Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold35G14138 Striga asiatica HOM05D008585 ORTHO05D000397 8.0e-76 287.0 140 100.0
SGA_v2.0_scaffold3G01660 Striga asiatica HOM05D008585 ORTHO05D000397 4.3e-61 238.0 127 89.8
SGA_v2.0_scaffold5G03055 Striga asiatica HOM05D008585 ORTHO05D000397 9.8e-58 226.9 126 86.5
SGA_v2.0_scaffold491G52433 Striga asiatica HOM05D008585 ORTHO05D000397 4.1e-56 221.5 126 83.3
SGA_v2.0_scaffold148G36401 Striga asiatica HOM05D008585 ORTHO05D000397 7.1e-56 220.7 126 84.1
SGA_v2.0_scaffold16G07582 Striga asiatica HOM05D008585 ORTHO05D000397 4.6e-55 218.0 127 81.9
SGA_v2.0_scaffold18G08386 Striga asiatica HOM05D008585 ORTHO05D000397 7.8e-55 217.2 129 80.6
SGA_v2.0_scaffold9G04779 Striga asiatica HOM05D008585 ORTHO05D000397 1.0e-54 216.9 127 81.9
SGA_v2.0_scaffold448G51779 Striga asiatica HOM05D008585 ORTHO05D000397 6.6e-54 214.2 127 80.3
SGA_v2.0_scaffold61G21229 Striga asiatica HOM05D008585 ORTHO05D000397 1.8e-51 206.1 114 86.0
SGA_v2.0_scaffold152G36821 Striga asiatica HOM05D008585 ORTHO05D000397 1.7e-46 189.5 120 75.0
SGA_v2.0_scaffold164G38150 Striga asiatica HOM05D008585 ORTHO05D000397 5.8e-42 174.5 92 91.3
SGA_v2.0_scaffold63G21779 Striga asiatica HOM05D008585 ORTHO05D000397 1.7e-41 172.9 127 66.9
SGA_v2.0_scaffold41G15715 Striga asiatica HOM05D008585 ORTHO05D000397 2.4e-40 169.1 123 66.7
SGA_v2.0_scaffold304G47894 Striga asiatica HOM05D008585 ORTHO05D000397 4.6e-39 164.9 123 62.6
SGA_v2.0_scaffold162G37930 Striga asiatica HOM05D008585 ORTHO05D000397 1.0e-38 163.7 109 74.3
SGA_v2.0_scaffold12G06039 Striga asiatica HOM05D008585 ORTHO05D000397 1.3e-38 163.3 123 63.4
SGA_v2.0_scaffold137G35092 Striga asiatica HOM05D008585 ORTHO05D000397 3.9e-38 161.8 123 63.4
SGA_v2.0_scaffold148G36424 Striga asiatica HOM05D008585 ORTHO05D000397 6.6e-38 161.0 123 62.6
SGA_v2.0_scaffold91G28036 Striga asiatica HOM05D008585 ORTHO05D000397 4.8e-36 154.8 117 64.1
SGA_v2.0_scaffold449G51795 Striga asiatica HOM05D008585 ORTHO05D000397 1.4e-35 153.3 111 66.7
SGA_v2.0_scaffold91G28089 Striga asiatica HOM05D008585 ORTHO05D000397 5.5e-24 114.8 123 47.2
SGA_v2.0_scaffold65G22152 Striga asiatica HOM05D008585 ORTHO05D000397 9.3e-24 114.0 123 46.3
SGA_v2.0_scaffold21G09322 Striga asiatica HOM05D008585 ORTHO05D000397 6.0e-23 111.3 78 62.8
SGA_v2.0_scaffold5241G54611 Striga asiatica HOM05D008585 ORTHO05D000397 4.9e-17 91.7 50 84.0
Oeu041493.2 Olea europaea HOM05D008585 ORTHO05D000397 6.7e-14 81.3 103 42.7
Oeu064355.1 Olea europaea HOM05D008585 ORTHO05D000397 6.7e-14 81.3 103 42.7
Ciclev10003531m.g Citrus clementina HOM05D002262 ORTHO05D000482 1.3e-12 77.0 105 39.0
Nitab4.5_0000924g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 6.9e-11 71.2 123 28.5
Nitab4.5_0001863g0140 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.2e-10 70.5 101 33.7
Oeu029820.1 Olea europaea HOM05D008585 ORTHO05D000397 1.5e-10 70.1 94 42.6
Oeu058706.1 Olea europaea HOM05D008585 ORTHO05D000397 1.5e-10 70.1 94 42.6
SGA_v2.0_scaffold152G36827 Striga asiatica HOM05D008585 ORTHO05D000397 1.5e-10 70.1 55 58.2
Oeu000023.2 Olea europaea HOM05D002262 ORTHO05D000482 3.4e-10 68.9 85 36.5
Nitab4.5_0000477g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.2e-09 66.2 101 32.7
Nitab4.5_0005016g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-09 65.5 129 31.0
Nitab4.5_0013676g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 3.8e-09 65.5 101 30.7
Nitab4.5_0011961g0030 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.1e-08 63.9 88 34.1
Nitab4.5_0001896g0020 Nicotiana tabacum HOM05D005063 ORTHO05D000482 1.4e-08 63.5 101 30.7
Nitab4.5_0002279g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.5e-08 62.8 101 29.7
Oeu005447.1 Olea europaea HOM05D006164 ORTHO05D001269 2.5e-08 62.8 102 35.3
Nitab4.5_0002951g0070 Nicotiana tabacum HOM05D005063 ORTHO05D000482 4.2e-08 62.0 101 29.7
SGA_v2.0_scaffold281G46892 Striga asiatica HOM05D011754 ORTHO05D014689 5.5e-08 61.6 41 63.4
Nitab4.5_0003911g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 9.3e-08 60.8 89 31.5
Nitab4.5_0003111g0010 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.1e-07 59.7 128 25.0
Oeu021073.1 Olea europaea HOM05D006164 ORTHO05D001269 2.1e-07 59.7 100 32.0
Nitab4.5_0001927g0040 Nicotiana tabacum HOM05D005063 ORTHO05D000482 2.7e-07 59.3 101 28.7
Oeu039421.1 Olea europaea HOM05D006164 ORTHO05D001269 2.7e-07 59.3 100 32.0
CAN.G1169.9 Capsicum annuum HOM05D005063 ORTHO05D000482 6.1e-07 58.2 101 29.7
HanXRQChr04g0099511 Helianthus annuus HOM05D010915 ORTHO05D010404 1.8e-06 56.6 87 33.3
CANSAT35G1168 Cannabis sativa HOM05D002262 ORTHO05D000482 3.0e-06 55.8 83 34.9
CANSAT54G0857 Cannabis sativa HOM05D002262 ORTHO05D000482 3.0e-06 55.8 83 34.9
CANSAT54G1872 Cannabis sativa HOM05D002262 ORTHO05D000482 3.0e-06 55.8 83 34.9
CANSAT54G1962 Cannabis sativa HOM05D009344 ORTHO05D001269 3.9e-06 55.5 66 43.9
HanXRQChr04g0099521 Helianthus annuus HOM05D010915 ORTHO05D010404 5.1e-06 55.1 107 32.7
Nitab4.5_0012202g0030 Nicotiana tabacum HOM05D005063 ORTHO05D010498 5.1e-06 55.1 73 32.9
CANSAT11G2391 Cannabis sativa HOM05D009344 ORTHO05D001269 6.7e-06 54.7 63 44.4
CANSAT54G1637 Cannabis sativa HOM05D009344 ORTHO05D001269 8.7e-06 54.3 76 39.5
CANSAT56G2811 Cannabis sativa HOM05D002262 ORTHO05D000482 8.7e-06 54.3 83 33.7
Nitab4.5_0000227g0060 Nicotiana tabacum HOM05D005063 ORTHO05D000482 8.7e-06 54.3 73 31.5


User provided reference genes

Program Settings