Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 8.7e-232 806.6 405 100.0
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 9.5e-146 520.8 421 63.4
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 3.5e-140 502.3 419 61.8
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 3.8e-126 455.7 420 57.6
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.9e-115 419.1 422 51.9
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 8.2e-113 411.4 424 50.9
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.4e-112 410.6 420 50.0
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 4.0e-112 409.1 435 50.3
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 9.0e-112 407.9 420 51.2
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 4.5e-111 405.6 412 51.7
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 1.3e-110 404.1 420 50.7
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 1.1e-109 401.0 421 50.1
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.9e-109 400.2 420 50.5
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 9.3e-109 397.9 426 48.6
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 2.7e-108 396.4 418 50.5
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.9e-106 390.2 420 49.8
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.9e-106 390.2 420 49.8
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 2.8e-105 386.3 418 49.0
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.1e-104 384.4 421 48.2
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 6.9e-104 381.7 415 49.6
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 5.9e-103 378.6 421 48.7
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 7.6e-103 378.3 420 46.9
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 1.3e-102 377.5 425 47.3
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 3.8e-102 375.9 420 47.9
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.1e-101 374.4 420 47.9
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 9.4e-101 371.3 418 46.7
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.6e-100 370.5 420 46.7
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 1.6e-100 370.5 420 47.1
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 2.1e-100 370.2 420 46.7
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 2.7e-100 369.8 420 46.4
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 3.6e-100 369.4 430 47.2
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 3.6e-100 369.4 424 47.4
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 4.6e-100 369.0 423 45.6
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 7.9e-100 368.2 420 46.9
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.8e-99 367.1 424 45.3
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 5.1e-99 365.5 420 47.4
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.9e-98 363.6 416 48.1
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 5.7e-98 362.1 423 45.2
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 5.7e-98 362.1 420 46.9
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 7.4e-98 361.7 420 44.5
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 9.7e-98 361.3 415 46.7
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 1.8e-96 357.1 420 46.0
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.1e-96 356.3 416 46.9
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 6.9e-96 355.1 422 44.3
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 9.1e-96 354.8 422 45.7
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 4.5e-95 352.4 425 44.0
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 1.3e-94 350.9 420 44.3
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 1.1e-93 347.8 422 46.0
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.4e-93 347.4 377 49.6
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 1.2e-92 344.4 417 44.4
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 2.1e-92 343.6 416 44.0
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.6e-92 342.8 350 52.6
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 3.6e-92 342.8 392 47.2
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.0e-91 341.3 426 43.9
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 1.4e-91 340.9 428 42.3
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 1.8e-91 340.5 420 42.9
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 2.3e-91 340.1 388 45.1
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 3.0e-91 339.7 425 42.6
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 2.6e-90 336.7 427 41.7
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 1.7e-89 334.0 427 43.1
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.7e-89 334.0 428 41.6
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 1.7e-89 334.0 428 41.4
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 8.2e-89 331.6 427 42.2
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 8.2e-89 331.6 428 42.5
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.1e-88 331.3 399 43.9
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 3.1e-88 329.7 359 48.2
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 3.1e-88 329.7 427 41.5
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 4.5e-87 325.9 415 44.6
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 7.7e-87 325.1 360 45.3
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 5.0e-86 322.4 420 41.0
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 8.5e-86 321.6 420 43.3
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 3.2e-85 319.7 415 41.9
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 3.2e-85 319.7 416 44.0
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 7.2e-85 318.5 425 42.6
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 8.0e-84 315.1 420 41.0
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.4e-83 314.3 422 41.5
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 4.8e-81 305.8 345 47.2
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 5.3e-80 302.4 377 43.2
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 2.0e-79 300.4 307 49.5
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.0e-78 298.1 318 48.7
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.0e-78 295.8 321 46.4
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 4.7e-76 289.3 273 54.9
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.0e-75 288.1 419 39.1
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 6.7e-75 285.4 318 43.1
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 3.3e-74 283.1 374 41.7
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.2e-71 274.6 352 44.3
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.3e-70 271.2 416 38.7
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 2.5e-69 266.9 418 37.3
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 2.3e-67 260.4 328 44.2
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 1.3e-65 254.6 332 40.1
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 1.7e-62 244.2 401 38.9
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 2.9e-62 243.4 413 38.0
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 6.6e-62 242.3 296 44.9
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.5e-58 231.1 248 47.6
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.9e-48 197.6 246 40.7
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 7.3e-45 185.7 233 46.8
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 1.6e-44 184.5 231 48.9
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.1e-43 181.8 328 35.1
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 3.4e-42 176.8 322 33.9
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 3.4e-42 176.8 230 40.9
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 2.9e-41 173.7 402 32.6
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.1e-32 145.2 309 28.5
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 3.0e-30 137.1 370 29.2
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 5.6e-29 132.9 263 35.4
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 5.8e-18 96.3 82 62.2
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 5.8e-18 96.3 92 47.8
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.7e-17 94.7 162 33.3
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 5.8e-10 69.7 98 40.8
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 1.7e-09 68.2 92 35.9
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.1e-08 65.5 79 38.0
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 3.2e-08 63.9 50 58.0


User provided reference genes

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