 21.4
SalBow3G2414 Salvia bowleyana HOM05D009699 ORTHO05D006517 5.2e-07 60.1 86 39.5
THA.LOC109116563 Tarenaya hassleriana HOM05D003554 ORTHO05D005130 5.2e-07 60.1 198 28.8
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 6.8e-07 59.7 195 23.6
SalBow6G1019 Salvia bowleyana HOM05D019042 ORTHO05D012893 6.8e-07 59.7 118 33.9
Sed0023954 Sechium edule HOM05D007907 ORTHO05D000482 6.8e-07 59.7 231 24.7
Thecc.04G148800 Theobroma cacao HOM05D008181 ORTHO05D010459 6.8e-07 59.7 173 27.7
Atru.chr11.709 Acer truncatum HOM05D008181 ORTHO05D010459 8.9e-07 59.3 187 23.0
Aa31LG6G7610 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.2e-06 58.9 240 22.5
MBI07_g00625_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 1.5e-06 58.5 145 26.9
Aa31LG8G11990 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-06 58.2 106 33.0
CANSAT80G2531 Cannabis sativa HOM05D009472 ORTHO05D000482 2.0e-06 58.2 219 24.2
Thhalv10021960m.g Eutrema salsugineum HOM05D000977 ORTHO05D001094 2.0e-06 58.2 133 27.1
Nitab4.5_0002315g0040 Nicotiana tabacum HOM05D005877 ORTHO05D000482 2.0e-06 58.2 165 28.5
Oeu044756.1 Olea europaea HOM05D007816 ORTHO05D000397 2.6e-06 57.8 208 25.5
Lsat_1_v5_gn_9_95301 Lactuca sativa HOM05D009439 ORTHO05D010404 3.4e-06 57.4 265 22.6
Nitab4.5_0004308g0010 Nicotiana tabacum HOM05D005877 ORTHO05D010356 3.4e-06 57.4 165 27.9
Oeu014738.1 Olea europaea HOM05D002749 ORTHO05D000708 3.4e-06 57.4 168 25.6
MBI12_g22855_MAGBIO Magnolia biondii HOM05D002823 ORTHO05D003025 4.4e-06 57.0 168 28.0
Thecc.07G043200 Theobroma cacao HOM05D008181 ORTHO05D010459 4.4e-06 57.0 229 23.6
SalBow5G0575 Salvia bowleyana HOM05D019042 ORTHO05D012893 5.8e-06 56.6 194 25.3
Oeu045265.1 Olea europaea HOM05D002749 ORTHO05D000708 7.5e-06 56.2 183 25.7
SGA_v2.0_scaffold219G42531 Striga asiatica HOM05D002262 ORTHO05D000482 9.9e-06 55.8 241 25.3


User provided reference genes

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