Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 1.4e-72 276.2 137 100.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 7.4e-50 200.7 137 73.7
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 7.2e-45 184.1 139 71.2
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 2.1e-44 182.6 145 64.1
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 3.0e-43 178.7 145 64.8
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 3.3e-42 175.3 137 65.0
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 7.4e-42 174.1 135 68.1
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 2.2e-41 172.6 143 64.3
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 3.7e-41 171.8 118 72.9
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 4.8e-41 171.4 148 62.2
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 4.8e-41 171.4 119 71.4
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 8.2e-41 170.6 146 61.6
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.1e-40 170.2 143 63.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 1.1e-40 170.2 148 62.2
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 1.4e-40 169.9 137 63.5
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 2.4e-40 169.1 142 64.1
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.4e-40 169.1 138 63.8
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 4.1e-40 168.3 115 75.7
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 5.3e-40 167.9 118 67.8
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 9.1e-40 167.2 138 65.2
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.2e-39 166.8 141 64.5
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.2e-39 166.8 109 75.2
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 2.0e-39 166.0 109 74.3
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 2.0e-39 166.0 145 60.7
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 3.4e-39 165.2 138 65.2
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 3.4e-39 165.2 151 59.6
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 4.5e-39 164.9 150 58.7
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 4.5e-39 164.9 117 67.5
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 7.7e-39 164.1 169 55.0
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 1.0e-38 163.7 118 66.9
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 1.7e-38 162.9 136 64.7
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 2.2e-38 162.5 120 70.0
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 2.9e-38 162.2 132 64.4
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.5e-38 160.6 90 84.4
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 1.1e-37 160.2 140 62.9
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.9e-37 159.5 87 86.2
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 1.9e-37 159.5 109 73.4
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 2.5e-37 159.1 138 60.1
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 3.2e-37 158.7 141 64.5
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 3.2e-37 158.7 138 64.5
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 3.2e-37 158.7 148 58.1
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 4.2e-37 158.3 144 63.9
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 5.5e-37 157.9 113 72.6
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 5.5e-37 157.9 137 57.7
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 9.4e-37 157.1 109 73.4
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 1.2e-36 156.8 139 63.3
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 1.2e-36 156.8 141 65.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 1.6e-36 156.4 91 81.3
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 1.6e-36 156.4 139 63.3
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.1e-36 156.0 140 63.6
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 4.7e-36 154.8 139 64.0
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 6.1e-36 154.5 135 60.7
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 6.1e-36 154.5 135 60.7
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 6.1e-36 154.5 144 58.3
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 6.1e-36 154.5 107 71.0
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 7.9e-36 154.1 120 68.3
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 1.8e-35 152.9 88 80.7
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 2.3e-35 152.5 91 81.3
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.3e-35 152.5 115 67.0
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.0e-35 152.1 143 60.1
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.0e-35 152.1 117 65.8
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 5.1e-35 151.4 90 82.2
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 5.1e-35 151.4 145 57.2
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 8.8e-35 150.6 88 79.5
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.5e-34 149.8 94 77.7
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.5e-34 149.8 91 76.9
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 2.0e-34 149.4 133 57.9
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 2.6e-34 149.1 110 67.3
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.3e-34 148.7 141 58.2
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 3.3e-34 148.7 122 66.4
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 4.4e-34 148.3 108 67.6
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 9.7e-34 147.1 116 67.2
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 1.7e-33 146.4 114 64.9
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 1.7e-33 146.4 110 66.4
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 2.8e-33 145.6 134 62.7
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 2.8e-33 145.6 145 58.6
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.8e-33 145.6 87 78.2
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 3.7e-33 145.2 136 56.6
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 4.8e-33 144.8 92 73.9
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 1.8e-32 142.9 91 79.1
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 2.4e-32 142.5 141 56.7
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 9.1e-32 140.6 91 75.8
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 9.1e-32 140.6 141 56.0
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.5e-31 139.8 113 63.7
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 2.6e-31 139.0 79 79.7
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 4.5e-31 138.3 132 58.3
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 4.5e-31 138.3 132 58.3
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 7.7e-31 137.5 88 76.1
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 3.2e-29 132.1 74 81.1
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 2.1e-28 129.4 69 84.1
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 4.7e-28 128.3 71 80.3
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 1.0e-27 127.1 127 56.7
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 2.6e-26 122.5 66 81.8
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.9e-23 111.3 91 57.1
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 1.7e-22 109.8 92 63.0
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 1.1e-21 107.1 91 63.7
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 1.8e-16 89.7 71 60.6
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 1.5e-13 80.1 96 45.8
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 9.4e-13 77.4 100 43.0
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 6.1e-12 74.7 46 71.7
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.5e-10 70.1 81 40.7
Actinidia19720 Actinidia chinensis HOM05D007368 ORTHO05D009330 4.5e-07 58.5 89 46.1
Dinv35698 Davidia involucrata HOM05D007368 ORTHO05D009330 5.0e-06 55.1 30 90.0


User provided reference genes

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