Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold363G49953 Striga asiatica HOM05D004421 ORTHO05D005227 2.3e-54 215.3 109 100.0
SGA_v2.0_scaffold392G50685 Striga asiatica HOM05D004421 ORTHO05D005227 1.4e-48 196.1 109 90.8
SGA_v2.0_scaffold159G37698 Striga asiatica HOM05D004421 ORTHO05D005227 5.7e-45 184.1 101 92.1
Oeu013122.1 Olea europaea HOM05D004421 ORTHO05D005227 4.8e-44 181.0 109 84.4
MSTRG.12990 Avicennia marina HOM05D004421 ORTHO05D005227 2.6e-42 175.3 102 85.3
Oeu054302.1 Olea europaea HOM05D004421 ORTHO05D005227 7.7e-42 173.7 109 81.7
unitig_748.g8294 Utricularia gibba HOM05D004421 ORTHO05D005227 6.5e-41 170.6 98 86.7
MSTRG.14457 Avicennia marina HOM05D004421 ORTHO05D005227 8.5e-41 170.2 109 79.8
CAN.G149.31 Capsicum annuum HOM05D004421 ORTHO05D005227 8.5e-41 170.2 105 81.9
SalBow3G0779 Salvia bowleyana HOM05D004421 ORTHO05D005227 8.5e-41 170.2 109 78.9
PGSC0003DMG400010437 Solanum tuberosum HOM05D004421 ORTHO05D005227 1.1e-40 169.9 105 81.9
Sed0012667 Sechium edule HOM05D004421 ORTHO05D005227 1.5e-40 169.5 104 79.8
Sopen02g017940 Solanum pennellii HOM05D004421 ORTHO05D005227 1.5e-40 169.5 105 81.9
Nitab4.5_0005588g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 1.9e-40 169.1 105 81.0
CAN.G358.76 Capsicum annuum HOM05D004421 ORTHO05D005227 2.5e-40 168.7 105 81.0
Peaxi162Scf00149g00049 Petunia axillaris HOM05D004421 ORTHO05D005227 2.5e-40 168.7 105 80.0
unitig_32.g10858 Utricularia gibba HOM05D004421 ORTHO05D005227 2.5e-40 168.7 98 86.7
Nitab4.5_0007533g0030 Nicotiana tabacum HOM05D004421 ORTHO05D005227 3.2e-40 168.3 105 79.0
Solyc02g068770.4 Solanum lycopersicum HOM05D004421 ORTHO05D005227 3.2e-40 168.3 105 81.0
Gorai.005G241500 Gossypium raimondii HOM05D004421 ORTHO05D005227 4.2e-40 167.9 105 81.0
Hma1.2p1_0445F.1_g154450 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.5e-40 167.5 107 79.4
TWI36G1565 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 5.5e-40 167.5 104 81.7
GSVIVG01036899001 Vitis vinifera HOM05D004421 ORTHO05D005227 5.5e-40 167.5 109 78.9
ECA236G3405 Erigeron canadensis HOM05D004421 ORTHO05D005227 9.4e-40 166.8 107 78.5
Peaxi162Scf00047g00850 Petunia axillaris HOM05D004421 ORTHO05D005227 1.2e-39 166.4 105 79.0
Cfa014325 Carpinus fangiana HOM05D004421 ORTHO05D005227 1.6e-39 166.0 107 77.6
Gohir.D02G213600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 1.6e-39 166.0 105 80.0
Nitab4.5_0001288g0200 Nicotiana tabacum HOM05D004421 ORTHO05D005227 2.1e-39 165.6 105 78.1
Gohir.A03G192600 Gossypium hirsutum HOM05D004421 ORTHO05D005227 2.7e-39 165.2 105 80.0
QL10p065434 Quercus lobata HOM05D004421 ORTHO05D005227 2.7e-39 165.2 107 76.6
QL10p065608 Quercus lobata HOM05D004421 ORTHO05D005227 3.6e-39 164.9 107 76.6
ClCG02G009100 Citrullus lanatus HOM05D004421 ORTHO05D005227 4.7e-39 164.5 104 78.8
HanXRQChr04g0126911 Helianthus annuus HOM05D004421 ORTHO05D005227 4.7e-39 164.5 104 79.8
Nitab4.5_0000138g0020 Nicotiana tabacum HOM05D004421 ORTHO05D005227 4.7e-39 164.5 105 79.0
TWI79G1637 Tripterygium wilfordii HOM05D004421 ORTHO05D005227 4.7e-39 164.5 104 80.8
vmacro09354 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 6.1e-39 164.1 105 77.1
CAN.G358.77 Capsicum annuum HOM05D004421 ORTHO05D005227 8.0e-39 163.7 105 79.0
FAN02G1632 Fragaria x ananassa HOM05D004421 ORTHO05D005227 8.0e-39 163.7 109 75.2
Glyma.14G047100 Glycine max HOM05D004421 ORTHO05D005227 8.0e-39 163.7 105 76.2
PGR042G0750 Punica granatum HOM05D004421 ORTHO05D005227 8.0e-39 163.7 107 77.6
QL08p031014 Quercus lobata HOM05D004421 ORTHO05D005227 8.0e-39 163.7 107 76.6
FvH4_6g42460 Fragaria vesca HOM05D004421 ORTHO05D005227 1.0e-38 163.3 109 75.2
FAN05G5559 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.0e-38 163.3 109 75.2
FAN09G1846 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.0e-38 163.3 109 75.2
FAN14G1774 Fragaria x ananassa HOM05D004421 ORTHO05D005227 1.0e-38 163.3 109 75.2
RcHm_v2.0_Chr2g0158361 Rosa chinensis HOM05D004421 ORTHO05D005227 1.0e-38 163.3 109 75.2
VMungo0647G1664 Vigna mungo HOM05D004421 ORTHO05D005227 1.4e-38 162.9 105 76.2
ATR0665G259 Amborella trichopoda HOM05D004421 ORTHO05D005227 1.8e-38 162.5 100 80.0
CSS0000360 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.8e-38 162.5 107 76.6
CSS0029217 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.8e-38 162.5 107 76.6
Potri.014G157400 Populus trichocarpa HOM05D004421 ORTHO05D005227 1.8e-38 162.5 107 76.6
Rhsim04G0051300 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.8e-38 162.5 107 78.5
AUR62030497 Chenopodium quinoa HOM05D004421 ORTHO05D005227 2.3e-38 162.2 102 79.4
LjContig00564g0020145 Lotus japonicus HOM05D004421 ORTHO05D005227 2.3e-38 162.2 104 77.9
LjContig00564g0024160 Lotus japonicus HOM05D004421 ORTHO05D005227 2.3e-38 162.2 104 77.9
Thecc.07G030200 Theobroma cacao HOM05D004421 ORTHO05D005227 2.3e-38 162.2 107 75.7
AUR62030797 Chenopodium quinoa HOM05D004421 ORTHO05D005227 3.0e-38 161.8 108 75.0
TAR629G1061 Trochodendron aralioides HOM05D004421 ORTHO05D005227 3.0e-38 161.8 109 77.1
Manes.13G067100 Manihot esculenta HOM05D004421 ORTHO05D005227 4.0e-38 161.4 107 75.7
Prupe.3G211700 Prunus persica HOM05D004421 ORTHO05D005227 4.0e-38 161.4 107 76.6
Hma1.2p1_0177F.1_g077900 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.2e-38 161.0 107 74.8
Hma1.2p1_0177F.1_g077905 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.2e-38 161.0 107 74.8
Lsat_1_v5_gn_7_92700 Lactuca sativa HOM05D004421 ORTHO05D005227 5.2e-38 161.0 107 75.7
MBI16_g23852_MAGBIO Magnolia biondii HOM05D004421 ORTHO05D005227 5.2e-38 161.0 110 74.5
Phvul.008G212200 Phaseolus vulgaris HOM05D004421 ORTHO05D005227 5.2e-38 161.0 105 74.3
Cpa.g.sc12.255 Carica papaya HOM05D004421 ORTHO05D005227 6.7e-38 160.6 105 76.2
Ciclev10009985m.g Citrus clementina HOM05D004421 ORTHO05D005227 6.7e-38 160.6 98 81.6
CsaV3_2G034620 Cucumis sativus L. HOM05D004421 ORTHO05D005227 6.7e-38 160.6 104 76.9
DCAR_019262 Daucus carota HOM05D004421 ORTHO05D005227 6.7e-38 160.6 107 74.8
LjContig00564g0000485 Lotus japonicus HOM05D004421 ORTHO05D005227 6.7e-38 160.6 104 76.9
LjContig00564g0024311 Lotus japonicus HOM05D004421 ORTHO05D005227 6.7e-38 160.6 104 76.9
CDE04G3645 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 8.8e-38 160.2 98 80.6
CANSAT64G1364 Cannabis sativa HOM05D004421 ORTHO05D005227 1.5e-37 159.5 104 78.8
Potri.002G225600 Populus trichocarpa HOM05D004421 ORTHO05D005227 1.5e-37 159.5 104 76.0
Ah.12g058680 Amaranthus hybridus HOM05D004421 ORTHO05D005227 2.0e-37 159.1 107 76.6
Eucgr.B01010 Eucalyptus grandis HOM05D004421 ORTHO05D005227 2.0e-37 159.1 109 75.2
Glyma.02G269800 Glycine max HOM05D004421 ORTHO05D005227 2.0e-37 159.1 105 74.3
Lalb_Chr10g0105671 Lupinus albus HOM05D004421 ORTHO05D005227 2.0e-37 159.1 104 78.8
arahy.Tifrunner.gnm1.ann1.J4LN0V Arachis hypogaea HOM05D004421 ORTHO05D005227 2.6e-37 158.7 104 76.0
CiPaw.08G089000 Carya illinoinensis HOM05D004421 ORTHO05D005227 2.6e-37 158.7 103 77.7
Haze_12777 Corylus avellana HOM05D004421 ORTHO05D005227 2.6e-37 158.7 109 73.4
THA.LOC104811627 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.6e-37 158.7 105 75.2
arahy.Tifrunner.gnm1.ann1.BKRM87 Arachis hypogaea HOM05D004421 ORTHO05D005227 3.3e-37 158.3 104 76.0
Sc12g0002130 Simmondsia chinensis HOM05D004421 ORTHO05D005227 3.3e-37 158.3 107 74.8
Aqoxy7G01112 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 5.7e-37 157.5 102 75.5
CiPaw.03G156500 Carya illinoinensis HOM05D004421 ORTHO05D005227 5.7e-37 157.5 103 75.7
Duzib128G1691 Durio zibethinus HOM05D004421 ORTHO05D005227 9.7e-37 156.8 105 76.2
Medtr8g016300 Medicago truncatula HOM05D004421 ORTHO05D005227 9.7e-37 156.8 104 77.9
Ca_23316_v3 Cicer arietinum L. HOM05D004421 ORTHO05D005227 1.3e-36 156.4 103 73.8
DCAR_012923 Daucus carota HOM05D004421 ORTHO05D005227 1.3e-36 156.4 107 74.8
Psat4g220560 Pisum sativum HOM05D004421 ORTHO05D005227 1.3e-36 156.4 103 75.7
Rhsim06G0166700 Rhododendron simsii HOM05D004421 ORTHO05D005227 1.3e-36 156.4 107 74.8
EL10Ac5g12553 Beta vulgaris HOM05D004421 ORTHO05D005227 1.7e-36 156.0 107 76.6
Sabra02G0172700 Salix brachista HOM05D004421 ORTHO05D005227 1.7e-36 156.0 104 74.0
BraA02t06048Z Brassica rapa HOM05D004421 ORTHO05D005227 2.2e-36 155.6 107 71.0
Medtr8g099150 Medicago truncatula HOM05D004421 ORTHO05D005227 2.2e-36 155.6 104 76.9
THA.LOC104813431 Tarenaya hassleriana HOM05D004421 ORTHO05D005227 2.2e-36 155.6 98 78.6
Atru.chr2.3508 Acer truncatum HOM05D004421 ORTHO05D005227 2.8e-36 155.2 98 78.6
Aqoxy6G00590 Aquilegia oxysepala HOM05D004421 ORTHO05D005227 6.3e-36 154.1 99 75.8
A02p09830 Brassica napus HOM05D004421 ORTHO05D005227 6.3e-36 154.1 107 70.1
CDE06G2669 Ceratophyllum demersum HOM05D004421 ORTHO05D005227 8.2e-36 153.7 98 77.6
Hund24697 Selenicereus undatus HOM05D004421 ORTHO05D005227 8.2e-36 153.7 105 78.1
Cc05_g02530 Coffea canephora HOM05D004421 ORTHO05D005227 1.4e-35 152.9 107 70.1
Aa31LG3G11160 Aethionema arabicum HOM05D004421 ORTHO05D005227 1.8e-35 152.5 107 69.2
Carub.0008s1546 Capsella rubella HOM05D004421 ORTHO05D005227 1.8e-35 152.5 107 72.0
Cc05_g14180 Coffea canephora HOM05D004421 ORTHO05D005227 1.8e-35 152.5 99 75.8
SHI33915 Sapria himalayana HOM05D004421 ORTHO05D005227 1.8e-35 152.5 101 74.3
BolC2t07739H Brassica oleracea HOM05D004421 ORTHO05D005227 2.4e-35 152.1 103 72.8
MELO3C019309.2 Cucumis melo HOM05D004421 ORTHO05D005227 2.4e-35 152.1 96 78.1
ECA234G2260 Erigeron canadensis HOM05D004421 ORTHO05D005227 2.4e-35 152.1 105 74.3
TPR.G7933 Trifolium pratense HOM05D004421 ORTHO05D005227 2.4e-35 152.1 104 75.0
Thhalv10015072m.g Eutrema salsugineum HOM05D004421 ORTHO05D005227 4.1e-35 151.4 101 73.3
Lsat_1_v5_gn_5_123820 Lactuca sativa HOM05D004421 ORTHO05D005227 5.3e-35 151.0 99 75.8
BcaB05g22185 Brassica carinata HOM05D004421 ORTHO05D005227 7.0e-35 150.6 101 72.3
C02p16370 Brassica napus HOM05D004421 ORTHO05D005227 7.0e-35 150.6 103 71.8
TPR.G1800 Trifolium pratense HOM05D004421 ORTHO05D005227 7.0e-35 150.6 104 74.0
AT5G55140 Arabidopsis thaliana HOM05D004421 ORTHO05D005227 9.1e-35 150.2 107 70.1
AL8G30670 Arabidopsis lyrata HOM05D004421 ORTHO05D005227 1.2e-34 149.8 107 69.2
PSO017G4413 Papaver somniferum HOM05D004421 ORTHO05D005227 1.2e-34 149.8 107 69.2
PSO675G5827 Papaver somniferum HOM05D004421 ORTHO05D005227 1.2e-34 149.8 107 69.2
CARHR268500 Cardamine hirsuta HOM05D004421 ORTHO05D005227 2.0e-34 149.1 107 71.0
Zm00001eb211500 Zea mays HOM05D004421 ORTHO05D005227 2.0e-34 149.1 97 77.3
BcaB08g35879 Brassica carinata HOM05D004421 ORTHO05D005227 4.5e-34 147.9 101 71.3
BcaC04g20265 Brassica carinata HOM05D004421 ORTHO05D005227 4.5e-34 147.9 101 71.3
BraA10t43337Z Brassica rapa HOM05D004421 ORTHO05D005227 4.5e-34 147.9 101 71.3
HPP92_026149 Vanilla planifolia HOM05D004421 ORTHO05D005227 4.5e-34 147.9 97 74.2
COL.COLO4_09709 Corchorus olitorius HOM05D004421 ORTHO05D005227 1.0e-33 146.7 107 70.1
Sp6g17090 Schrenkiella parvula HOM05D004421 ORTHO05D005227 1.0e-33 146.7 101 70.3
A05p12050 Brassica napus HOM05D004421 ORTHO05D005227 1.1e-32 143.3 102 70.6
A10p12420 Brassica napus HOM05D004421 ORTHO05D005227 1.1e-32 143.3 102 70.6
C09p45840 Brassica napus HOM05D004421 ORTHO05D005227 1.1e-32 143.3 102 70.6
BolC9t57441H Brassica oleracea HOM05D004421 ORTHO05D005227 1.1e-32 143.3 102 70.6
Os08g0110100 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 1.9e-32 142.5 103 70.9
Eucgr.B01013 Eucalyptus grandis HOM05D004421 ORTHO05D005227 9.4e-32 140.2 95 75.8
CSS0048822 Camellia sinensis var. sinensis HOM05D004421 ORTHO05D005227 1.7e-28 129.4 107 65.4
BcaC03g14260 Brassica carinata HOM05D004421 ORTHO05D005227 4.1e-27 124.8 81 74.1
TPR.G40166 Trifolium pratense HOM05D004421 ORTHO05D005227 2.0e-26 122.5 88 72.7
SEGI_06591 Sequoiadendron giganteum HOM05D004421 ORTHO05D005227 5.9e-26 120.9 104 57.7
BraA03t14310Z Brassica rapa HOM05D004421 ORTHO05D005227 3.8e-25 118.2 83 71.1
A08p21130 Brassica napus HOM05D004421 ORTHO05D005227 8.6e-25 117.1 83 71.1
vmacro12170 Vaccinium macrocarpon HOM05D004421 ORTHO05D005227 2.5e-24 115.5 82 74.4
Os06g0339800 Oryza sativa ssp. japonica HOM05D004421 ORTHO05D005227 5.5e-24 114.4 97 63.9
Lj2g0010759 Lotus japonicus HOM05D004421 ORTHO05D005227 7.2e-24 114.0 104 62.5
BcaC03g14258 Brassica carinata HOM05D004421 ORTHO05D005227 1.6e-23 112.8 87 66.7
Dinv22240 Davidia involucrata HOM05D004421 ORTHO05D005227 2.1e-23 112.5 66 84.8
FvH4_6g04610 Fragaria vesca HOM05D004421 ORTHO05D005227 1.5e-21 106.3 75 76.0
Mapoly0058s0042 Marchantia polymorpha HOM05D004421 ORTHO05D005227 9.8e-21 103.6 91 59.3
Migut.H01800 Erythranthe guttata HOM05D004421 ORTHO05D005227 1.1e-19 100.1 56 87.5
AagrBONN_evm.TU.Sc2ySwM_344.5034 Anthoceros agrestis HOM05D004421 ORTHO05D005227 1.4e-19 99.8 88 58.0
Eucgr.B01894 Eucalyptus grandis HOM05D004421 ORTHO05D005227 5.4e-19 97.8 65 73.8
Hma1.2p1_2381F.1_g321010 Hydrangea macrophylla HOM05D004421 ORTHO05D005227 5.4e-19 97.8 91 58.2
Pp3c26_2200 Physcomitrium patens HOM05D004421 ORTHO05D005227 3.8e-17 91.7 90 54.4
HanXRQChr16g0506671 Helianthus annuus HOM05D004421 ORTHO05D005227 4.7e-15 84.7 54 75.9
Potri.010G076275 Populus trichocarpa HOM05D004421 ORTHO05D005227 8.9e-14 80.5 79 57.0
GSVIVG01030492001 Vitis vinifera HOM05D004421 ORTHO05D005227 3.4e-13 78.6 56 69.6
RcHm_v2.0_Chr4g0419171 Rosa chinensis HOM05D004421 ORTHO05D005227 1.3e-12 76.6 109 44.0
MD09G1112900 Malus domestica HOM05D004421 ORTHO05D005227 6.4e-12 74.3 54 68.5
Manes.12G070801 Manihot esculenta HOM05D004421 ORTHO05D005227 3.2e-11 72.0 52 67.3
SMO172G0081 Selaginella moellendorffii HOM05D004421 ORTHO05D005227 3.2e-11 72.0 89 43.8
Nn2g15167 Nelumbo nucifera HOM05D004421 ORTHO05D005227 1.3e-09 66.6 44 75.0
Cre05.g234659 Chlamydomonas reinhardtii HOM05D004421 ORTHO05D005227 1.6e-07 59.7 85 43.5


User provided reference genes

Program Settings