Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14186 Striga asiatica HOM05D004061 ORTHO05D004693 1.7e-154 549.3 276 100.0
Migut.L01642 Erythranthe guttata HOM05D004061 ORTHO05D004693 1.4e-71 273.9 217 62.2
Oeu035162.1 Olea europaea HOM05D004061 ORTHO05D004693 6.0e-67 258.5 203 61.6
Rhsim05G0184700 Rhododendron simsii HOM05D004061 ORTHO05D004693 1.6e-64 250.4 211 59.2
vmacro20095 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 4.8e-64 248.8 195 60.5
unitig_8.g4322 Utricularia gibba HOM05D004061 ORTHO05D004693 5.3e-63 245.4 232 51.7
Peaxi162Scf00604g00010 Petunia axillaris HOM05D004061 ORTHO05D004693 9.0e-63 244.6 201 59.2
vmacro08681 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 1.2e-62 244.2 198 58.1
Actinidia05286 Actinidia chinensis HOM05D004061 ORTHO05D004693 7.6e-62 241.5 203 57.1
Nitab4.5_0006252g0020 Nicotiana tabacum HOM05D004061 ORTHO05D004693 2.2e-61 240.0 202 56.9
Lj3A975G70 Lonicera japonica HOM05D004061 ORTHO05D004693 3.8e-61 239.2 270 47.8
SalBow4G2839 Salvia bowleyana HOM05D004061 ORTHO05D004693 3.8e-61 239.2 284 45.4
Nitab4.5_0000643g0160 Nicotiana tabacum HOM05D004061 ORTHO05D004693 6.4e-61 238.4 202 56.9
Nitab4.5_0000202g0310 Nicotiana tabacum HOM05D004061 ORTHO05D004693 8.4e-61 238.0 218 56.0
MSTRG.19117 Avicennia marina HOM05D004061 ORTHO05D004693 1.1e-60 237.7 270 49.3
Solyc09g005960.4 Solanum lycopersicum HOM05D004061 ORTHO05D004693 1.1e-60 237.7 220 54.5
Cc06_g03260 Coffea canephora HOM05D004061 ORTHO05D004693 4.2e-60 235.7 217 54.8
Sopen09g001820 Solanum pennellii HOM05D004061 ORTHO05D004693 9.3e-60 234.6 220 54.1
ClCG04G008650 Citrullus lanatus HOM05D004061 ORTHO05D004693 6.0e-59 231.9 193 56.0
Lj2C103T21 Lonicera japonica HOM05D004061 ORTHO05D004693 7.9e-59 231.5 201 57.2
Ca_08806_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 3.0e-58 229.6 196 56.1
Medtr7g100150 Medicago truncatula HOM05D004061 ORTHO05D004693 3.3e-57 226.1 196 56.1
Peaxi162Scf00597g00310 Petunia axillaris HOM05D004061 ORTHO05D004693 3.3e-57 226.1 223 52.0
Potri.016G081900 Populus trichocarpa HOM05D004061 ORTHO05D004693 4.3e-57 225.7 194 55.2
VMungo1383G1764 Vigna mungo HOM05D004061 ORTHO05D004693 4.3e-57 225.7 199 55.8
CiPaw.10G139500 Carya illinoinensis HOM05D004061 ORTHO05D004693 5.6e-57 225.3 195 55.9
Manes.08G000500 Manihot esculenta HOM05D004061 ORTHO05D004693 5.6e-57 225.3 197 57.9
CiPaw.09G185500 Carya illinoinensis HOM05D004061 ORTHO05D004693 7.4e-57 224.9 195 55.4
Lj1g0024664 Lotus japonicus HOM05D004061 ORTHO05D004693 9.6e-57 224.6 221 51.6
PGSC0003DMG400011053 Solanum tuberosum HOM05D004061 ORTHO05D004693 1.6e-56 223.8 218 52.3
Solyc10g084500.1 Solanum lycopersicum HOM05D004061 ORTHO05D004693 2.1e-56 223.4 218 52.8
Sopen10g033930 Solanum pennellii HOM05D004061 ORTHO05D004693 2.1e-56 223.4 218 52.8
CAN.G435.5 Capsicum annuum HOM05D004061 ORTHO05D004693 2.8e-56 223.0 209 55.0
TAR633G1989 Trochodendron aralioides HOM05D004061 ORTHO05D004693 3.7e-56 222.6 198 53.5
unitig_578.g16044 Utricularia gibba HOM05D004061 ORTHO05D004693 3.7e-56 222.6 280 45.7
Duzib128G0701 Durio zibethinus HOM05D004061 ORTHO05D004693 6.2e-56 221.9 194 54.1
Psat0s1952g0040 Pisum sativum HOM05D004061 ORTHO05D004693 6.2e-56 221.9 204 53.9
TPR.G21459 Trifolium pratense HOM05D004061 ORTHO05D004693 1.4e-55 220.7 204 52.9
Cfa017465 Carpinus fangiana HOM05D004061 ORTHO05D004693 5.3e-55 218.8 186 58.1
ECA248G1662 Erigeron canadensis HOM05D004061 ORTHO05D004693 5.3e-55 218.8 201 56.2
HanXRQChr11g0349611 Helianthus annuus HOM05D004061 ORTHO05D004693 5.3e-55 218.8 206 53.4
Nn2g12823 Nelumbo nucifera HOM05D004061 ORTHO05D004693 6.9e-55 218.4 193 55.4
QL07p045968 Quercus lobata HOM05D004061 ORTHO05D004693 6.9e-55 218.4 194 53.6
HanXRQChr13g0392181 Helianthus annuus HOM05D004061 ORTHO05D004693 9.0e-55 218.0 202 55.0
Sed0004679 Sechium edule HOM05D004061 ORTHO05D004693 2.0e-54 216.9 192 52.6
CANSAT80G1299 Cannabis sativa HOM05D004061 ORTHO05D004693 3.4e-54 216.1 193 56.0
Lsat_1_v5_gn_1_54740 Lactuca sativa HOM05D004061 ORTHO05D004693 3.4e-54 216.1 206 54.9
Lalb_Chr25g0289361 Lupinus albus HOM05D004061 ORTHO05D004693 4.5e-54 215.7 203 52.2
Haze_20694 Corylus avellana HOM05D004061 ORTHO05D004693 5.8e-54 215.3 222 50.0
Glyma.03G175700 Glycine max HOM05D004061 ORTHO05D004693 1.0e-53 214.5 198 51.5
arahy.Tifrunner.gnm1.ann1.Y28VT2 Arachis hypogaea HOM05D004061 ORTHO05D004693 2.9e-53 213.0 192 54.2
Glyma.19G176300 Glycine max HOM05D004061 ORTHO05D004693 2.9e-53 213.0 215 50.2
Aa31LG10G9640 Aethionema arabicum HOM05D004061 ORTHO05D004693 1.1e-52 211.1 208 50.0
GSVIVG01025578001 Vitis vinifera HOM05D004061 ORTHO05D004693 1.1e-52 211.1 194 53.1
TWI74G1169 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 1.9e-52 210.3 193 54.4
Ciclev10012656m.g Citrus clementina HOM05D004061 ORTHO05D004693 2.5e-52 209.9 197 53.3
Os03g0282800 Oryza sativa ssp. japonica HOM05D004061 ORTHO05D004693 3.2e-52 209.5 193 51.8
Thecc.05G049300 Theobroma cacao HOM05D004061 ORTHO05D004693 3.2e-52 209.5 194 56.7
ATR0594G174 Amborella trichopoda HOM05D004061 ORTHO05D004693 4.2e-52 209.1 196 50.5
arahy.Tifrunner.gnm1.ann1.9VFE0J Arachis hypogaea HOM05D004061 ORTHO05D004693 4.2e-52 209.1 200 54.0
Lalb_Chr20g0113041 Lupinus albus HOM05D004061 ORTHO05D004693 5.5e-52 208.8 203 51.2
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.2e-51 207.6 195 51.8
arahy.Tifrunner.gnm1.ann1.6R95LH Arachis hypogaea HOM05D004061 ORTHO05D004693 2.1e-51 206.8 200 53.5
Duzib093G0371 Durio zibethinus HOM05D004061 ORTHO05D004693 3.5e-51 206.1 194 52.6
Glyma.13G134900 Glycine max HOM05D004061 ORTHO05D004693 3.5e-51 206.1 189 52.4
TWI77G0888 Tripterygium wilfordii HOM05D004061 ORTHO05D004693 4.6e-51 205.7 195 52.8
PSO384G5009 Papaver somniferum HOM05D004061 ORTHO05D004693 6.0e-51 205.3 206 51.0
Sabra16G0089600 Salix brachista HOM05D004061 ORTHO05D004693 1.3e-50 204.1 236 43.6
arahy.Tifrunner.gnm1.ann1.H9GTJP Arachis hypogaea HOM05D004061 ORTHO05D004693 2.3e-50 203.4 219 48.4
Thhalv10010698m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 2.3e-50 203.4 189 51.9
PSO339G1720 Papaver somniferum HOM05D004061 ORTHO05D004693 2.3e-50 203.4 206 51.0
MBI05_g22082_MAGBIO Magnolia biondii HOM05D004061 ORTHO05D004693 3.0e-50 203.0 193 50.3
Sp5g08850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 6.7e-50 201.8 189 51.9
PSO699G0012 Papaver somniferum HOM05D004061 ORTHO05D004693 8.7e-50 201.4 214 46.7
CDE07G0262 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 1.1e-49 201.1 195 52.3
Phvul.007G161100 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 1.1e-49 201.1 189 51.9
Gorai.001G248900 Gossypium raimondii HOM05D004061 ORTHO05D004693 1.9e-49 200.3 203 52.2
C06p21460 Brassica napus HOM05D004061 ORTHO05D004693 3.3e-49 199.5 194 50.5
CARHR163390 Cardamine hirsuta HOM05D004061 ORTHO05D004693 3.3e-49 199.5 189 50.8
Cpa.g.sc114.23 Carica papaya HOM05D004061 ORTHO05D004693 3.3e-49 199.5 190 51.6
Glyma.10G046900 Glycine max HOM05D004061 ORTHO05D004693 3.3e-49 199.5 189 51.3
Nn2g10562 Nelumbo nucifera HOM05D004061 ORTHO05D004693 4.3e-49 199.1 191 49.7
Sc20g0004290 Simmondsia chinensis HOM05D004061 ORTHO05D004693 4.3e-49 199.1 196 54.1
THA.LOC104806513 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 9.7e-49 198.0 211 48.3
EL10Ac7g17278 Beta vulgaris HOM05D004061 ORTHO05D004693 1.3e-48 197.6 190 53.2
BolC6t37328H Brassica oleracea HOM05D004061 ORTHO05D004693 1.3e-48 197.6 194 50.5
Carub.0005s2006 Capsella rubella HOM05D004061 ORTHO05D004693 1.3e-48 197.6 189 51.3
Sed0004085 Sechium edule HOM05D004061 ORTHO05D004693 1.3e-48 197.6 190 50.5
AT3G53490 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 2.8e-48 196.4 189 50.8
AUR62044395 Chenopodium quinoa HOM05D004061 ORTHO05D004693 2.8e-48 196.4 193 51.8
BcaC08g44627 Brassica carinata HOM05D004061 ORTHO05D004693 4.8e-48 195.7 194 50.0
AL5G34410 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 6.3e-48 195.3 189 51.3
BraA07t29848Z Brassica rapa HOM05D004061 ORTHO05D004693 6.3e-48 195.3 194 50.5
MELO3C003083.2 Cucumis melo HOM05D004061 ORTHO05D004693 1.1e-47 194.5 195 50.3
Gohir.D13G097300 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.1e-47 194.5 203 50.7
Aqoxy4G03101 Aquilegia oxysepala HOM05D004061 ORTHO05D004693 1.4e-47 194.1 190 49.5
Gohir.A01G218200 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.8e-47 193.7 196 53.6
Gohir.A13G095435 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.8e-47 193.7 201 50.7
Phvul.001G172800 Phaseolus vulgaris HOM05D004061 ORTHO05D004693 4.1e-47 192.6 199 50.3
A07p21670 Brassica napus HOM05D004061 ORTHO05D004693 6.9e-47 191.8 194 50.5
Lj5g0017469 Lotus japonicus HOM05D004061 ORTHO05D004693 6.9e-47 191.8 189 48.7
CsaV3_4G024510 Cucumis sativus L. HOM05D004061 ORTHO05D004693 9.0e-47 191.4 195 48.7
HPP92_006587 Vanilla planifolia HOM05D004061 ORTHO05D004693 9.0e-47 191.4 194 49.0
Gohir.D01G207100 Gossypium hirsutum HOM05D004061 ORTHO05D004693 1.2e-46 191.0 224 49.1
MD04G1110000 Malus domestica HOM05D004061 ORTHO05D004693 1.5e-46 190.7 213 47.9
MD12G1131500 Malus domestica HOM05D004061 ORTHO05D004693 1.5e-46 190.7 212 49.5
Hund12072 Selenicereus undatus HOM05D004061 ORTHO05D004693 2.0e-46 190.3 199 51.8
Dinv35674 Davidia involucrata HOM05D004061 ORTHO05D004693 5.9e-46 188.7 158 54.4
Atru.chr8.2505 Acer truncatum HOM05D004061 ORTHO05D004693 7.7e-46 188.3 195 53.3
Dinv35675 Davidia involucrata HOM05D004061 ORTHO05D004693 1.0e-45 188.0 126 66.7
Aa31LG10G9670 Aethionema arabicum HOM05D004061 ORTHO05D004693 2.9e-45 186.4 182 49.5
Prupe.6G245800 Prunus persica HOM05D004061 ORTHO05D004693 2.9e-45 186.4 197 49.7
HPP92_015408 Vanilla planifolia HOM05D004061 ORTHO05D004693 5.0e-45 185.7 213 47.4
Gorai.002G252200 Gossypium raimondii HOM05D004061 ORTHO05D004693 6.5e-45 185.3 224 48.7
PGR004G1528 Punica granatum HOM05D004061 ORTHO05D004693 9.4e-44 181.4 192 50.0
Oeu049603.1 Olea europaea HOM05D004061 ORTHO05D004693 2.7e-43 179.9 142 61.3
SMO164G0167 Selaginella moellendorffii HOM05D004061 ORTHO05D004693 6.1e-43 178.7 208 48.6
SHI12648 Sapria himalayana HOM05D004061 ORTHO05D004693 1.4e-42 177.6 200 47.0
Ah.08g212360 Amaranthus hybridus HOM05D004061 ORTHO05D004693 3.9e-42 176.0 189 51.9
Medtr1g067320 Medicago truncatula HOM05D004061 ORTHO05D004693 5.1e-42 175.6 189 45.0
BolC4t25479H Brassica oleracea HOM05D004061 ORTHO05D004693 2.0e-41 173.7 189 45.5
C04p39050 Brassica napus HOM05D004061 ORTHO05D004693 2.5e-41 173.3 189 45.5
FvH4_6g14800 Fragaria vesca HOM05D004061 ORTHO05D004693 3.3e-41 172.9 194 47.4
FAN14G1560 Fragaria x ananassa HOM05D004061 ORTHO05D004693 3.3e-41 172.9 194 47.4
RcHm_v2.0_Chr3g0468021 Rosa chinensis HOM05D004061 ORTHO05D004693 3.3e-41 172.9 194 46.4
Pp3c2_4500 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.7e-40 170.6 193 45.1
BcaC02g09159 Brassica carinata HOM05D004061 ORTHO05D004693 2.8e-40 169.9 189 47.1
FAN05G3362 Fragaria x ananassa HOM05D004061 ORTHO05D004693 2.8e-40 169.9 194 45.9
Psat6g069360 Pisum sativum HOM05D004061 ORTHO05D004693 1.1e-39 167.9 188 43.6
Ca_11436_v3 Cicer arietinum L. HOM05D004061 ORTHO05D004693 1.8e-39 167.2 193 44.6
BraA04t16312Z Brassica rapa HOM05D004061 ORTHO05D004693 4.1e-39 166.0 193 46.6
FAN02G3315 Fragaria x ananassa HOM05D004061 ORTHO05D004693 6.9e-39 165.2 194 46.4
TPR.G7552 Trifolium pratense HOM05D004061 ORTHO05D004693 6.9e-39 165.2 190 43.7
VMungo0720G0415 Vigna mungo HOM05D004061 ORTHO05D004693 6.9e-39 165.2 239 38.9
A04p06100 Brassica napus HOM05D004061 ORTHO05D004693 2.0e-38 163.7 193 46.1
Carub.0006s0148 Capsella rubella HOM05D004061 ORTHO05D004693 3.4e-38 162.9 202 42.1
Sp6g39850 Schrenkiella parvula HOM05D004061 ORTHO05D004693 5.9e-38 162.2 200 42.0
Lalb_Chr01g0019101 Lupinus albus HOM05D004061 ORTHO05D004693 2.9e-37 159.8 203 43.3
AT5G02720 Arabidopsis thaliana HOM05D004061 ORTHO05D004693 8.5e-37 158.3 200 41.0
Pp3c17_20730 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.4e-36 157.5 197 43.1
Pp3c17_20731 Physcomitrium patens HOM05D004061 ORTHO05D004693 1.4e-36 157.5 197 43.1
THA.LOC104816298 Tarenaya hassleriana HOM05D004061 ORTHO05D004693 3.2e-36 156.4 200 42.0
Dinv37231 Davidia involucrata HOM05D004061 ORTHO05D004693 5.5e-36 155.6 190 44.7
HPP92_026988 Vanilla planifolia HOM05D004061 ORTHO05D004693 5.5e-36 155.6 189 45.0
A10p32990 Brassica napus HOM05D004061 ORTHO05D004693 2.7e-35 153.3 212 39.2
AagrBONN_evm.TU.Sc2ySwM_117.2779 Anthoceros agrestis HOM05D004061 ORTHO05D004693 1.0e-34 151.4 193 42.5
BolC9t60131H Brassica oleracea HOM05D004061 ORTHO05D004693 3.0e-34 149.8 203 41.4
BraA10t45336Z Brassica rapa HOM05D004061 ORTHO05D004693 3.0e-34 149.8 200 40.0
BcaNung03280 Brassica carinata HOM05D004061 ORTHO05D004693 8.8e-34 148.3 203 40.9
Mapoly0179s0007 Marchantia polymorpha HOM05D004061 ORTHO05D004693 2.0e-33 147.1 226 37.6
PSO675G5312 Papaver somniferum HOM05D004061 ORTHO05D004693 2.6e-33 146.7 131 54.2
CBR_g49836 Chara braunii HOM05D006172 ORTHO05D004693 1.4e-28 131.0 151 48.3
Aqoxy4G03086 Aquilegia oxysepala HOM05D003496 ORTHO05D003909 1.9e-28 130.6 213 36.2
AUR62042140 Chenopodium quinoa HOM05D004061 ORTHO05D004693 2.1e-27 127.1 135 47.4
COL.COLO4_10313 Corchorus olitorius HOM05D004061 ORTHO05D004693 2.1e-27 127.1 137 51.8
BcaB02g08525 Brassica carinata HOM05D004061 ORTHO05D004693 2.3e-26 123.6 156 42.3
ATR0594G139 Amborella trichopoda HOM05D004061 ORTHO05D004693 1.8e-23 114.0 171 36.3
SEGI_28610 Sequoiadendron giganteum HOM05D004061 ORTHO05D004693 2.4e-23 113.6 145 42.8
C09p73960 Brassica napus HOM05D004061 ORTHO05D004693 1.2e-19 101.3 200 32.5
BcaC06g32007 Brassica carinata HOM05D004061 ORTHO05D004693 4.7e-19 99.4 201 34.3
Thhalv10016063m.g Eutrema salsugineum HOM05D004061 ORTHO05D004693 1.0e-18 98.2 142 38.7
AL6G11960 Arabidopsis lyrata HOM05D004061 ORTHO05D004693 1.4e-18 97.8 142 38.0
Zm00001eb397300 Zea mays HOM05D004061 ORTHO05D004693 9.7e-17 91.7 105 43.8
ATR0594G136 Amborella trichopoda HOM05D004061 ORTHO05D004693 7.7e-14 82.0 154 33.1
BcaB02g07781 Brassica carinata HOM05D004061 ORTHO05D004693 3.8e-13 79.7 52 69.2
vmacro08682 Vaccinium macrocarpon HOM05D004061 ORTHO05D004693 3.2e-12 76.6 69 52.2
CARHR210670 Cardamine hirsuta HOM05D004061 ORTHO05D004693 3.0e-10 70.1 57 56.1
Zm00001eb012900 Zea mays HOM05D004061 ORTHO05D004693 7.5e-09 65.5 76 47.4
Zm00001eb131400 Zea mays HOM05D004061 ORTHO05D001113 4.8e-08 62.8 61 45.9
BolC3t12673H Brassica oleracea HOM05D004061 ORTHO05D004693 2.4e-07 60.5 107 31.8
Zm00001eb346430 Zea mays HOM05D004061 ORTHO05D004693 3.1e-07 60.1 61 42.6
Zm00001eb341480 Zea mays HOM05D014943 ORTHO05D019389 7.0e-07 58.9 61 42.6


User provided reference genes

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