Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 4.0e-149 531.6 296 100.0
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 7.9e-49 198.4 337 43.9
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 1.4e-45 187.6 326 47.9
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 5.5e-42 175.6 293 43.0
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 9.1e-37 158.3 313 38.0
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 3.8e-35 152.9 292 39.0
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 8.5e-35 151.8 318 38.1
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.5e-34 151.0 287 38.3
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 2.5e-34 150.2 330 37.6
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 2.1e-33 147.1 300 37.3
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 6.1e-33 145.6 302 37.1
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 4.0e-32 142.9 282 36.5
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 5.2e-32 142.5 293 36.9
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 6.3e-30 135.6 303 37.6
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 6.3e-30 135.6 275 39.6
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 5.3e-29 132.5 278 35.6
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 5.3e-29 132.5 277 37.2
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 4.5e-28 129.4 296 34.8
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 7.7e-28 128.6 278 34.5
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.0e-27 128.3 278 34.5
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 2.2e-27 127.1 294 36.7
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 3.8e-27 126.3 266 35.7
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 1.1e-26 124.8 292 38.0
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 2.5e-26 123.6 278 36.3
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 3.2e-26 123.2 281 36.7
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 3.2e-26 123.2 275 35.6
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 4.2e-26 122.9 267 36.7
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 4.7e-25 119.4 200 41.5
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 2.3e-24 117.1 291 33.3
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 3.0e-24 116.7 281 40.6
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 8.8e-24 115.2 284 39.8
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 2.0e-23 114.0 290 39.7
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 2.0e-23 114.0 282 35.1
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 4.4e-23 112.8 290 33.4
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 5.7e-23 112.5 291 36.4
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 9.8e-23 111.7 282 35.1
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 9.8e-23 111.7 291 34.7
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 1.7e-22 110.9 287 36.6
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 3.7e-22 109.8 274 33.2
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 4.8e-22 109.4 279 33.3
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 6.3e-22 109.0 296 31.4
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 3.1e-21 106.7 274 33.2
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.1e-21 106.7 283 32.2
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 4.1e-21 106.3 285 31.9
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 9.1e-21 105.1 279 32.3
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.6e-20 104.4 267 32.2
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 4.5e-20 102.8 283 31.8
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 4.5e-20 102.8 259 36.7
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 7.7e-20 102.1 281 37.0
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 1.3e-19 101.3 274 30.7
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 2.3e-19 100.5 277 30.7
Actinidia19731 Actinidia chinensis HOM05D004973 ORTHO05D006119 5.0e-19 99.4 291 32.0
CAN.G867.2 Capsicum annuum HOM05D004973 ORTHO05D006119 5.0e-19 99.4 247 34.4
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 6.5e-19 99.0 321 31.8
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 3.2e-18 96.7 278 36.0
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 4.2e-18 96.3 278 36.3
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 1.2e-17 94.7 277 33.9
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 2.8e-17 93.6 89 60.7
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 3.6e-17 93.2 89 56.2
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 3.6e-17 93.2 103 50.5
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 4.7e-17 92.8 164 42.1
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 4.7e-17 92.8 244 33.6
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 4.7e-17 92.8 307 30.9
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 6.1e-17 92.4 286 32.9
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 6.1e-17 92.4 298 32.9
Phvul.007G161600 Phaseolus vulgaris HOM05D004973 ORTHO05D006119 6.1e-17 92.4 297 35.0
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 1.0e-16 91.7 89 52.8
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 1.4e-16 91.3 285 29.5
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 1.8e-16 90.9 83 61.4
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 3.0e-16 90.1 299 31.4
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 3.0e-16 90.1 89 56.2
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 4.0e-16 89.7 87 54.0
Nitab4.5_0007045g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.6e-15 87.0 237 30.0
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 4.4e-15 86.3 89 50.6
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 5.7e-15 85.9 286 29.7
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 2.8e-14 83.6 89 52.8
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 2.8e-14 83.6 82 53.7
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 2.8e-14 83.6 225 32.9
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 3.7e-14 83.2 81 56.8
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 4.9e-14 82.8 293 29.0
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 4.9e-14 82.8 275 35.3
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 1.4e-13 81.3 265 37.0
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 1.4e-13 81.3 89 51.7
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 1.4e-13 81.3 260 33.8
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 1.8e-13 80.9 158 37.3
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 4.1e-13 79.7 283 30.4
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 7.0e-13 79.0 71 60.6
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 9.2e-13 78.6 86 54.7
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 9.2e-13 78.6 83 54.2
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 1.2e-12 78.2 273 28.9
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 1.2e-12 78.2 84 57.1
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 1.6e-12 77.8 85 50.6
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 1.6e-12 77.8 278 30.6
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 2.7e-12 77.0 105 46.7
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 4.5e-12 76.3 89 50.6
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 4.5e-12 76.3 89 50.6
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 4.5e-12 76.3 78 55.1
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 7.8e-12 75.5 73 58.9
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 1.0e-11 75.1 72 58.3
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 1.3e-11 74.7 78 53.8
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 1.7e-11 74.3 125 40.8
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 2.9e-11 73.6 71 56.3
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 3.8e-11 73.2 78 52.6
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 5.0e-11 72.8 78 53.8
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 5.0e-11 72.8 89 48.3
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 5.0e-11 72.8 151 37.7
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 6.6e-11 72.4 149 37.6
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 6.6e-11 72.4 72 54.2
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 6.6e-11 72.4 72 54.2
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 8.6e-11 72.0 157 36.9
CAN.G608.34 Capsicum annuum HOM05D004973 ORTHO05D006119 1.5e-10 71.2 239 33.1
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 1.5e-10 71.2 78 53.8
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 1.9e-10 70.9 70 57.1
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.5e-10 70.5 154 35.7
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 4.3e-10 69.7 82 53.7
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 7.3e-10 68.9 65 58.5
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 9.5e-10 68.6 70 52.9
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 9.5e-10 68.6 71 54.9
RhsimUnG0120800 Rhododendron simsii HOM05D004973 ORTHO05D006119 1.2e-09 68.2 233 29.2
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 1.6e-09 67.8 65 58.5
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 2.1e-09 67.4 90 47.8
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 3.6e-09 66.6 92 45.7
MSTRG.19123 Avicennia marina HOM05D004973 ORTHO05D006119 4.7e-09 66.2 75 54.7
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 6.1e-09 65.9 145 48.3
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 6.1e-09 65.9 83 47.0
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 8.0e-09 65.5 278 27.3
Sed0025194 Sechium edule HOM05D004973 ORTHO05D006119 8.0e-09 65.5 89 42.7
CsaV3_3G035290 Cucumis sativus L. HOM05D004973 ORTHO05D006119 1.8e-08 64.3 280 27.9
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 2.3e-08 63.9 80 50.0
arahy.Tifrunner.gnm1.ann1.X85SHR Arachis hypogaea HOM05D004973 ORTHO05D006119 8.9e-08 62.0 64 54.7
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 1.2e-07 61.6 159 31.4
Lalb_Chr02g0153461 Lupinus albus HOM05D004973 ORTHO05D006119 2.0e-07 60.8 95 45.3
arahy.Tifrunner.gnm1.ann1.4HMS3J Arachis hypogaea HOM05D004973 ORTHO05D006119 2.6e-07 60.5 64 53.1
ClCG10G020720 Citrullus lanatus HOM05D004973 ORTHO05D006119 4.9e-06 56.2 289 26.3


User provided reference genes

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