Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold364G49968 Striga asiatica HOM05D007043 ORTHO05D008951 1.2e-109 399.8 198 100.0
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 3.1e-33 146.0 188 46.3
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 2.6e-32 142.9 187 45.5
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.5e-32 142.1 188 44.1
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 4.5e-32 142.1 184 46.2
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 1.7e-31 140.2 187 44.4
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 2.9e-31 139.4 188 43.6
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 2.9e-31 139.4 188 43.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.8e-31 139.0 185 44.3
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 5.0e-31 138.7 187 44.4
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 5.5e-30 135.2 187 42.8
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 1.6e-29 133.7 199 43.2
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 3.6e-29 132.5 188 41.5
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 3.6e-29 132.5 186 44.1
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 8.0e-29 131.3 193 40.9
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 1.0e-28 131.0 187 42.2
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.0e-28 131.0 187 42.2
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 1.0e-28 131.0 182 43.4
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 1.0e-28 131.0 182 40.7
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 1.4e-28 130.6 199 43.2
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.4e-28 130.6 180 43.9
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 1.4e-28 130.6 187 42.2
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 1.4e-28 130.6 197 41.1
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-28 130.6 187 42.8
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.4e-28 130.6 187 42.8
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 2.3e-28 129.8 188 41.5
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 2.3e-28 129.8 183 44.3
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 3.0e-28 129.4 187 40.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.0e-28 129.0 181 40.9
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 4.0e-28 129.0 187 39.6
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 4.0e-28 129.0 187 39.6
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 5.2e-28 128.6 185 41.1
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 5.2e-28 128.6 188 43.6
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 5.2e-28 128.6 190 39.5
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 6.7e-28 128.3 187 40.1
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.1e-27 127.5 190 43.7
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 1.1e-27 127.5 182 42.3
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 1.1e-27 127.5 182 43.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 1.1e-27 127.5 195 41.0
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 1.5e-27 127.1 185 38.4
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.5e-27 127.1 188 41.5
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 1.5e-27 127.1 181 39.8
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 1.5e-27 127.1 195 41.0
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.0e-27 126.7 180 41.7
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 2.0e-27 126.7 190 43.7
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 2.0e-27 126.7 182 43.4
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 2.0e-27 126.7 188 41.0
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 2.6e-27 126.3 184 38.6
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 2.6e-27 126.3 184 38.6
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.6e-27 126.3 181 42.5
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 3.3e-27 125.9 165 44.2
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 3.3e-27 125.9 187 39.6
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 3.3e-27 125.9 185 40.5
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 4.4e-27 125.6 197 37.6
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 4.4e-27 125.6 182 42.3
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 5.7e-27 125.2 183 40.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 5.7e-27 125.2 184 42.4
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 7.5e-27 124.8 181 42.0
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 7.5e-27 124.8 193 40.4
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 7.5e-27 124.8 190 40.0
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 9.7e-27 124.4 194 40.2
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 9.7e-27 124.4 193 40.4
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.7e-26 123.6 184 38.0
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 2.2e-26 123.2 189 39.7
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.8e-26 122.9 210 39.0
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 3.7e-26 122.5 180 41.1
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 4.8e-26 122.1 187 39.6
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.8e-26 122.1 186 43.0
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 8.2e-26 121.3 196 37.2
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 8.2e-26 121.3 190 38.9
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 1.1e-25 120.9 187 38.0
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.4e-25 120.6 184 39.7
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.4e-25 120.6 186 38.7
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 1.8e-25 120.2 182 42.9
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 1.8e-25 120.2 164 45.1
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 4.1e-25 119.0 185 38.9
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 4.1e-25 119.0 188 38.8
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.1e-25 119.0 162 46.9
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 5.3e-25 118.6 184 37.5
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 7.0e-25 118.2 180 43.3
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 2.0e-24 116.7 189 41.3
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 2.7e-24 116.3 184 39.1
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 3.5e-24 115.9 181 38.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 4.5e-24 115.5 184 39.1
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 4.5e-24 115.5 163 41.1
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.9e-24 115.2 184 39.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 5.9e-24 115.2 184 39.1
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 2.9e-23 112.8 180 38.3
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 5.0e-23 112.1 181 38.1
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.0e-23 112.1 177 38.4
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.5e-22 110.5 168 39.3
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 1.9e-22 110.2 186 37.6
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 3.2e-22 109.4 177 40.1
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 4.2e-22 109.0 180 37.8
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 4.2e-22 109.0 191 37.7
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 4.2e-22 109.0 168 43.5
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 5.5e-22 108.6 171 39.8
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 3.6e-21 105.9 162 39.5
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 6.1e-21 105.1 131 45.8
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 1.8e-20 103.6 179 36.9
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 2.3e-20 103.2 180 37.8
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 8.8e-20 101.3 162 39.5
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 5.7e-19 98.6 157 38.2
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 2.2e-18 96.7 167 35.3
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 4.8e-18 95.5 183 31.1
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 9.4e-14 81.3 136 36.0
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.2e-13 80.9 186 35.5
Sabra05G0151000 Salix brachista HOM05D000032 ORTHO05D004353 2.7e-13 79.7 56 62.5
TPR.G793 Trifolium pratense HOM05D007043 ORTHO05D008951 2.7e-13 79.7 68 52.9
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.7e-10 69.3 183 30.6
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 3.7e-10 69.3 188 30.9
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.5e-06 57.4 185 27.0


User provided reference genes

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