Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14150 Striga asiatica HOM05D000187 ORTHO05D005916 4.2e-209 731.1 370 100.0
SGA_v2.0_scaffold452G51848 Striga asiatica HOM05D000187 ORTHO05D005916 1.1e-66 258.1 381 46.7
MSTRG.19149 Avicennia marina HOM05D000187 ORTHO05D005916 2.8e-59 233.4 407 40.3
MSTRG.5732 Avicennia marina HOM05D000187 ORTHO05D005916 4.0e-58 229.6 409 38.6
Migut.L01674 Erythranthe guttata HOM05D000187 ORTHO05D005916 2.2e-56 223.8 410 38.5
SalBow3G2812 Salvia bowleyana HOM05D000187 ORTHO05D005916 4.3e-52 209.5 408 37.5
Migut.J00432 Erythranthe guttata HOM05D000187 ORTHO05D005916 1.3e-48 198.0 397 39.5
SGA_v2.0_scaffold126G33919 Striga asiatica HOM05D000187 ORTHO05D005916 8.1e-43 178.7 420 36.7
Cc06_g03760 Coffea canephora HOM05D000187 ORTHO05D005916 5.3e-42 176.0 413 33.4
Oeu001343.2 Olea europaea HOM05D000187 ORTHO05D005916 2.0e-41 174.1 387 35.1
Oeu060098.1 Olea europaea HOM05D000187 ORTHO05D005916 4.9e-40 169.5 376 36.4
Peaxi162Scf00343g00019 Petunia axillaris HOM05D000187 ORTHO05D005916 7.4e-36 155.6 413 33.7
Dinv35741 Davidia involucrata HOM05D000187 ORTHO05D005916 3.7e-35 153.3 405 33.6
Sopen09g002400 Solanum pennellii HOM05D000187 ORTHO05D005916 3.1e-34 150.2 418 32.8
Solyc09g007530.3 Solanum lycopersicum HOM05D000187 ORTHO05D005916 9.0e-34 148.7 418 32.5
Thecc.05G057000 Theobroma cacao HOM05D000187 ORTHO05D005916 1.2e-33 148.3 419 31.5
Lj2A110G55 Lonicera japonica HOM05D000187 ORTHO05D005916 2.9e-32 143.7 387 35.4
GSVIVG01025655001 Vitis vinifera HOM05D000187 ORTHO05D005916 8.4e-32 142.1 417 32.6
Nitab4.5_0000669g0040 Nicotiana tabacum HOM05D000187 ORTHO05D005916 1.9e-31 141.0 418 31.1
PGSC0003DMG400001775 Solanum tuberosum HOM05D000187 ORTHO05D005916 7.1e-31 139.0 413 31.5
CiPaw.09G178000 Carya illinoinensis HOM05D000187 ORTHO05D005916 3.5e-30 136.7 417 31.9
Ciclev10011412m.g Citrus clementina HOM05D000187 ORTHO05D005916 4.6e-30 136.3 418 30.1
QL07p044805 Quercus lobata HOM05D000187 ORTHO05D005916 6.0e-30 136.0 417 30.5
Glyma.19G180000 Glycine max HOM05D000187 ORTHO05D005916 1.0e-29 135.2 419 30.5
Duzib128G0619 Durio zibethinus HOM05D000187 ORTHO05D005916 1.9e-28 131.0 419 30.3
Glyma.13G138700 Glycine max HOM05D000187 ORTHO05D005916 1.9e-28 131.0 413 28.6
Gorai.006G167700 Gossypium raimondii HOM05D000187 ORTHO05D005916 1.9e-28 131.0 416 29.3
RcHm_v2.0_Chr3g0469341 Rosa chinensis HOM05D000187 ORTHO05D005916 2.5e-28 130.6 420 31.0
MD04G1100800 Malus domestica HOM05D000187 ORTHO05D005916 9.6e-28 128.6 413 30.3
Nitab4.5_0008126g0010 Nicotiana tabacum HOM05D000187 ORTHO05D005916 9.6e-28 128.6 403 31.8
Prupe.6G238800 Prunus persica HOM05D000187 ORTHO05D005916 9.6e-28 128.6 417 31.4
Atru.chr8.1885 Acer truncatum HOM05D000187 ORTHO05D005916 1.6e-27 127.9 419 30.8
Duzib093G0363 Durio zibethinus HOM05D000187 ORTHO05D005916 2.1e-27 127.5 419 28.6
Gohir.D09G146500 Gossypium hirsutum HOM05D000187 ORTHO05D005916 2.1e-27 127.5 416 28.8
Duzib106G1386 Durio zibethinus HOM05D000187 ORTHO05D005916 4.8e-27 126.3 413 30.3
CSS0014211 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 6.3e-27 125.9 405 32.6
TAR636G0951 Trochodendron aralioides HOM05D000187 ORTHO05D005916 6.3e-27 125.9 420 32.1
MD12G1120500 Malus domestica HOM05D000187 ORTHO05D005916 8.2e-27 125.6 414 31.6
Gohir.A09G150900 Gossypium hirsutum HOM05D000187 ORTHO05D005916 2.4e-26 124.0 413 28.8
TAR633G0001 Trochodendron aralioides HOM05D000187 ORTHO05D005916 3.1e-26 123.6 417 31.2
AUR62040492 Chenopodium quinoa HOM05D000187 ORTHO05D005916 4.1e-26 123.2 409 27.9
AUR62042546 Chenopodium quinoa HOM05D000187 ORTHO05D005916 1.2e-25 121.7 411 28.2
EL10Ac7g16533 Beta vulgaris HOM05D000187 ORTHO05D005916 2.6e-25 120.6 410 27.6
Manes.08G005200 Manihot esculenta HOM05D000187 ORTHO05D005916 3.4e-25 120.2 418 29.4
Lalb_Chr20g0112811 Lupinus albus HOM05D000187 ORTHO05D005916 4.5e-25 119.8 408 28.9
Glyma.10G051200 Glycine max HOM05D000187 ORTHO05D005916 5.9e-25 119.4 407 28.3
Lj1g0027469 Lotus japonicus HOM05D000187 ORTHO05D005916 5.9e-25 119.4 419 28.6
Phvul.001G176000 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 7.6e-25 119.0 418 29.4
COL.COLO4_27046 Corchorus olitorius HOM05D000187 ORTHO05D005916 1.3e-24 118.2 354 31.4
Phvul.007G221700 Phaseolus vulgaris HOM05D000187 ORTHO05D005916 1.3e-24 118.2 422 27.7
VMungo0720G2148 Vigna mungo HOM05D000187 ORTHO05D005916 5.0e-24 116.3 429 27.5
Ca_08834_v3 Cicer arietinum L. HOM05D000187 ORTHO05D005916 6.5e-24 115.9 429 29.4
FAN05G1888 Fragaria x ananassa HOM05D000187 ORTHO05D005916 2.5e-23 114.0 433 30.0
FAN14G0677 Fragaria x ananassa HOM05D000187 ORTHO05D005916 2.5e-23 114.0 433 30.3
FvH4_6g15650 Fragaria vesca HOM05D000187 ORTHO05D005916 4.2e-23 113.2 433 30.0
Lalb_Chr01g0018951 Lupinus albus HOM05D000187 ORTHO05D005916 9.3e-23 112.1 403 28.0
Hund20201 Selenicereus undatus HOM05D000187 ORTHO05D005916 1.2e-22 111.7 410 28.5
VMungo1383G3362 Vigna mungo HOM05D000190 ORTHO05D005916 1.0e-21 108.6 419 28.2
FAN02G4435 Fragaria x ananassa HOM05D000187 ORTHO05D005916 1.3e-21 108.2 425 29.4
Manes.08G004121 Manihot esculenta HOM05D000187 ORTHO05D005916 3.0e-21 107.1 353 31.2
Glyma.03G179300 Glycine max HOM05D000187 ORTHO05D005916 1.1e-20 105.1 419 28.9
Manes.08G004128 Manihot esculenta HOM05D000187 ORTHO05D005916 1.5e-20 104.8 353 30.9
Medtr1g066400 Medicago truncatula HOM05D000187 ORTHO05D005916 4.3e-20 103.2 400 29.8
PGR142G2245 Punica granatum HOM05D000187 ORTHO05D005916 4.3e-20 103.2 427 26.7
Manes.08G004116 Manihot esculenta HOM05D000187 ORTHO05D005916 9.7e-20 102.1 353 30.6
Manes.08G004122 Manihot esculenta HOM05D000187 ORTHO05D005916 9.7e-20 102.1 353 30.6
Medtr7g100950 Medicago truncatula HOM05D000187 ORTHO05D005916 9.7e-20 102.1 431 27.4
ECA233G1295 Erigeron canadensis HOM05D000187 ORTHO05D005916 1.3e-19 101.7 370 27.8
Manes.08G004106 Manihot esculenta HOM05D000187 ORTHO05D005916 1.3e-19 101.7 353 30.6
Haze_20619 Corylus avellana HOM05D000187 ORTHO05D005916 1.6e-19 101.3 363 32.2
THA.LOC104806500 Tarenaya hassleriana HOM05D000187 ORTHO05D005916 1.6e-19 101.3 391 28.4
Actinidia13093 Actinidia chinensis HOM05D000187 ORTHO05D005916 9.0e-18 95.5 376 30.1
TPR.G18272 Trifolium pratense HOM05D000187 ORTHO05D005916 1.2e-17 95.1 413 27.4
CARHR131660 Cardamine hirsuta HOM05D000187 ORTHO05D005916 3.4e-17 93.6 220 32.7
vmacro08722 Vaccinium macrocarpon HOM05D000187 ORTHO05D005916 2.9e-16 90.5 386 32.4
Psat3g044680 Pisum sativum HOM05D000187 ORTHO05D005916 1.9e-15 87.8 440 25.7
Manes.08G004902 Manihot esculenta HOM05D000187 ORTHO05D005916 3.2e-15 87.0 327 29.7
ECA248G0617 Erigeron canadensis HOM05D000187 ORTHO05D005916 7.2e-15 85.9 374 26.7
Actinidia05261 Actinidia chinensis HOM05D000187 ORTHO05D005916 1.6e-14 84.7 390 28.2
AT2G37150 Arabidopsis thaliana HOM05D000187 ORTHO05D005916 1.6e-14 84.7 225 32.0
Ah.08g211860 Amaranthus hybridus HOM05D000187 ORTHO05D005916 2.7e-14 84.0 200 33.0
Cpa.g.sc45.53 Carica papaya HOM05D000187 ORTHO05D005916 2.7e-14 84.0 366 26.5
AL4G33500 Arabidopsis lyrata HOM05D000187 ORTHO05D005916 5.1e-13 79.7 368 26.9
Sc20g0005150 Simmondsia chinensis HOM05D000187 ORTHO05D005916 8.8e-13 79.0 408 26.0
Nn2g13049 Nelumbo nucifera HOM05D000187 ORTHO05D005916 3.3e-12 77.0 421 25.2
PSO339G2442 Papaver somniferum HOM05D000187 ORTHO05D005916 3.3e-12 77.0 426 24.6
PSO339G0454 Papaver somniferum HOM05D000187 ORTHO05D005916 7.4e-12 75.9 440 27.3
PSO063G1315 Papaver somniferum HOM05D000187 ORTHO05D005916 9.7e-12 75.5 438 24.7
Sc02g0001880 Simmondsia chinensis HOM05D000187 ORTHO05D005916 3.7e-11 73.6 310 27.1
PSO384G1161 Papaver somniferum HOM05D000187 ORTHO05D005916 1.1e-10 72.0 430 27.9
BcaB06g28980 Brassica carinata HOM05D000187 ORTHO05D005916 1.8e-10 71.2 252 31.3
Aa31LG5G22440 Aethionema arabicum HOM05D000187 ORTHO05D005916 2.4e-10 70.9 418 26.3
Thhalv10016485m.g Eutrema salsugineum HOM05D000187 ORTHO05D005916 2.4e-10 70.9 378 25.7
Potri.010G220700 Populus trichocarpa HOM05D000187 ORTHO05D005916 5.3e-10 69.7 396 27.5
C03p24070 Brassica napus HOM05D000187 ORTHO05D005916 6.9e-10 69.3 225 28.9
Lsat_1_v5_gn_6_30401 Lactuca sativa HOM05D000187 ORTHO05D005916 1.2e-09 68.6 367 27.2
CSS0024672 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 3.4e-09 67.0 414 26.3
CSS0009934 Camellia sinensis var. sinensis HOM05D000187 ORTHO05D005916 1.0e-08 65.5 424 26.4
C04p65710 Brassica napus HOM05D000187 ORTHO05D005916 1.3e-08 65.1 395 28.9
Dinv11787 Davidia involucrata HOM05D000187 ORTHO05D005916 1.3e-08 65.1 406 26.4
Sabra10G0170500 Salix brachista HOM05D000187 ORTHO05D005916 1.3e-08 65.1 388 27.6
HanXRQChr11g0349931 Helianthus annuus HOM05D000187 ORTHO05D005916 2.2e-08 64.3 377 26.5
HanXRQChr13g0399681 Helianthus annuus HOM05D000187 ORTHO05D005916 2.2e-08 64.3 268 28.7
Sp4g19460 Schrenkiella parvula HOM05D000187 ORTHO05D005916 3.8e-08 63.5 410 23.4
BolC3t14799H Brassica oleracea HOM05D000187 ORTHO05D005916 5.0e-08 63.2 349 25.8
BraA04t18318Z Brassica rapa HOM05D000187 ORTHO05D005916 6.5e-08 62.8 385 27.5
BcaC02g07546 Brassica carinata HOM05D000187 ORTHO05D005916 8.5e-08 62.4 389 28.3
BolC4t28072H Brassica oleracea HOM05D000187 ORTHO05D005916 8.5e-08 62.4 389 28.3
A03p20470 Brassica napus HOM05D000187 ORTHO05D005916 1.4e-07 61.6 371 25.6
BraA03t11290Z Brassica rapa HOM05D000187 ORTHO05D005916 1.6e-06 58.2 376 27.1
Dinv31334 Davidia involucrata HOM05D000187 ORTHO05D005916 2.1e-06 57.8 408 24.0
Sabra08G0028000 Salix brachista HOM05D000187 ORTHO05D005916 2.1e-06 57.8 423 25.8
Potri.008G041201 Populus trichocarpa HOM05D000187 ORTHO05D005916 4.7e-06 56.6 346 28.0
TWI63G0123 Tripterygium wilfordii HOM05D000187 ORTHO05D005916 4.7e-06 56.6 228 28.9
GSVIVG01016299001 Vitis vinifera HOM05D000187 ORTHO05D005916 6.1e-06 56.2 345 25.8


User provided reference genes

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