Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold364G49965 Striga asiatica HOM05D002293 ORTHO05D005475 3.8e-166 588.2 317 100.0
MSTRG.24489 Avicennia marina HOM05D002293 ORTHO05D005475 2.5e-101 372.9 317 67.5
Migut.N02943 Erythranthe guttata HOM05D002293 ORTHO05D005475 7.6e-98 361.3 317 65.3
Oeu046075.1 Olea europaea HOM05D002293 ORTHO05D005475 6.4e-97 358.2 317 64.0
SGA_v2.0_scaffold54G19692 Striga asiatica HOM05D002293 ORTHO05D005475 1.0e-94 350.9 317 66.2
SalBow6G4022 Salvia bowleyana HOM05D002293 ORTHO05D005475 1.5e-93 347.1 318 63.2
Dinv41022 Davidia involucrata HOM05D002293 ORTHO05D005475 5.4e-88 328.6 317 59.6
Lsat_1_v5_gn_1_5861 Lactuca sativa HOM05D002293 ORTHO05D005475 2.7e-87 326.2 313 62.0
Hma1.2p1_0358F.1_g134890 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.5e-87 325.9 317 59.9
Hma1.2p1_2282F.1_g318820 Hydrangea macrophylla HOM05D002293 ORTHO05D005475 3.5e-87 325.9 317 59.3
Nn3g18603 Nelumbo nucifera HOM05D002293 ORTHO05D005475 5.1e-86 322.0 317 59.9
ClCG01G015980 Citrullus lanatus HOM05D002293 ORTHO05D005475 1.1e-85 320.9 198 83.8
Sed0002744 Sechium edule HOM05D002293 ORTHO05D005475 1.9e-85 320.1 198 83.3
Eucgr.H04880 Eucalyptus grandis HOM05D002293 ORTHO05D005475 5.6e-85 318.5 198 83.3
CiPaw.04G090200 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.8e-84 316.2 198 82.3
Gohir.A11G054000 Gossypium hirsutum HOM05D002293 ORTHO05D005475 2.8e-84 316.2 317 58.7
CsaV3_6G042260 Cucumis sativus L. HOM05D002293 ORTHO05D005475 4.8e-84 315.5 198 81.8
MD01G1021000 Malus domestica HOM05D002293 ORTHO05D005475 4.8e-84 315.5 198 82.3
GSVIVG01022249001 Vitis vinifera HOM05D002293 ORTHO05D005475 4.8e-84 315.5 198 82.8
Actinidia12214 Actinidia chinensis HOM05D002293 ORTHO05D005475 1.1e-83 314.3 198 82.3
Prupe.6G169300 Prunus persica HOM05D002293 ORTHO05D005475 1.4e-83 313.9 198 81.3
CiPaw.03G133000 Carya illinoinensis HOM05D002293 ORTHO05D005475 2.4e-83 313.2 198 80.8
QL06p031785 Quercus lobata HOM05D002293 ORTHO05D005475 2.4e-83 313.2 197 81.2
Gohir.D11G057500 Gossypium hirsutum HOM05D002293 ORTHO05D005475 4.0e-83 312.4 317 58.0
Manes.12G143700 Manihot esculenta HOM05D002293 ORTHO05D005475 4.0e-83 312.4 198 81.3
unitig_8.g4827 Utricularia gibba HOM05D002293 ORTHO05D005475 4.0e-83 312.4 317 57.7
Lj7A386T88 Lonicera japonica HOM05D002293 ORTHO05D005475 6.9e-83 311.6 196 82.7
MELO3C007468.2 Cucumis melo HOM05D002293 ORTHO05D005475 9.0e-83 311.2 196 81.6
Duzib187G0135 Durio zibethinus HOM05D002293 ORTHO05D005475 1.2e-82 310.8 196 81.1
Gorai.007G062700 Gossypium raimondii HOM05D002293 ORTHO05D005475 1.2e-82 310.8 317 58.0
TAR376G0974 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.2e-82 310.8 206 78.6
ECA247G2680 Erigeron canadensis HOM05D002293 ORTHO05D005475 2.0e-82 310.1 198 80.8
Haze_25060 Corylus avellana HOM05D002293 ORTHO05D005475 2.6e-82 309.7 198 80.3
PGR102G1541 Punica granatum HOM05D002293 ORTHO05D005475 2.6e-82 309.7 198 80.8
HanXRQChr04g0115601 Helianthus annuus HOM05D002293 ORTHO05D005475 3.4e-82 309.3 198 81.8
MD15G1331100 Malus domestica HOM05D002293 ORTHO05D005475 3.4e-82 309.3 198 80.8
Nn5g28871 Nelumbo nucifera HOM05D002293 ORTHO05D005475 3.4e-82 309.3 198 81.3
Sc03g0004490 Simmondsia chinensis HOM05D002293 ORTHO05D005475 3.4e-82 309.3 198 79.8
Cfa002767 Carpinus fangiana HOM05D002293 ORTHO05D005475 4.5e-82 308.9 198 79.8
Dinv42674 Davidia involucrata HOM05D002293 ORTHO05D005475 4.5e-82 308.9 198 79.3
CSS0016943 Camellia sinensis var. sinensis HOM05D002293 ORTHO05D005475 5.8e-82 308.5 198 80.3
Duzib264G1168 Durio zibethinus HOM05D002293 ORTHO05D005475 5.8e-82 308.5 198 78.3
Gohir.D11G228400 Gossypium hirsutum HOM05D002293 ORTHO05D005475 7.6e-82 308.1 203 76.8
Gohir.A11G196900 Gossypium hirsutum HOM05D002293 ORTHO05D005475 9.9e-82 307.8 203 77.3
Lj2A567T21 Lonicera japonica HOM05D002293 ORTHO05D005475 9.9e-82 307.8 196 80.1
vmacro08972 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 9.9e-82 307.8 198 79.8
Sc16g0004130 Simmondsia chinensis HOM05D002293 ORTHO05D005475 1.7e-81 307.0 196 81.1
Actinidia05381 Actinidia chinensis HOM05D002293 ORTHO05D005475 3.8e-81 305.8 198 80.3
Aqoxy6G00441 Aquilegia oxysepala HOM05D002293 ORTHO05D005475 4.9e-81 305.4 198 79.3
RcHm_v2.0_Chr2g0117231 Rosa chinensis HOM05D002293 ORTHO05D005475 4.9e-81 305.4 198 80.3
Ciclev10026373m.g Citrus clementina HOM05D002293 ORTHO05D005475 8.4e-81 304.7 198 79.3
Lsat_1_v5_gn_9_42461 Lactuca sativa HOM05D002293 ORTHO05D005475 8.4e-81 304.7 198 79.8
TWI31G0415 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.1e-80 304.3 198 79.3
Cpa.g.sc72.4 Carica papaya HOM05D002293 ORTHO05D005475 1.4e-80 303.9 198 78.8
HanXRQChr02g0042411 Helianthus annuus HOM05D002293 ORTHO05D005475 1.4e-80 303.9 198 79.8
TWI75G0492 Tripterygium wilfordii HOM05D002293 ORTHO05D005475 1.4e-80 303.9 198 79.3
PGSC0003DMG400025052 Solanum tuberosum HOM05D002293 ORTHO05D005475 1.9e-80 303.5 317 57.4
Sopen04g028170 Solanum pennellii HOM05D002293 ORTHO05D005475 2.4e-80 303.1 317 57.1
Solyc04g072047.1 Solanum lycopersicum HOM05D002293 ORTHO05D005475 3.2e-80 302.8 317 57.1
Atru.chr4.451 Acer truncatum HOM05D002293 ORTHO05D005475 4.2e-80 302.4 198 78.8
arahy.Tifrunner.gnm1.ann1.LE5EW2 Arachis hypogaea HOM05D002293 ORTHO05D005475 9.3e-80 301.2 321 57.3
Sabra07G0066700 Salix brachista HOM05D002293 ORTHO05D005475 2.7e-79 299.7 198 78.3
Nitab4.5_0004252g0010 Nicotiana tabacum HOM05D002293 ORTHO05D005475 6.0e-79 298.5 332 54.8
Thecc.01G115200 Theobroma cacao HOM05D002293 ORTHO05D005475 6.0e-79 298.5 317 54.6
CANSAT01G0963 Cannabis sativa HOM05D002293 ORTHO05D005475 7.9e-79 298.1 198 77.8
Nitab4.5_0001000g0170 Nicotiana tabacum HOM05D002293 ORTHO05D005475 7.9e-79 298.1 332 54.8
Potri.007G079500 Populus trichocarpa HOM05D002293 ORTHO05D005475 7.9e-79 298.1 198 77.8
Oeu061454.1 Olea europaea HOM05D002293 ORTHO05D005475 1.8e-78 297.0 356 51.1
PSO675G2787 Papaver somniferum HOM05D002293 ORTHO05D005475 3.0e-78 296.2 198 75.8
FAN28G2749 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.9e-78 295.8 198 78.3
FAN23G0553 Fragaria x ananassa HOM05D002293 ORTHO05D005475 5.1e-78 295.4 198 77.8
FAN26G3412 Fragaria x ananassa HOM05D002293 ORTHO05D005475 6.7e-78 295.0 198 77.8
FvH4_1g22890 Fragaria vesca HOM05D002293 ORTHO05D005475 1.1e-77 294.3 198 77.8
Nn2g12418 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.1e-77 294.3 317 55.8
Hund19634 Selenicereus undatus HOM05D002293 ORTHO05D005475 1.5e-77 293.9 198 77.8
VMungo0251G0649 Vigna mungo HOM05D002293 ORTHO05D005475 1.9e-77 293.5 199 76.4
Ah.02g125930 Amaranthus hybridus HOM05D002293 ORTHO05D005475 2.5e-77 293.1 196 77.0
CAN.G1252.8 Capsicum annuum HOM05D002293 ORTHO05D005475 2.5e-77 293.1 198 77.8
Glyma.05G184800 Glycine max HOM05D002293 ORTHO05D005475 2.5e-77 293.1 199 77.9
FAN19G1282 Fragaria x ananassa HOM05D002293 ORTHO05D005475 3.3e-77 292.7 198 77.8
Potri.005G085500 Populus trichocarpa HOM05D002293 ORTHO05D005475 3.3e-77 292.7 198 76.3
HPP92_010855 Vanilla planifolia HOM05D002293 ORTHO05D005475 3.3e-77 292.7 202 74.3
PSO541G6166 Papaver somniferum HOM05D002293 ORTHO05D005475 5.6e-77 292.0 198 74.7
ATR0736G207 Amborella trichopoda HOM05D002293 ORTHO05D005475 9.6e-77 291.2 198 75.3
Glyma.08G142800 Glycine max HOM05D002293 ORTHO05D005475 2.1e-76 290.0 199 75.9
Lj4g0016673 Lotus japonicus HOM05D002293 ORTHO05D005475 2.8e-76 289.7 199 76.4
AUR62003295 Chenopodium quinoa HOM05D002293 ORTHO05D005475 6.2e-76 288.5 317 53.6
Phvul.002G265700 Phaseolus vulgaris HOM05D002293 ORTHO05D005475 8.1e-76 288.1 199 75.4
Rhsim08G0005300 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.4e-75 287.3 239 66.1
Thhalv10000307m.g Eutrema salsugineum HOM05D002293 ORTHO05D005475 3.1e-75 286.2 215 68.4
arahy.Tifrunner.gnm1.ann1.GC7XSK Arachis hypogaea HOM05D002293 ORTHO05D005475 4.0e-75 285.8 198 75.3
AUR62027167 Chenopodium quinoa HOM05D002293 ORTHO05D005475 4.0e-75 285.8 198 74.7
Ca_17689_v3 Cicer arietinum L. HOM05D002293 ORTHO05D005475 4.0e-75 285.8 199 76.4
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 5.3e-75 285.4 201 70.6
A04p16460 Brassica napus HOM05D002293 ORTHO05D005475 6.9e-75 285.0 218 67.0
BraA04t17281Z Brassica rapa HOM05D002293 ORTHO05D005475 6.9e-75 285.0 202 70.8
BraA09t41184Z Brassica rapa HOM05D002293 ORTHO05D005475 9.0e-75 284.6 218 67.0
Sp4g00960 Schrenkiella parvula HOM05D002293 ORTHO05D005475 9.0e-75 284.6 202 70.3
BcaB06g27791 Brassica carinata HOM05D002293 ORTHO05D005475 1.2e-74 284.3 202 70.3
BcaB08g35009 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-74 283.9 202 70.8
BcaC02g08759 Brassica carinata HOM05D002293 ORTHO05D005475 1.5e-74 283.9 202 70.8
C04p50970 Brassica napus HOM05D002293 ORTHO05D005475 1.5e-74 283.9 202 70.8
TPR.G20796 Trifolium pratense HOM05D002293 ORTHO05D005475 1.5e-74 283.9 199 75.9
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 2.0e-74 283.5 198 73.7
THA.LOC104804134 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 2.0e-74 283.5 215 68.4
BcaC07g41114 Brassica carinata HOM05D002293 ORTHO05D005475 3.4e-74 282.7 202 70.3
A09p57920 Brassica napus HOM05D002293 ORTHO05D005475 3.4e-74 282.7 218 67.0
C08p41150 Brassica napus HOM05D002293 ORTHO05D005475 3.4e-74 282.7 202 70.3
BolC8t51682H Brassica oleracea HOM05D002293 ORTHO05D005475 3.4e-74 282.7 202 70.3
AT2G21870 Arabidopsis thaliana HOM05D002293 ORTHO05D005475 7.6e-74 281.6 202 69.3
Dinv19470 Davidia involucrata HOM05D002293 ORTHO05D005475 1.0e-73 281.2 177 80.8
EL10Ac6g14774 Beta vulgaris HOM05D002293 ORTHO05D005475 1.7e-73 280.4 198 71.2
Lalb_Chr07g0184761 Lupinus albus HOM05D002293 ORTHO05D005475 1.7e-73 280.4 198 73.2
THA.LOC104824852 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 1.7e-73 280.4 218 67.4
Duzib147G0641 Durio zibethinus HOM05D002293 ORTHO05D005475 2.2e-73 280.0 177 79.7
Gorai.007G246300 Gossypium raimondii HOM05D002293 ORTHO05D005475 2.9e-73 279.6 182 77.5
Medtr8g092040 Medicago truncatula HOM05D002293 ORTHO05D005475 2.9e-73 279.6 319 53.6
THA.LOC104807725 Tarenaya hassleriana HOM05D002293 ORTHO05D005475 4.9e-73 278.9 202 69.8
Carub.0004s0090 Capsella rubella HOM05D002293 ORTHO05D005475 3.2e-72 276.2 202 68.8
AL4G11180 Arabidopsis lyrata HOM05D002293 ORTHO05D005475 4.2e-72 275.8 196 69.9
Aa31LG7G14740 Aethionema arabicum HOM05D002293 ORTHO05D005475 1.2e-71 274.2 202 66.8
Sabra05G0070400 Salix brachista HOM05D002293 ORTHO05D005475 2.1e-71 273.5 247 61.9
Zm00001eb209000 Zea mays HOM05D002293 ORTHO05D005475 3.5e-71 272.7 200 68.5
Zm00001eb231220 Zea mays HOM05D002293 ORTHO05D005475 4.6e-71 272.3 198 69.2
CARHR112910 Cardamine hirsuta HOM05D002293 ORTHO05D005475 1.8e-70 270.4 202 65.8
Lalb_Chr12g0203481 Lupinus albus HOM05D002293 ORTHO05D005475 5.1e-70 268.9 198 70.7
Ah.03g141640 Amaranthus hybridus HOM05D002293 ORTHO05D005475 4.8e-68 262.3 180 75.0
Glyma.14G174100 Glycine max HOM05D002293 ORTHO05D005475 8.2e-68 261.5 175 77.7
COL.COLO4_10988 Corchorus olitorius HOM05D002293 ORTHO05D005475 1.3e-65 254.2 188 69.7
Peaxi162Scf17813g00005 Petunia axillaris HOM05D002293 ORTHO05D005475 1.4e-59 234.2 155 80.0
TAR625G1205 Trochodendron aralioides HOM05D002293 ORTHO05D005475 1.4e-59 234.2 196 66.3
Psat0s281g0080 Pisum sativum HOM05D002293 ORTHO05D005475 1.4e-54 217.6 199 60.8
Hund03526 Selenicereus undatus HOM05D002293 ORTHO05D005475 2.3e-54 216.9 177 67.2
Haze_25047 Corylus avellana HOM05D002293 ORTHO05D005475 1.3e-52 211.1 136 77.2
TAR381G0840 Trochodendron aralioides HOM05D002293 ORTHO05D005475 2.8e-52 209.9 136 76.5
Zm00001eb114730 Zea mays HOM05D002293 ORTHO05D005475 1.2e-47 194.5 155 63.2
CDE04G0337 Ceratophyllum demersum HOM05D002293 ORTHO05D005475 7.9e-47 191.8 167 61.1
Rhsim10G0148500 Rhododendron simsii HOM05D002293 ORTHO05D005475 1.0e-38 164.9 149 60.4
Lalb_Chr13g0296261 Lupinus albus HOM05D002293 ORTHO05D005475 2.3e-38 163.7 112 75.0
Mapoly0014s0184 Marchantia polymorpha HOM05D002293 ORTHO05D005475 1.9e-32 144.1 198 42.9
AagrBONN_evm.TU.Sc2ySwM_117.3341 Anthoceros agrestis HOM05D002293 ORTHO05D005475 5.7e-29 132.5 197 37.6
HPP92_010897 Vanilla planifolia HOM05D002293 ORTHO05D005475 6.3e-28 129.0 128 57.8
vmacro12893 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 1.1e-27 128.3 145 54.5
Nn8g40924 Nelumbo nucifera HOM05D002293 ORTHO05D005475 1.6e-26 124.4 183 45.9
Pp3c9_7910 Physcomitrium patens HOM05D002293 ORTHO05D005475 3.5e-26 123.2 200 37.0
vmacro18642 Vaccinium macrocarpon HOM05D002293 ORTHO05D005475 6.5e-25 119.0 236 39.0
Lalb_Chr13g0296251 Lupinus albus HOM05D002293 ORTHO05D005475 5.5e-24 115.9 87 65.5
CBR_g39756 Chara braunii HOM05D002293 ORTHO05D005475 2.3e-22 110.5 184 34.2
CBR_g72646 Chara braunii HOM05D002293 ORTHO05D005475 3.4e-21 106.7 183 32.8
unitig_744.g24089 Utricularia gibba HOM05D002293 ORTHO05D005475 7.0e-19 99.0 63 82.5
Peaxi162Scf00226g00011 Petunia axillaris HOM05D002293 ORTHO05D005475 2.3e-17 94.0 173 38.7
Gohir.D08G112008 Gossypium hirsutum HOM05D001556 ORTHO05D005475 1.5e-13 81.3 101 48.5
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 4.4e-13 79.7 50 80.0
Nn2g12848 Nelumbo nucifera HOM05D002293 ORTHO05D005475 7.5e-13 79.0 181 37.0
SEGI_39212 Sequoiadendron giganteum HOM05D002293 ORTHO05D005475 2.9e-12 77.0 69 68.1
SMO367G0772 Selaginella moellendorffii HOM05D002293 ORTHO05D005475 3.0e-09 67.0 197 29.9
BcaC08g42952 Brassica carinata HOM05D004411 ORTHO05D032662 4.7e-07 59.7 41 78.0
BcaC09g49352 Brassica carinata HOM05D000853 ORTHO05D000723 6.2e-07 59.3 40 80.0


User provided reference genes

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